FFCP PHASE1:Hg19::chr10:111768654..111768687,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:111768654..111768687,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_at_chr10:111768654..111768687,+ | |description=CAGE_peak_at_chr10:111768654..111768687,+ | ||
|id=chr10:111768654..111768687,+ | |id=chr10:111768654..111768687,+ | ||
|ontology_enrichment_celltype=CL:0000542!8.93e-27!53;CL:0000051!8.93e-27!53;CL:0000838!2.64e-26!52;CL:0000738!3.97e-20!140;CL:0002087!1.92e-19!119;CL:0000037!1.90e-18!172;CL:0000566!1.90e-18!172;CL:0000988!1.97e-17!182;CL:0002032!1.10e-16!165;CL:0000837!1.10e-16!165;CL:0002031!1.20e-16!124;CL:0000084!2.06e-14!25;CL:0000827!2.06e-14!25;CL:0000791!1.03e-13!18;CL:0000789!1.03e-13!18;CL:0002420!1.03e-13!18;CL:0002419!1.03e-13!18;CL:0000790!1.03e-13!18;CL:0000945!3.19e-11!24;CL:0000826!3.19e-11!24;CL:0000625!5.42e-09!11;CL:0000236!3.32e-07!14 | |ontology_enrichment_celltype=CL:0000542!8.93e-27!53;CL:0000051!8.93e-27!53;CL:0000838!2.64e-26!52;CL:0000738!3.97e-20!140;CL:0002087!1.92e-19!119;CL:0000037!1.90e-18!172;CL:0000566!1.90e-18!172;CL:0000988!1.97e-17!182;CL:0002032!1.10e-16!165;CL:0000837!1.10e-16!165;CL:0002031!1.20e-16!124;CL:0000084!2.06e-14!25;CL:0000827!2.06e-14!25;CL:0000791!1.03e-13!18;CL:0000789!1.03e-13!18;CL:0002420!1.03e-13!18;CL:0002419!1.03e-13!18;CL:0000790!1.03e-13!18;CL:0000945!3.19e-11!24;CL:0000826!3.19e-11!24;CL:0000625!5.42e-09!11;CL:0000236!3.32e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000084;7.31e-30;25!CL:0000791;5.13e-28;18!CL:0000789;5.13e-28;18!CL:0002419;5.13e-28;18!CL:0000542;1.08e-27;53!CL:0000625;1.02e-17;11!CL:0000945;1.08e-15;24!CL:0000236;6.99e-11;13!CL:0000624;1.14e-10;6!CL:0000094;2.89e-08;8!CL:0002087;5.62e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.74e-49,53;CL:0000051,2.74e-49,53;CL:0000838,2.90e-48,52;CL:0000084,7.98e-30,25;CL:0000827,7.98e-30,25;CL:0000738,4.23e-29,136;CL:0000791,5.25e-28,18;CL:0000789,5.25e-28,18;CL:0002420,5.25e-28,18;CL:0002419,5.25e-28,18;CL:0000790,5.25e-28,18;CL:0002087,3.54e-26,115;CL:0000037,1.06e-21,168;CL:0002031,1.19e-20,120;CL:0000988,1.95e-20,177;CL:0002032,1.77e-19,161;CL:0000837,1.77e-19,161;CL:0000625,1.03e-17,11;CL:0000945,4.73e-16,24;CL:0000826,4.73e-16,24;CL:0000624,1.15e-10,6;CL:0000236,2.80e-10,14;CL:0000094,3.33e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;5.13e-28;18!CL:0000051;1.08e-27;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.45e-10!15;UBERON:0000179!4.45e-10!15;UBERON:0000463!4.45e-10!15 | |ontology_enrichment_uberon=UBERON:0000178!4.45e-10!15;UBERON:0000179!4.45e-10!15;UBERON:0000463!4.45e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-16;15!UBERON:0000179;3.55e-16;15!UBERON:0000463;3.55e-16;15!UBERON:0002390;3.55e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.17e-16,15;UBERON:0000179,3.17e-16,15;UBERON:0000463,3.17e-16,15;UBERON:0002370,7.60e-07,4;UBERON:0005058,7.60e-07,4;UBERON:0009113,7.60e-07,4;UBERON:0003295,7.60e-07,4;UBERON:0005562,7.60e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0.125542639594803,1.68109492645493,1.39571002064908,1.81034797021462,2.36018566109342,6.90892916574983,1.23852898652861,0.919421224478927,0,0,2.32401601740905,0.426507697462265,0.587200878669695,3.32397245119126,3.00816671205213,3.47217393145363,0.223915474239924,1.6194683300949,0,0.290796477559129,0.377875943688809,0,0.464858073811369,0,0.309706370895104,0.575384784644301,0.256160706529101,0,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0.449446968890169,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0.217188844705117,0,0.368277635987565,0.316462387440884,1.05627643155971,0,0.209658645508376,0.561643155732475,0.300353785683013,0.964353520182481,0.855038231223746,0.19891667719909,0.91332076882317,3.51992488922645,3.27683166757279,4.44754626931777,2.98711155796555,2.40237592221607,1.72425731986345,2.64417949113945,1.90810750907073,1.70763890732835,5.28513470433845,0.764546456250458,0,2.24203425192614,0.263384084775077,24.785431034343,13.3623659334716,13.9809019319666,48.6512701586873,41.392127862466,27.4599727326145,35.068811113424,27.8526142212934,32.4066498222321,28.3563385067035,46.8490684313477,16.0114149657094,17.6880712681434,6.9063919933544,5.52700035571697,23.7638530302743,44.189395822294,56.1835738988397,44.95027523614,21.7553937979327,23.7596706033191,20.2740192834752,31.6274615024379,21.9810135883627,18.8814201618361,18.0585888445191,31.9219252444878,34.556385011693,13