FFCP PHASE1:Hg19::chr15:93443539..93443580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1106 | |EntrezGene=1106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1917 | |HGNC=1917 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IP5,O14647 | |UniProt=Q96IP5,O14647 | ||
|association_with_transcript=0bp_to_ENST00000309818,ENST00000420239,ENST00000554771,NM_001042572,NM_001271,uc002bsn.2,uc002bso.1,uc002bsp.2_5end | |association_with_transcript=0bp_to_ENST00000309818,ENST00000420239,ENST00000554771,NM_001042572,NM_001271,uc002bsn.2,uc002bso.1,uc002bsp.2_5end | ||
|cluster_id=chr15:93443539..93443580,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_CHD2_5end | |description=CAGE_peak_1_at_CHD2_5end | ||
|id=chr15:93443539..93443580,+ | |id=chr15:93443539..93443580,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.82e-43!140;CL:0002031!2.72e-34!124;CL:0000037!9.04e-32!172;CL:0000566!9.04e-32!172;CL:0002087!1.27e-31!119;CL:0002032!1.23e-28!165;CL:0000837!1.23e-28!165;CL:0000988!1.03e-27!182;CL:0000766!1.66e-22!76;CL:0002057!1.83e-22!42;CL:0000860!2.82e-22!45;CL:0000557!3.33e-19!71;CL:0000839!1.69e-18!70;CL:0002009!4.68e-17!65;CL:0002194!6.50e-16!63;CL:0000576!6.50e-16!63;CL:0000040!6.50e-16!63;CL:0000559!6.50e-16!63;CL:0000763!1.11e-14!112;CL:0000049!1.11e-14!112;CL:0000838!3.85e-14!52;CL:0000542!5.67e-14!53;CL:0000051!5.67e-14!53;CL:0000791!2.20e-10!18;CL:0000789!2.20e-10!18;CL:0002420!2.20e-10!18;CL:0002419!2.20e-10!18;CL:0000790!2.20e-10!18;CL:0000084!3.11e-07!25;CL:0000827!3.11e-07!25;CL:0000094!6.85e-07!8;CL:0000625!7.52e-07!11;CL:0000236!8.98e-07!14;CL:0000945!9.19e-07!24;CL:0000826!9.19e-07!24 | |ontology_enrichment_celltype=CL:0000738!2.82e-43!140;CL:0002031!2.72e-34!124;CL:0000037!9.04e-32!172;CL:0000566!9.04e-32!172;CL:0002087!1.27e-31!119;CL:0002032!1.23e-28!165;CL:0000837!1.23e-28!165;CL:0000988!1.03e-27!182;CL:0000766!1.66e-22!76;CL:0002057!1.83e-22!42;CL:0000860!2.82e-22!45;CL:0000557!3.33e-19!71;CL:0000839!1.69e-18!70;CL:0002009!4.68e-17!65;CL:0002194!6.50e-16!63;CL:0000576!6.50e-16!63;CL:0000040!6.50e-16!63;CL:0000559!6.50e-16!63;CL:0000763!1.11e-14!112;CL:0000049!1.11e-14!112;CL:0000838!3.85e-14!52;CL:0000542!5.67e-14!53;CL:0000051!5.67e-14!53;CL:0000791!2.20e-10!18;CL:0000789!2.20e-10!18;CL:0002420!2.20e-10!18;CL:0002419!2.20e-10!18;CL:0000790!2.20e-10!18;CL:0000084!3.11e-07!25;CL:0000827!3.11e-07!25;CL:0000094!6.85e-07!8;CL:0000625!7.52e-07!11;CL:0000236!8.98e-07!14;CL:0000945!9.19e-07!24;CL:0000826!9.19e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.79e-17;33!CL:0002057;5.79e-17;33!CL:0000576;3.49e-13;48!CL:0000473;1.83e-12;39!CL:0000234;1.83e-12;39!CL:0002087;1.06e-11;104!CL:0000766;7.83e-11;69!CL:0000791;2.17e-10;18!CL:0000789;2.17e-10;18!CL:0002419;2.17e-10;18!CL:0000738;5.00e-09;136!CL:0000542;5.12e-08;53!CL:0000084;3.05e-07;25!CL:0000094;6.84e-07;8!CL:0000625;7.42e-07;11!CL:0000236;8.00e-07;13!CL:0000945;9.77e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.21e-43,136