FFCP PHASE1:Hg19::chr6:35109080..35109134,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6954 | |EntrezGene=6954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11658 | |HGNC=11658 | ||
|TSSclassifier=strong | |||
|UniProt=E7EP29,D6RBE4,B7Z7B5,Q8WWU5,D6R8Y5,D6RGY5,D6RAC0,D6R9D8,D6RGC0,D6R9R9,D6RFY8,D6R989 | |UniProt=E7EP29,D6RBE4,B7Z7B5,Q8WWU5,D6R8Y5,D6RGY5,D6RAC0,D6R9D8,D6RGC0,D6R9R9,D6RFY8,D6R989 | ||
|association_with_transcript=0bp_to_ENST00000373979,ENST00000394696,ENST00000412155,ENST00000427376,ENST00000444780,ENST00000445851,ENST00000455706,ENST00000469514,ENST00000486638,ENST00000492680,ENST00000503908,ENST00000505335,ENST00000505400,ENST00000507706,ENST00000509988,ENST00000510465,ENST00000514751_5end | |association_with_transcript=0bp_to_ENST00000373979,ENST00000394696,ENST00000412155,ENST00000427376,ENST00000444780,ENST00000445851,ENST00000455706,ENST00000469514,ENST00000486638,ENST00000492680,ENST00000503908,ENST00000505335,ENST00000505400,ENST00000507706,ENST00000509988,ENST00000510465,ENST00000514751_5end | ||
|cluster_id=chr6:35109080..35109134,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_TCP11_5end | |description=CAGE_peak_1_at_TCP11_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;5.56e-11;1!CL:0000557;5.56e-11;1!CL:0000037;1.10e-10;1!CL:0001024;1.10e-10;1 | |ontology_enrichment_celltype_v019=CL:0002032;5.56e-11;1!CL:0000557;5.56e-11;1!CL:0000037;1.10e-10;1!CL:0001024;1.10e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.33e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.80e-09;10!UBERON:0005564;1.80e-09;10 | |ontology_enrichment_development_v019=UBERON:0009117;1.80e-09;10!UBERON:0005564;1.80e-09;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!4.57e-07!6;UBERON:0003293!4.57e-07!6;UBERON:0003294!4.57e-07!6;UBERON:0010047!4.57e-07!6;UBERON:0000167!4.57e-07!6 | |ontology_enrichment_uberon=UBERON:0001044!4.57e-07!6;UBERON:0003293!4.57e-07!6;UBERON:0003294!4.57e-07!6;UBERON:0010047!4.57e-07!6;UBERON:0000167!4.57e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.39e-14;11!UBERON:0000473;1.04e-11;8!UBERON:0001301;3.58e-11;1!UBERON:0005795;1.10e-10;1!UBERON:0003101;2.27e-07;22!UBERON:0000079;2.27e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0003135;1.39e-14;11!UBERON:0000473;1.04e-11;8!UBERON:0001301;3.58e-11;1!UBERON:0005795;1.10e-10;1!UBERON:0003101;2.27e-07;22!UBERON:0000079;2.27e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.39e-14,11;UBERON:0000473,1.05e-11,8;UBERON:0001301,3.41e-11,1;UBERON:0003101,2.27e-07,22;UBERON:0000079,2.27e-07,22 | |||
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| ||
|short_description=p1@TCP11 | |short_description=p1@TCP11 | ||
}} | }} |
Latest revision as of 10:14, 18 September 2015
Short description: | p1@TCP11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TCP11_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000373979, ENST00000394696, ENST00000412155, ENST00000427376, ENST00000444780, ENST00000445851, ENST00000455706, ENST00000469514, ENST00000486638, ENST00000492680, ENST00000503908, ENST00000505335, ENST00000505400, ENST00000507706, ENST00000509988, ENST00000510465, ENST00000514751_5end |
EntrezGene: | TCP11 |
HGNC: | 11658 |
UniProt: | E7EP29D6RBE4B7Z7B5Q8WWU5D6R8Y5D6RGY5D6RAC0D6R9D8D6RGC0D6R9R9D6RFY8D6R989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.39e-14 | 11 |
testis | 1.05e-11 | 8 |
epididymis | 3.41e-11 | 1 |
male organism | 2.27e-07 | 22 |
male reproductive system | 2.27e-07 | 22 |