FFCP PHASE1:Hg19::chrX:48432444..48432466,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5935 | |EntrezGene=5935 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9900 | |HGNC=9900 | ||
|TSSclassifier=strong | |||
|UniProt=P98179 | |UniProt=P98179 | ||
|association_with_transcript=-274bp_to_NM_006743_5end | |association_with_transcript=-274bp_to_NM_006743_5end | ||
|cluster_id=chrX:48432444..48432466,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_10_at_RBM3_5end | |description=CAGE_peak_10_at_RBM3_5end | ||
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|ontology_enrichment_celltype=CL:0002057!4.00e-26!42;CL:0000860!2.03e-25!45;CL:0000766!1.90e-22!76;CL:0000557!9.45e-22!71;CL:0000839!1.31e-20!70;CL:0002009!1.21e-19!65;CL:0002194!5.73e-19!63;CL:0000576!5.73e-19!63;CL:0000040!5.73e-19!63;CL:0000559!5.73e-19!63;CL:0000738!2.10e-17!140;CL:0002031!2.82e-16!124;CL:0002087!6.21e-15!119;CL:0000763!2.05e-13!112;CL:0000049!2.05e-13!112;CL:0000988!9.15e-13!182;CL:0000037!3.47e-12!172;CL:0000566!3.47e-12!172;CL:0002032!6.75e-12!165;CL:0000837!6.75e-12!165 | |ontology_enrichment_celltype=CL:0002057!4.00e-26!42;CL:0000860!2.03e-25!45;CL:0000766!1.90e-22!76;CL:0000557!9.45e-22!71;CL:0000839!1.31e-20!70;CL:0002009!1.21e-19!65;CL:0002194!5.73e-19!63;CL:0000576!5.73e-19!63;CL:0000040!5.73e-19!63;CL:0000559!5.73e-19!63;CL:0000738!2.10e-17!140;CL:0002031!2.82e-16!124;CL:0002087!6.21e-15!119;CL:0000763!2.05e-13!112;CL:0000049!2.05e-13!112;CL:0000988!9.15e-13!182;CL:0000037!3.47e-12!172;CL:0000566!3.47e-12!172;CL:0002032!6.75e-12!165;CL:0000837!6.75e-12!165 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.74e-22;5!CL:0000860;3.95e-20;33!CL:0002057;3.95e-20;33!CL:0000473;1.75e-14;39!CL:0000234;1.75e-14;39!CL:0000766;4.78e-14;69!CL:0000163;1.57e-12;9!CL:0000576;1.96e-09;48!CL:0001014;3.92e-07;2!CL:0001016;3.92e-07;2 | |ontology_enrichment_celltype_v019=CL:0000097;4.74e-22;5!CL:0000860;3.95e-20;33!CL:0002057;3.95e-20;33!CL:0000473;1.75e-14;39!CL:0000234;1.75e-14;39!CL:0000766;4.78e-14;69!CL:0000163;1.57e-12;9!CL:0000576;1.96e-09;48!CL:0001014;3.92e-07;2!CL:0001016;3.92e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.67e-23,67;CL:0000097,3.84e-22,5;CL:0002028,3.84e-22,5;CL:0000839,1.08e-19,66;CL:0000766,5.82e-18,72;CL:0000860,7.34e-17,42;CL:0002057,7.34e-17,42;CL:0000473,1.18e-14,48;CL:0000234,1.18e-14,48;CL:0002009,4.06e-14,61;CL:0000763,7.28e-14,108;CL:0000049,7.28e-14,108;CL:0000163,1.40e-12,9;CL:0002031,2.49e-12,120;CL:0002194,1.48e-11,59;CL:0000576,1.48e-11,59;CL:0000040,1.48e-11,59;CL:0000559,1.48e-11,59;CL:0000738,1.07e-10,136;CL:0002032,8.63e-09,161;CL:0000837,8.63e-09,161;CL:0000037,2.35e-08,168;CL:0000988,7.56e-08,177;CL:0001014,3.93e-07,2;CL:0001016,3.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.09e-14;42 | |ontology_enrichment_development_v019=CL:0002057;3.09e-14;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.65e-21!102;UBERON:0003061!5.65e-21!102;UBERON:0002371!2.85e-19!80;UBERON:0002193!6.59e-19!112;UBERON:0001474!3.52e-18!86;UBERON:0002405!3.54e-14!115;UBERON:0004765!8.22e-14!101;UBERON:0001434!8.22e-14!101;UBERON:0003081!9.06e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!5.65e-21!102;UBERON:0003061!5.65e-21!102;UBERON:0002371!2.85e-19!80;UBERON:0002193!6.59e-19!112;UBERON:0001474!3.52e-18!86;UBERON:0002405!3.54e-14!115;UBERON:0004