;CL:0002031,2.26e-34,120;CL:0002087,1.08e-31,115;CL:0000037,1.26e-31,168;CL:0002032,1.73e-28,161;CL:0000837,1.73e-28,161;CL:0000988,2.76e-28,177;CL:0000766,1.04e-22,72;CL:0000860,1.83e-22,42;CL:0002057,1.83e-22,42;CL:0000473,5.08e-20,48;CL:0000234,5.08e-20,48;CL:0000557,2.34e-19,67;CL:0000839,1.22e-18,66;CL:0002009,3.38e-17,61;CL:0002194,4.91e-16,59;CL:0000576,4.91e-16,59;CL:0000040,4.91e-16,59;CL:0000559,4.91e-16,59;CL:0000763,1.51e-14,108;CL:0000049,1.51e-14,108;CL:0000838,3.85e-14,52;CL:0000542,5.67e-14,53;CL:0000051,5.67e-14,53;CL:0000791,2.20e-10,18;CL:0000789,2.20e-10,18;CL:0002420,2.20e-10,18;CL:0002419,2.20e-10,18;CL:0000790,2.20e-10,18;CL:0000084,3.11e-07,25;CL:0000827,3.11e-07,25;CL:0000094,6.85e-07,8;CL:0000625,7.52e-07,11;CL:0000236,8.98e-07,14;CL:0000945,9.19e-07,24;CL:0000826,9.19e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-16;42!CL:0000790;2.17e-10;18!CL:0000051;5.12e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.79e-23!102;UBERON:0003061!6.79e-23!102;UBERON:0002193!2.00e-21!112;UBERON:0002371!1.82e-15!80;UBERON:0001474!6.42e-14!86;UBERON:0002405!2.81e-12!115;UBERON:0004765!9.21e-11!101;UBERON:0001434!9.21e-11!101;UBERON:0000178!5.74e-07!15;UBERON:0000179!5.74e-07!15;UBERON:0000463!5.74e-07!15;UBERON:0007023!6.14e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!6.79e-23!102;UBERON:0003061!6.79e-23!102;UBERON:0002193!2.00e-21!112;UBERON:0002371!1.82e-15!80;UBERON:0001474!6.42e-14!86;UBERON:0002405!2.81e-12!115;UBERON:0004765!9.21e-11!101;UBERON:0001434!9.21e-11!101;UBERON:0000178!5.74e-07!15;UBERON:0000179!5.74e-07!15;UBERON:0000463!5.74e-07!15;UBERON:0007023!6.14e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.79e-07;15!UBERON:0000179;5.79e-07;15!UBERON:0000463;5.79e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.48e-23,98;UBERON:0003061,6.48e-23,98;UBERON:0002193,2.24e-21,108;UBERON:0002405,5.70e-16,93;UBERON:0002371,1.87e-15,76;UBERON:0001474,7.55e-14,82;UBERON:0004765,1.46e-12,90;UBERON:0001434,3.59e-10,100;UBERON:0000178,5.74e-07,15;UBERON:0000179,5.74e-07,15;UBERON:0000463,5.74e-07,15;UBERON:0007023,8.27e-07,114 | |||
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| ||
|short_description=p1@CHD2 | |short_description=p1@CHD2 | ||
}} | }} |
Latest revision as of 23:17, 19 September 2015
Short description: | p1@CHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000309818, ENST00000420239, ENST00000554771, NM_001042572, NM_001271, uc002bsn.2, uc002bso.1, uc002bsp.2_5end |
EntrezGene: | CHD2 |
HGNC: | 1917 |
UniProt: | Q96IP5O14647 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.48e-23 | 98 |
blood island | 6.48e-23 | 98 |
hemolymphoid system | 2.24e-21 | 108 |
immune system | 5.70e-16 | 93 |
bone marrow | 1.87e-15 | 76 |
bone element | 7.55e-14 | 82 |
skeletal element | 1.46e-12 | 90 |
skeletal system | 3.59e-10 | 100 |
blood | 5.74e-07 | 15 |
haemolymphatic fluid | 5.74e-07 | 15 |
organism substance | 5.74e-07 | 15 |
adult organism | 8.27e-07 | 114 |