FFCP PHASE1:Hg19::chr1:2360057..2360066,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:2360057..2360066,+ | |||
|coexpression_cluster_id=C564 | |coexpression_cluster_id=C564 | ||
|description=CAGE_peak_at_chr1:2360057..2360066,+ | |description=CAGE_peak_at_chr1:2360057..2360066,+ | ||
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|ontology_enrichment_celltype=CL:0002076!1.95e-36!43;CL:0000223!1.88e-27!59;CL:0002368!3.78e-27!13;CL:0002159!9.04e-22!13;CL:0000066!7.75e-21!254;CL:0000622!5.31e-19!5;CL:0000244!6.14e-16!4;CL:0000731!6.14e-16!4;CL:0000154!8.77e-16!6;CL:0002251!1.71e-15!21;CL:0002202!2.03e-14!9;CL:0002632!2.03e-14!9;CL:0002623!2.66e-12!3;CL:0002328!5.40e-12!3;CL:0002621!6.27e-12!3;CL:0000068!1.05e-11!3;CL:0000069!1.05e-11!3;CL:0000307!1.05e-11!3;CL:0000377!1.05e-11!3;CL:0000362!1.37e-11!8;CL:0002077!1.73e-11!33;CL:0000220!9.75e-11!246;CL:0002321!1.39e-10!248;CL:0000150!2.08e-10!9;CL:0000240!4.35e-10!6;CL:0000311!4.35e-10!6;CL:0000079!4.35e-10!6;CL:0000237!4.35e-10!6;CL:0000036!4.35e-10!6;CL:0000357!4.35e-10!6;CL:0000114!4.35e-10!6;CL:0002327!3.50e-09!4;CL:0000317!2.01e-08!2;CL:1000448!2.01e-08!2;CL:0002308!2.01e-08!2;CL:0002140!2.01e-08!2;CL:0000575!4.19e-08!2;CL:0000312!2.26e-07!5 | |ontology_enrichment_celltype=CL:0002076!1.95e-36!43;CL:0000223!1.88e-27!59;CL:0002368!3.78e-27!13;CL:0002159!9.04e-22!13;CL:0000066!7.75e-21!254;CL:0000622!5.31e-19!5;CL:0000244!6.14e-16!4;CL:0000731!6.14e-16!4;CL:0000154!8.77e-16!6;CL:0002251!1.71e-15!21;CL:0002202!2.03e-14!9;CL:0002632!2.03e-14!9;CL:0002623!2.66e-12!3;CL:0002328!5.40e-12!3;CL:0002621!6.27e-12!3;CL:0000068!1.05e-11!3;CL:0000069!1.05e-11!3;CL:0000307!1.05e-11!3;CL:0000377!1.05e-11!3;CL:0000362!1.37e-11!8;CL:0002077!1.73e-11!33;CL:0000220!9.75e-11!246;CL:0002321!1.39e-10!248;CL:0000150!2.08e-10!9;CL:0000240!4.35e-10!6;CL:0000311!4.35e-10!6;CL:0000079!4.35e-10!6;CL:0000237!4.35e-10!6;CL:0000036!4.35e-10!6;CL:0000357!4.35e-10!6;CL:0000114!4.35e-10!6;CL:0002327!3.50e-09!4;CL:0000317!2.01e-08!2;CL:1000448!2.01e-08!2;CL:0002308!2.01e-08!2;CL:0002140!2.01e-08!2;CL:0000575!4.19e-08!2;CL:0000312!2.26e-07!5 | ||
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|ontology_enrichment_development_v019=CL:0000223;8.85e-14;58!CL:0000377;3.97e-09;3 | |ontology_enrichment_development_v019=CL:0000223;8.85e-14;58!CL:0000377;3.97e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.72e-15!72;UBERON:0004119!3.98e-13!169;UBERON:0000925!3.98e-13!169;UBERON:0006595!3.98e-13!169;UBERON:0000365!9.29e-13!5;UBERON:0007196!5.31e-12!14;UBERON:0001558!5.31e-12!14;UBERON:0004815!5.40e-12!3;UBERON:0002031!5.40e-12!3;UBERON:0001949!6.27e-12!3;UBERON:0005910!1.24e-10!6;UBERON:0000161!1.57e-10!35;UBERON:0000166!4.99e-10!21;UBERON:0003102!2.53e-09!95;UBERON:0001911!3.50e-09!4;UBERON:0005333!3.50e-09!4;UBERON:0008425!3.50e-09!4;UBERON:0005311!3.50e-09!4;UBERON:0002185!4.24e-09!4;UBERON:0000165!5.07e-09!28;UBERON:0000930!5.07e-09!28;UBERON:0000065!8.75e-09!53;UBERON:0003126!1.81e-08!7;UBERON:0001005!1.81e-08!7;UBERON:0002419!2.01e-08!2;UBERON:0007771!2.01e-08!2;UBERON:0003297!2.01e-08!2;UBERON:0001821!2.01e-08!2;UBERON:0003487!2.01e-08!2;UBERON:0001820!2.01e-08!2;UBERON:0005089!2.01e-08!2;UBERON:0005088!2.01e-08!2;UBERON:0001444!5.89e-07!48 | |ontology_enrichment_uberon=UBERON:0001004!1.72e-15!72;UBERON:0004119!3.98e-13!169;UBERON:0000925!3.98e-13!169;UBERON:0006595!3.98e-13!169;UBERON:0000365!9.29e-13!5;UBERON:0007196!5.31e-12!14;UBERON:0001558!5.31e-12!14;UBERON:0004815!5.40e-12!3;UBERON:0002031!5.40e-12!3;UBERON:0001949!6.27e-12!3;UBERON:0005910!1.24e-10!6;UBERON:0000161!1.57e-10!35;UBERON:0000166!4.99e-10!21;UBERON:0003102!2.53e-09!95;UBERON:0001911!3.50e-09!4;UBERON:0005333!3.50e-09!4;UBERON:0008425!3.50e-09!4;UBERON:0005311!3.50e-09!4;UBERON:0002185!4.24e-09!4;UBERON:0000165!5.07e-09!28;UBERON:0000930!5.07e-09!28;UBERON:0000065!8.75e-09!53;UBERON:0003126!1.81e-08!7;UBERON:0001005!1.81e-08!7;UBERON:0002419!2.01e-08!2;UBERON:0007771!2.01e-08!2;UBERON:0003297!2.01e-08!2;UBERON:0001821!2.01e-08!2;UBERON:0003487!2.01e-08!2;UBERON:0001820!2.01e-08!2;UBERON:0005089!2.01e-08!2;UBERON:0005088!2.01e-08!2;UBERON:0001444!5.89e-07!48 | ||
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| ||
|short_description=p@chr1:2360057..2360066,+ | |short_description=p@chr1:2360057..2360066,+ | ||
}} | }} |
Latest revision as of 05:22, 28 July 2015
Short description: | p@chr1:2360057..2360066, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:2360057..2360066, + |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 8.33e-34 | 42 |
respiratory epithelial cell | 7.34e-29 | 13 |
transitional epithelial cell | 4.02e-25 | 4 |
urothelial cell | 4.02e-25 | 4 |
endodermal cell | 1.44e-23 | 58 |
epithelial cell | 8.96e-21 | 253 |
acinar cell | 4.20e-20 | 5 |
acinar cell of salivary gland | 3.75e-19 | 3 |
gingival epithelial cell | 1.53e-18 | 3 |
protein secreting cell | 8.71e-17 | 6 |
general ecto-epithelial cell | 2.63e-15 | 14 |
mammary gland epithelial cell | 2.87e-14 | 4 |
glandular epithelial cell | 3.05e-11 | 9 |
epithelial cell of tracheobronchial tree | 4.79e-11 | 9 |
epithelial cell of lower respiratory tract | 4.79e-11 | 9 |
epithelial cell of alimentary canal | 2.01e-10 | 20 |
ecto-epithelial cell | 2.09e-10 | 34 |
embryonic cell | 3.75e-10 | 250 |
epithelial cell of prostate | 2.24e-09 | 3 |
epithelial cell of Malassez | 2.87e-09 | 3 |
bronchial epithelial cell | 3.38e-09 | 3 |
duct epithelial cell | 5.51e-09 | 3 |
branched duct epithelial cell | 5.51e-09 | 3 |
tracheal epithelial cell | 5.51e-09 | 3 |
tracheoblast | 5.51e-09 | 3 |
epidermal cell | 9.01e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.81e-20 | 5 |
gingival epithelium | 1.53e-18 | 3 |
transitional epithelium | 8.03e-17 | 6 |
mammary gland | 2.87e-14 | 4 |
mammary bud | 2.87e-14 | 4 |
mammary ridge | 2.87e-14 | 4 |
mammary placode | 2.87e-14 | 4 |
respiratory system | 3.04e-13 | 74 |
endoderm-derived structure | 4.94e-11 | 160 |
endoderm | 4.94e-11 | 160 |
presumptive endoderm | 4.94e-11 | 160 |
saliva-secreting gland | 7.73e-10 | 6 |
gland of oral region | 7.73e-10 | 6 |
gland of foregut | 7.73e-10 | 6 |
oral gland | 7.73e-10 | 6 |
oral cavity | 7.73e-10 | 6 |
orifice | 1.00e-09 | 36 |
oral opening | 1.99e-09 | 22 |
surface structure | 2.79e-09 | 99 |
lower respiratory tract epithelium | 3.38e-09 | 3 |
epithelium of bronchus | 3.38e-09 | 3 |
exocrine gland | 7.31e-09 | 31 |
exocrine system | 7.31e-09 | 31 |
external ectoderm | 2.25e-07 | 8 |
head | 2.61e-07 | 56 |
epithelial bud | 2.63e-07 | 37 |
epithelium of mucosa | 2.87e-07 | 8 |
gingiva | 2.87e-07 | 8 |
jaw skeleton | 3.74e-07 | 4 |
splanchnocranium | 3.74e-07 | 4 |
epithelial fold | 3.77e-07 | 47 |
endo-epithelium | 4.91e-07 | 82 |
mouth | 5.12e-07 | 29 |
stomodeum | 5.12e-07 | 29 |
gland | 5.24e-07 | 59 |