FFCP PHASE1:Hg19::chr1:209704573..209704587,+: Difference between revisions
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|id=chr1:209704573..209704587,+
|short_description=p@chr1:209704573..209704587,+
|description=CAGE_peak_at_chr1:209704573..209704587,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:209704573..209704587,+ | |||
|coexpression_cluster_id=C323 | |||
|description=CAGE_peak_at_chr1:209704573..209704587,+ | |||
|id=chr1:209704573..209704587,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.14e-26!3;CL:0002577!1.14e-26!3;CL:0002536!1.89e-18!2;CL:0002327!3.04e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.16e-117;3!CL:0002536;2.34e-79;2!CL:0000349;3.17e-52;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.16e-117,3;CL:0002536,2.34e-79,2;CL:0000349,3.17e-52,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!1.04e-17!2;DOID:178!1.76e-09!1;DOID:326!1.76e-09!1;DOID:3978!1.76e-09!1;DOID:3394!1.76e-09!1;DOID:5844!1.76e-09!1;DOID:1287!2.57e-09!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.34e-21!14;UBERON:0000158!1.34e-21!14;UBERON:0001987!3.63e-20!4;UBERON:0004340!3.63e-20!4;UBERON:0003124!1.09e-19!7;UBERON:0000007!7.43e-18!2;UBERON:0000478!2.05e-12!24;UBERON:0002084!6.31e-10!1;UBERON:0002082!6.31e-10!1;UBERON:0004706!6.31e-10!1;UBERON:0005418!6.88e-10!1;UBERON:0001389!6.88e-10!1;UBERON:0000026!6.88e-10!1;UBERON:0008784!6.88e-10!1;UBERON:0006058!6.88e-10!1;UBERON:0003663!6.88e-10!1;UBERON:0001383!6.88e-10!1;UBERON:0004256!6.88e-10!1;UBERON:0002529!6.88e-10!1;UBERON:0004708!6.88e-10!1;UBERON:0002101!6.88e-10!1;UBERON:0004709!6.88e-10!1;UBERON:0003661!6.88e-10!1;UBERON:0002471!6.88e-10!1;UBERON:0004357!6.88e-10!1;UBERON:0009872!6.88e-10!1;UBERON:0004347!6.88e-10!1;UBERON:0005420!6.88e-10!1;UBERON:0005732!6.88e-10!1;UBERON:0006057!6.88e-10!1;UBERON:0000978!6.88e-10!1;UBERON:0002103!6.88e-10!1;UBERON:0001665!6.88e-10!1;UBERON:0003823!6.88e-10!1;UBERON:0000154!6.88e-10!1;UBERON:0005733!6.88e-10!1;UBERON:0005730!6.88e-10!1;UBERON:0003296!2.17e-09!4;UBERON:0010133!2.17e-09!4;UBERON:0001911!3.04e-09!4;UBERON:0005333!3.04e-09!4;UBERON:0008425!3.04e-09!4;UBERON:0005311!3.04e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.41e-88;4!UBERON:0000478;1.51e-41;24!UBERON:0000305;1.28e-23;7!UBERON:0005631;6.93e-17;10!UBERON:0000158;6.93e-17;10!UBERON:0000077;5.42e-14;27!UBERON:0000474;1.86e-08;37!UBERON:0003100;2.77e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.41e-88,4;UBERON:0004340,1.41e-88,4;UBERON:0005631,1.65e-70,14;UBERON:0000158,1.65e-70,14;UBERON:0003124,3.85e-51,7;UBERON:0000478,1.51e-41,24;UBERON:0000305,1.28e-23,7;UBERON:0004871,8.12e-21,8;UBERON:0000995,9.85e-18,21;UBERON:0005795,5.72e-17,22;UBERON:0003975,5.72e-17,22;UBERON:0004923,1.27e-15,66;UBERON:0004175,4.84e-15,25;UBERON:0000077,4.36e-13,29;UBERON:0003134,1.95e-10,37;UBERON:0000474,1.95e-10,37;UBERON:0003100,1.70e-09,41;UBERON:0006554,2.21e-08,47;UBERON:0003133,3.19e-08,48;UBERON:0001008,3.19e-08,48;UBERON:0005156,8.00e-07,59;UBERON:0000990,8.00e-07,59 | |||
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|short_description=p@chr1:209704573..209704587,+ | |||
}} | }} |
Latest revision as of 03:18, 28 July 2015
Short description: | p@chr1:209704573..209704587, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209704573..209704587, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.16e-117 | 3 |
amniotic epithelial cell | 2.34e-79 | 2 |
extraembryonic cell | 3.17e-52 | 19 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.41e-88 | 4 |
allantois | 1.41e-88 | 4 |
extraembryonic membrane | 1.65e-70 | 14 |
membranous layer | 1.65e-70 | 14 |
chorion | 3.85e-51 | 7 |
extraembryonic structure | 1.51e-41 | 24 |
amnion | 1.28e-23 | 7 |
somatic layer of lateral plate mesoderm | 8.12e-21 | 8 |
uterus | 9.85e-18 | 21 |
embryonic uterus | 5.72e-17 | 22 |
internal female genitalia | 5.72e-17 | 22 |
organ component layer | 1.27e-15 | 66 |
internal genitalia | 4.84e-15 | 25 |
mixed endoderm/mesoderm-derived structure | 4.36e-13 | 29 |
female reproductive organ | 1.95e-10 | 37 |
female reproductive system | 1.95e-10 | 37 |
female organism | 1.70e-09 | 41 |
urinary system structure | 2.21e-08 | 47 |
reproductive organ | 3.19e-08 | 48 |
renal system | 3.19e-08 | 48 |
reproductive structure | 8.00e-07 | 59 |
reproductive system | 8.00e-07 | 59 |