FFCP PHASE1:Hg19::chr1:207096678..207096699,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:207096678..207096699,+
|short_description=p@chr1:207096678..207096699,+
|description=CAGE_peak_at_chr1:207096678..207096699,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:207096678..207096699,+ | |||
|coexpression_cluster_id=C2067 | |||
|description=CAGE_peak_at_chr1:207096678..207096699,+ | |||
|id=chr1:207096678..207096699,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.60e-45!53;CL:0000051!2.60e-45!53;CL:0000838!4.11e-44!52;CL:0000738!1.65e-41!140;CL:0002087!8.01e-40!119;CL:0000037!4.63e-36!172;CL:0000566!4.63e-36!172;CL:0000988!1.42e-32!182;CL:0002031!1.03e-31!124;CL:0002032!1.47e-30!165;CL:0000837!1.47e-30!165;CL:0000945!1.22e-23!24;CL:0000826!1.22e-23!24;CL:0000791!5.97e-23!18;CL:0000789!5.97e-23!18;CL:0002420!5.97e-23!18;CL:0002419!5.97e-23!18;CL:0000790!5.97e-23!18;CL:0000084!1.77e-18!25;CL:0000827!1.77e-18!25;CL:0000236!3.52e-17!14;CL:0000625!1.77e-14!11;CL:0000624!3.97e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.64e-39;53!CL:0000791;1.20e-34;18!CL:0000789;1.20e-34;18!CL:0002419;1.20e-34;18!CL:0000945;1.90e-33;24!CL:0000084;5.74e-29;25!CL:0000236;5.09e-24;13!CL:0000625;1.20e-21;11!CL:0000624;3.59e-13;6!CL:0002087;5.04e-11;104!CL:0000898;4.58e-08;3!CL:0000226;8.50e-07;3!CL:0000842;8.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.01e-68,53;CL:0000051,2.01e-68,53;CL:0000838,1.45e-66,52;CL:0000791,1.21e-34,18;CL:0000789,1.21e-34,18;CL:0002420,1.21e-34,18;CL:0002419,1.21e-34,18;CL:0000790,1.21e-34,18;CL:0002087,2.74e-34,115;CL:0000738,9.17e-34,136;CL:0000945,2.07e-33,24;CL:0000826,2.07e-33,24;CL:0000084,6.89e-29,25;CL:0000827,6.89e-29,25;CL:0002031,2.73e-26,120;CL:0000236,5.39e-26,14;CL:0000037,1.45e-25,168;CL:0000988,1.76e-23,177;CL:0000625,1.64e-21,11;CL:0002032,1.79e-21,161;CL:0000837,1.79e-21,161;CL:0000624,3.03e-13,6;CL:0000898,4.38e-08,3;CL:0000226,8.69e-07,3;CL:0000842,8.69e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;2.64e-39;53!CL:0000790;1.20e-34;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.48e-11!15;UBERON:0000179!5.48e-11!15;UBERON:0000463!5.48e-11!15;UBERON:0002390!1.38e-10!102;UBERON:0003061!1.38e-10!102;UBERON:0002193!4.85e-10!112;UBERON:0004177!2.82e-07!7;UBERON:0007023!9.52e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.39e-17;15!UBERON:0000179;6.39e-17;15!UBERON:0000463;6.39e-17;15!UBERON:0002390;2.13e-11;32!UBERON:0002193;7.47e-08;42!UBERON:0004177;3.43e-07;5!UBERON:0005057;3.43e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.53e-17,15;UBERON:0000179,8.53e-17,15;UBERON:0000463,8.53e-17,15;UBERON:0004177,1.19e-10,7;UBERON:0005057,1.19e-10,7;UBERON:0002370,3.28e-09,4;UBERON:0005058,3.28e-09,4;UBERON:0009113,3.28e-09,4;UBERON:0003295,3.28e-09,4;UBERON:0005562,3.28e-09,4 | |||
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| ||
|short_description=p@chr1:207096678..207096699,+ | |||
}} | }} |
Latest revision as of 03:01, 28 July 2015
Short description: | p@chr1:207096678..207096699, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207096678..207096699, + |
Coexpression cluster: | C2067_CD4_CD19_CD8_B_thymus_plasma_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.01e-68 | 53 |
common lymphoid progenitor | 2.01e-68 | 53 |
lymphoid lineage restricted progenitor cell | 1.45e-66 | 52 |
mature alpha-beta T cell | 1.21e-34 | 18 |
alpha-beta T cell | 1.21e-34 | 18 |
immature T cell | 1.21e-34 | 18 |
mature T cell | 1.21e-34 | 18 |
immature alpha-beta T cell | 1.21e-34 | 18 |
nongranular leukocyte | 2.74e-34 | 115 |
leukocyte | 9.17e-34 | 136 |
lymphocyte of B lineage | 2.07e-33 | 24 |
pro-B cell | 2.07e-33 | 24 |
T cell | 6.89e-29 | 25 |
pro-T cell | 6.89e-29 | 25 |
hematopoietic lineage restricted progenitor cell | 2.73e-26 | 120 |
B cell | 5.39e-26 | 14 |
hematopoietic stem cell | 1.45e-25 | 168 |
hematopoietic cell | 1.76e-23 | 177 |
CD8-positive, alpha-beta T cell | 1.64e-21 | 11 |
hematopoietic oligopotent progenitor cell | 1.79e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-21 | 161 |
CD4-positive, alpha-beta T cell | 3.03e-13 | 6 |
naive T cell | 4.38e-08 | 3 |
single nucleate cell | 8.69e-07 | 3 |
mononuclear cell | 8.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 8.53e-17 | 15 |
haemolymphatic fluid | 8.53e-17 | 15 |
organism substance | 8.53e-17 | 15 |
hemopoietic organ | 1.19e-10 | 7 |
immune organ | 1.19e-10 | 7 |
thymus | 3.28e-09 | 4 |
hemolymphoid system gland | 3.28e-09 | 4 |
thymic region | 3.28e-09 | 4 |
pharyngeal gland | 3.28e-09 | 4 |
thymus primordium | 3.28e-09 | 4 |