FFCP PHASE1:Hg19::chr17:38613501..38613547,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38613501..38613547,+ | |||
|coexpression_cluster_id=C353 | |coexpression_cluster_id=C353 | ||
|description=CAGE_peak_at_chr17:38613501..38613547,+ | |description=CAGE_peak_at_chr17:38613501..38613547,+ | ||
|id=chr17:38613501..38613547,+ | |id=chr17:38613501..38613547,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.78e-25!180;CL:0000183!3.17e-18!59;CL:0000680!1.13e-17!57;CL:0000056!1.13e-17!57;CL:0000355!1.13e-17!57;CL:0000222!1.27e-16!119;CL:0000187!2.68e-16!54;CL:0000057!1.86e-14!75;CL:0000192!9.54e-14!42;CL:0000514!9.54e-14!42;CL:0000393!3.33e-13!60;CL:0000211!3.33e-13!60;CL:0000359!1.85e-10!32;CL:0002334!5.34e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.78e-25!180;CL:0000183!3.17e-18!59;CL:0000680!1.13e-17!57;CL:0000056!1.13e-17!57;CL:0000355!1.13e-17!57;CL:0000222!1.27e-16!119;CL:0000187!2.68e-16!54;CL:0000057!1.86e-14!75;CL:0000192!9.54e-14!42;CL:0000514!9.54e-14!42;CL:0000393!3.33e-13!60;CL:0000211!3.33e-13!60;CL:0000359!1.85e-10!32;CL:0002334!5.34e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.29e-09;12!CL:0000192;2.59e-09;43!CL:0000187;4.34e-09;55!CL:0000359;6.63e-08;32!CL:0000393;1.47e-07;61!CL:0000211;1.47e-07;61!CL:0002494;1.70e-07;16!CL:0000499;1.93e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.61e-17,58;CL:0000056,3.61e-17,58;CL:0000355,3.61e-17,58;CL:0000187,2.24e-15,55;CL:0000057,5.04e-14,76;CL:0000048,7.22e-13,427;CL:0000393,1.27e-12,61;CL:0000211,1.27e-12,61;CL:0000192,1.31e-12,43;CL:0000514,1.31e-12,43;CL:0000723,4.00e-12,433;CL:0000034,3.53e-11,441;CL:0000222,1.12e-10,121;CL:0002334,1.76e-09,12;CL:0000359,3.03e-08,32;CL:0000499,1.26e-07,28;CL:0002494,3.94e-07,16;CL:0000136,8.63e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000355;1.93e-09;58!CL:0000514;2.59e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.59e-19!143;UBERON:0002100!1.98e-17!216;UBERON:0000914!2.55e-17!83;UBERON:0002329!2.55e-17!83;UBERON:0003077!2.55e-17!83;UBERON:0003059!2.55e-17!83;UBERON:0007282!2.55e-17!83;UBERON:0009618!2.55e-17!83;UBERON:0007285!2.55e-17!83;UBERON:0001134!2.65e-16!61;UBERON:0002036!2.65e-16!61;UBERON:0003082!2.65e-16!61;UBERON:0002385!3.38e-16!63;UBERON:0001015!3.38e-16!63;UBERON:0000383!3.38e-16!63;UBERON:0004290!5.01e-16!70;UBERON:0004872!3.63e-15!84;UBERON:0003914!4.48e-15!118;UBERON:0000490!9.21e-15!138;UBERON:0000486!9.75e-15!82;UBERON:0002049!2.27e-13!79;UBERON:0007798!2.27e-13!79;UBERON:0001009!4.95e-11!113;UBERON:0001981!5.83e-11!60;UBERON:0007500!5.83e-11!60;UBERON:0004537!5.83e-11!60;UBERON:0006965!5.83e-11!60;UBERON:0003104!6.51e-11!238;UBERON:0009142!6.51e-11!238;UBERON:0001637!1.20e-10!42;UBERON:0003509!1.20e-10!42;UBERON:0004572!1.20e-10!42;UBERON:0004535!1.55e-10!110;UBERON:0000055!2.26e-10!69;UBERON:0004573!2.75e-10!33;UBERON:0004571!2.75e-10!33;UBERON:0000926!6.02e-09!448;UBERON:0004120!6.02e-09!448;UBERON:0006603!6.02e-09!448;UBERON:0000475!1.21e-08!365;UBERON:0000481!1.67e-07!347;UBERON:0007100!6.95e-07!27 | |ontology_enrichment_uberon=UBERON:0005256!3.59e-19!143;UBERON:0002100!1.98e-17!216;UBERON:0000914!2.55e-17!83;UBERON:0002329!2.55e-17!83;UBERON:0003077!2.55e-17!83;UBERON:0003059!2.55e-17!83;UBERON:0007282!2.55e-17!83;UBERON:0009618!2.55e-17!83;UBERON:0007285!2.55e-17!83;UBERON:0001134!2.65e-16!61;UBERON:0002036!2.65e-16!61;UBERON:0003082!2.65e-16!61;UBERON:0002385!3.38e-16!63;UBERON:0001015!3.38e-16!63;UBERON:0000383!3.38e-16!63;UBERON:0004290!5.01e-16!70;UBERON:0004872!3.63e-15!84;UBERON:0003914!4.48e-15!118;UBERON:0000490!9.21e-15!138;UBERON:0000486!9.75e-15!82;UBERON:0002049!2.27e-13!79;UBERON:0007798!2.27e-13!79;UBERON:0001009!4.95e-11!113;UBERON:0001981!5.83e-11!60;UBERON:0007500!5.83e-11!60;UBERON:0004537!5.83e-11!60;UBERON:0006965!5.83e-11!60;UBERON:0003104!6.51e-11!238;UBERON:0009142!6.51e-11!238;UBERON:0001637!1.20e-10!42;UBERON:0003509!1.20e-10!42;UBERON:0004572!1.20e-10!42;UBERON:0004535!1.55e-10!110;UBERON:0000055!2.26e-10!69;UBERON:0004573!2.75e-10!33;UBERON:0004571!2.75e-10!33;UBERON:0000926!6.02e-09!448;UBERON:0004120!6.02e-09!448;UBERON:0006603!6.02e-09!448;UBERON:0000475!1.21e-08!365;UBERON:0000481!1.67e-07!347;UBERON:0007100!6.95e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.28e-07;8!UBERON:0000982;1.28e-07;8!UBERON:0004770;1.28e-07;8!UBERON:0004457;1.55e-07;9!UBERON:0000042;1.55e-07;9!UBERON:0002384;4.31e-07;198!UBERON:0000948;7.70e-07;22!UBERON:0011135;7.82e-07;5!UBERON:0002216;7.82e-07;5!UBERON:0011134;7.82e-07;5!UBERON:0002209;7.82e-07;5!UBERON:0002213;7.82e-07;5!UBERON:0007844;7.82e-07;5!UBERON:0011138;7.82e-07;5!UBERON:0001130;7.82e-07;5!UBERON:0001066;7.82e-07;5!UBERON:0001468;7.82e-07;5 | |||
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|phase1_expression=4.1786027232228,7.92171938396638,4.08767771878316,5.00366491765652,2.23480547213644,6.97870819280295,2.53299878168311,1.89515962028049,6.26845507679612,0.245733936501509,0.697801167972428,0.218441372130172,0,7.67351388352289,7.62213964174206,1.34465029290355,1.80808358407193,2.92124036154949,2.43966399395253,0.246242116153576,1.63200552995402,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0.671746422719773,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,1.15076305659177,3.97583067623023,7.01873074890245,12.6016471495917,0,1.45990461090791,0.283604451492204,1.10864698731282,1.05401742831751,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0,0,2.47606237746061,0.626984899610432,0,1.06729878806013,1.00416183829401,0.402829317109147,0.760272105718513,1.95249646038536,0.367663080345869,4.0507097394088,0.714397826272638,0.673588117878509,0.675668882899933,1.53316637465883,0,1.28241220751285,0,0,0.436094052142534,2.48485975847659,0.886413581652058,0.397227542439656,2.0078563452417,1.41867352879343,3.36406560085384,1.06748995729705,3.94668077467456,0.311211035399766,0.269421344139376,1.14423332179421,3.17850598054356,1.72852777344,0,0.312160076830321,1.71141546463335,0.896692083310806,0.23486899728753,0.161872944368132,0,4.08308342509786,0.61417158655884,4.95963749643674,5.94001428641027,9.39614331258516,0,0.718618141816238,0.505008341862199,0.875829639103749,0.554128230968366,2.63386572528503,11.0335606487647,5.85928429735728,0.680593098960126,1.79389635688862,1.70845911054854,2.11931901159562,2.10063767259082,2.78241828943785,0.257640540045629,2.97786970130544,0.843881661206331,1.46155507741798,0.757301322732344,2.57739716198438,4.68773564774555,0,1.30977727695932,2.03472710772585,0,0.272746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,4.5026865673502,1.38134921352481,4.17931135228781,3.60939740834793,0,0.168584690078102,0,0,0,0,0,0,0,0,0,1.6462960453256,1.47008711385542,5.07020139287323,3.9313088667105,5.31710916013264,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,2.88662684050547,0.115930404975077,0.821860859650752,0.433099343283221,2.31492756288305,0.190254152234598,0,1.71697232418975,