.742379920758,27.939715741194,11.4957919568947,16.5317529444281,10.9650480271238,13.3238451572175,2.43806866313962,3.35350429851818,0.383587685530591,0,0.50133791063589,0,0,0,0.0945348171640679,0.665188192387692,0.087834785693126,0,0,0.370784442784429,3.24547393654683,1.91542711029194,0.797747763113191,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0.402829317109147,0.760272105718513,1.70843440283719,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.25326102332916,0.662045904066094,0.860509862246441,0.354668382198357,0,0,0.24666754841716,1.24484414159907,1.88594940897563,0.817309515567294,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,1.02088964844019,0.358779271377724,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0,0.286804595389004,0.609868530647977,0.397589304964456,0.580969714347592,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0.723033089650446,0.330881918197182,0.435758888184812,0.237270619111097,0.404493924480493,0.196221465125346,0,1.4763109092493,0,0,0,0,0,0,1.32438929824395,0.614942192715568,0,0.109750285408626,0,0,0.925884451585296,0,0,1.44331342025273,0,0.117408694235822,0.577465791044295,0.925971025153221,2.28304982681518,0,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,1.05658120815871,0,0.432359860250884,0.25248486685276,0,0,0,0,0.308482478109971,0.300343057843917,0.571652865261156,0,0.43596006883328,0.4400297149257,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,4.37132061574756,15.5654300559523,10.3501235932568,10.7808150474989,0,0,0,0,0,4.49404214368309,8.97484377612075,6.63064821497657,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,18.6091223510599,12.7271378482984,11.8467589161823,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0,0,1.46139224653261,0,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0.877039506583738,0.522870902049801,0.256450125116389,0,0.325378394664303,0.309123034943167,0.183138929636687,0.082509499920588,0.574265537996172,0,0,0,0.308097234229289,0.307007349452259,0,0.214840489736547,0,0.170453254832202,0,0,0,0.510450849978337,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0.715624433709956,0.372158369359667,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.92947049429925,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,15.2234282769651,12.9988325214204,11.9625909306574,15.9615289556719,18.9226645619649,13.6179395350471,14.5808488054291,7.13812658664843,0.854592569019785,0,0.735120647943095,1.48642540100575,0.432807638929335,2.20539714380084,1.11598390910176,0.59873811429845,0.383010740264733,2.11673582723883,0.324621940274555,0,0,0.156679895773023,2.50634477090067,0.846458889008016,0.1605880751037,0.605399121573143,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0.606802608747567,2.34031106982705,0,0,1.48482340416319,0.614321404198464,0.994147647766298,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| ||
|short_description=p@chr10:111768654..111768687,+ | |short_description=p@chr10:111768654..111768687,+ | ||
}} | }} |
Latest revision as of 10:19, 23 July 2015
Short description: | p@chr10:111768654..111768687, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:111768654..111768687, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.74e-49 | 53 |
common lymphoid progenitor | 2.74e-49 | 53 |
lymphoid lineage restricted progenitor cell | 2.90e-48 | 52 |
T cell | 7.98e-30 | 25 |
pro-T cell | 7.98e-30 | 25 |
leukocyte | 4.23e-29 | 136 |
mature alpha-beta T cell | 5.25e-28 | 18 |
alpha-beta T cell | 5.25e-28 | 18 |
immature T cell | 5.25e-28 | 18 |
mature T cell | 5.25e-28 | 18 |
immature alpha-beta T cell | 5.25e-28 | 18 |
nongranular leukocyte | 3.54e-26 | 115 |
hematopoietic stem cell | 1.06e-21 | 168 |
hematopoietic lineage restricted progenitor cell | 1.19e-20 | 120 |
hematopoietic cell | 1.95e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.77e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-19 | 161 |
CD8-positive, alpha-beta T cell | 1.03e-17 | 11 |
lymphocyte of B lineage | 4.73e-16 | 24 |
pro-B cell | 4.73e-16 | 24 |
CD4-positive, alpha-beta T cell | 1.15e-10 | 6 |
B cell | 2.80e-10 | 14 |
granulocyte | 3.33e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 3.17e-16 | 15 |
haemolymphatic fluid | 3.17e-16 | 15 |
organism substance | 3.17e-16 | 15 |
thymus | 7.60e-07 | 4 |
hemolymphoid system gland | 7.60e-07 | 4 |
thymic region | 7.60e-07 | 4 |
pharyngeal gland | 7.60e-07 | 4 |
thymus primordium | 7.60e-07 | 4 |