765!8.22e-14!101;UBERON:0001434!8.22e-14!101;UBERON:0003081!9.06e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;7.92e-13;4!UBERON:0010133;7.92e-13;4!UBERON:0001894;1.04e-07;7!UBERON:0001905;2.35e-07;2!UBERON:0002757;2.35e-07;2!UBERON:0010134;2.35e-07;2!UBERON:0005408;2.35e-07;2!UBERON:0001899;2.35e-07;2!UBERON:0000007;3.92e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003296;7.92e-13;4!UBERON:0010133;7.92e-13;4!UBERON:0001894;1.04e-07;7!UBERON:0001905;2.35e-07;2!UBERON:0002757;2.35e-07;2!UBERON:0010134;2.35e-07;2!UBERON:0005408;2.35e-07;2!UBERON:0001899;2.35e-07;2!UBERON:0000007;3.92e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.81e-20,76;UBERON:0001474,1.06e-18,82;UBERON:0004765,6.40e-17,90;UBERON:0002405,2.49e-16,93;UBERON:0002390,2.00e-15,98;UBERON:0003061,2.00e-15,98;UBERON:0001434,4.34e-15,100;UBERON:0002193,7.28e-14,108;UBERON:0003296,6.07e-13,4;UBERON:0010133,6.07e-13,4;UBERON:0002204,2.04e-08,167;UBERON:0001894,8.94e-08,7;UBERON:0006222,8.94e-08,7;UBERON:0001905,2.43e-07,2;UBERON:0002757,2.43e-07,2;UBERON:0010134,2.43e-07,2;UBERON:0005408,2.43e-07,2;UBERON:0001899,2.43e-07,2;UBERON:0000007,2.91e-07,2 | |||
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| ||
|short_description=p10@RBM3 | |short_description=p10@RBM3 | ||
}} | }} |
Latest revision as of 19:15, 15 September 2015
Short description: | p10@RBM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RBM3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -274bp_to_NM_006743_5end |
EntrezGene: | RBM3 |
HGNC: | 9900 |
UniProt: | P98179 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.67e-23 | 67 |
mast cell | 3.84e-22 | 5 |
basophil mast progenitor cell | 3.84e-22 | 5 |
myeloid lineage restricted progenitor cell | 1.08e-19 | 66 |
myeloid leukocyte | 5.82e-18 | 72 |
classical monocyte | 7.34e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.34e-17 | 42 |
defensive cell | 1.18e-14 | 48 |
phagocyte | 1.18e-14 | 48 |
macrophage dendritic cell progenitor | 4.06e-14 | 61 |
myeloid cell | 7.28e-14 | 108 |
common myeloid progenitor | 7.28e-14 | 108 |
endocrine cell | 1.40e-12 | 9 |
hematopoietic lineage restricted progenitor cell | 2.49e-12 | 120 |
monopoietic cell | 1.48e-11 | 59 |
monocyte | 1.48e-11 | 59 |
monoblast | 1.48e-11 | 59 |
promonocyte | 1.48e-11 | 59 |
leukocyte | 1.07e-10 | 136 |
hematopoietic oligopotent progenitor cell | 8.63e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.63e-09 | 161 |
hematopoietic stem cell | 2.35e-08 | 168 |
hematopoietic cell | 7.56e-08 | 177 |
CD1a-positive Langerhans cell | 3.93e-07 | 2 |
immature CD1a-positive Langerhans cell | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.81e-20 | 76 |
bone element | 1.06e-18 | 82 |
skeletal element | 6.40e-17 | 90 |
immune system | 2.49e-16 | 93 |
hematopoietic system | 2.00e-15 | 98 |
blood island | 2.00e-15 | 98 |
skeletal system | 4.34e-15 | 100 |
hemolymphoid system | 7.28e-14 | 108 |
gland of diencephalon | 6.07e-13 | 4 |
neuroendocrine gland | 6.07e-13 | 4 |
musculoskeletal system | 2.04e-08 | 167 |
diencephalon | 8.94e-08 | 7 |
future diencephalon | 8.94e-08 | 7 |
pineal body | 2.43e-07 | 2 |
regional part of epithalamus | 2.43e-07 | 2 |
secretory circumventricular organ | 2.43e-07 | 2 |
circumventricular organ | 2.43e-07 | 2 |
epithalamus | 2.43e-07 | 2 |
pituitary gland | 2.91e-07 | 2 |