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,1.71072446022705,0.102827492703324,0.600686115687835,0.285826432630578,1.90622843387113,0.43596006883328,2.27348686044945,0.387815147273333,0,1.690605505112,2.39344304926383,3.12022310734098,2.05765899409714,4.25547396069835,3.46348832720929,2.7165818795048,2.17048642156577,1.64648067356154,0.65147236858747,4.6200953336531,2.37585561880029,2.41151501647669,0.871533458600294,4.69873058555668,0,0.502257091432126,0,1.67737398844108,2.29723871668228,0,3.61953266668948,7.60262393436419,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,14.7229790062968,16.5056271949693,5.96783052139418,2.70362119990049,9.27830741745241,5.67728694122165,2.92853537481783,2.70851489754947,4.5481500811197,1.03473071292505,2.65690239414175,1.84369168541703,2.43274120510632,4.50342662164303,3.0882908142977,0,0,0,0.606255142892519,3.32870879020994,0.907170879989041,2.48107807818777,1.53461973288062,7.85848264412606,4.61300937320523,3.58195074346692,4.02134802859019,7.42090332224955,1.23367755042124,2.48586415438378,1.14978018419333,2.59627214591811,2.20799719073923,0,0,0.184161977871793,1.83703117063371,2.1850940160806,3.2781103739856,0,0.308061348417659,0,1.46139224653261,0.211103257785751,1.13733384070897,0.680374821106063,0.647747748306418,4.62681758070868,1.62567862526312,2.50844886927427,0.254876273045038,0,0,0,0,0,0,0,1.33953315142039,0.0915694648183434,0,0,0.650060246036521,3.21367859688319,1.25671933779759,2.46477787383431,1.38153307253517,0.275673144969061,2.14840489736547,3.62541734785571,1.44885266607372,0.890320356467374,0.330569830721956,0,0.255225424989168,0.2023155617111,6.04299214086472,5.03699754929024,2.0911118104818,0.616067160352178,2.66153015158511,0.869932992075073,1.66791797193528,0.715624433709956,2.232950216158,4.42931194606216,1.71567174531442,1.27948895655667,2.56763392820352,4.13664222303718,0.78494864019923,0.539617372749944,1.92175920815238,1.17812402345686,1.81964233415984,1.58510321173008,2.52755073743389,1.95053495635836,0.974853958525138,4.22600587027022,1.50149902548784,2.68670320712054,1.13008116620243,5.51365343546124,2.65375590096488,2.63070531152258,2.31510213706675,2.62357900818653,0.202910376962704,0.92947049429925,0.563391205064483,0,0.88424136911809,1.07001315444375,2.83808851256478,14.3553192002412,13.501090611356,0.379473173765715,1.39973888097993,0.0962221127255121,0,0,1.03558180854457,0,0,0.443430153536676,0.689170200620878,0,0,0,0,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| ||
|short_description=p@chr17:38613501..38613547,+ | |short_description=p@chr17:38613501..38613547,+ | ||
}} | }} |
Latest revision as of 16:29, 25 July 2015
Short description: | p@chr17:38613501..38613547, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38613501..38613547, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.61e-17 | 58 |
myoblast | 3.61e-17 | 58 |
multi-potent skeletal muscle stem cell | 3.61e-17 | 58 |
muscle cell | 2.24e-15 | 55 |
fibroblast | 5.04e-14 | 76 |
multi fate stem cell | 7.22e-13 | 427 |
electrically responsive cell | 1.27e-12 | 61 |
electrically active cell | 1.27e-12 | 61 |
smooth muscle cell | 1.31e-12 | 43 |
smooth muscle myoblast | 1.31e-12 | 43 |
somatic stem cell | 4.00e-12 | 433 |
stem cell | 3.53e-11 | 441 |
mesodermal cell | 1.12e-10 | 121 |
preadipocyte | 1.76e-09 | 12 |
vascular associated smooth muscle cell | 3.03e-08 | 32 |
stromal cell | 1.26e-07 | 28 |
cardiocyte | 3.94e-07 | 16 |
fat cell | 8.63e-07 | 15 |