FFCP PHASE1:Hg19::chr1:22109560..22109606,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:22109560..22109606,-
|short_description=p2@USP48
|description=CAGE_peak_2_at_USP48_5end
|association_with_transcript=-76bp_to_ENST00000529637_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84196 | |EntrezGene=84196 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18533 | |HGNC=18533 | ||
|TSSclassifier=strong | |||
|UniProt=B7ZKS7 | |UniProt=B7ZKS7 | ||
|association_with_transcript=-76bp_to_ENST00000529637_5end | |||
|cluster_id=chr1:22109560..22109606,- | |||
|description=CAGE_peak_2_at_USP48_5end | |||
|id=chr1:22109560..22109606,- | |||
|ontology_enrichment_celltype=CL:0000542!1.84e-14!53;CL:0000051!1.84e-14!53;CL:0000838!4.05e-14!52;CL:0000945!2.52e-10!24;CL:0000826!2.52e-10!24;CL:0000037!8.23e-08!172;CL:0000566!8.23e-08!172;CL:0002032!3.29e-07!165;CL:0000837!3.29e-07!165;CL:0000066!5.66e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.33e-10;24!CL:0000542;1.85e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.83e-14,53;CL:0000051,1.83e-14,53;CL:0000838,4.05e-14,52;CL:0000945,2.51e-10,24;CL:0000826,2.51e-10,24;CL:0000037,1.33e-07,168;CL:0000066,3.23e-07,253;CL:0002032,5.26e-07,161;CL:0000837,5.26e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;1.85e-08;53 | |||
|ontology_enrichment_disease=DOID:162!4.13e-21!235;DOID:14566!2.16e-19!239;DOID:305!1.88e-16!106;DOID:0050687!1.24e-13!143;DOID:0050686!9.26e-13!137;DOID:2531!1.50e-10!51;DOID:0060083!1.50e-10!51;DOID:8692!1.39e-08!31;DOID:1240!2.08e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.31e-08;31!DOID:2531;7.36e-07;51!DOID:0060083;7.36e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.11e-21,235;DOID:14566,2.15e-19,239;DOID:305,1.87e-16,106;DOID:0050687,1.24e-13,143;DOID:0050686,9.24e-13,137;DOID:2531,1.50e-10,51;DOID:0060083,1.50e-10,51;DOID:8692,1.39e-08,31;DOID:1240,2.08e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@USP48 | |||
}} | }} |
Latest revision as of 07:12, 25 September 2015
Short description: | p2@USP48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP48_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000529637_5end |
EntrezGene: | USP48 |
HGNC: | 18533 |
UniProt: | B7ZKS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.83e-14 | 53 |
common lymphoid progenitor | 1.83e-14 | 53 |
lymphoid lineage restricted progenitor cell | 4.05e-14 | 52 |
lymphocyte of B lineage | 2.51e-10 | 24 |
pro-B cell | 2.51e-10 | 24 |
hematopoietic stem cell | 1.33e-07 | 168 |
epithelial cell | 3.23e-07 | 253 |
hematopoietic oligopotent progenitor cell | 5.26e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.26e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.11e-21 | 235 |
disease of cellular proliferation | 2.15e-19 | 239 |
carcinoma | 1.87e-16 | 106 |
cell type cancer | 1.24e-13 | 143 |
organ system cancer | 9.24e-13 | 137 |
hematologic cancer | 1.50e-10 | 51 |
immune system cancer | 1.50e-10 | 51 |
myeloid leukemia | 1.39e-08 | 31 |
leukemia | 2.08e-08 | 39 |