FFCP PHASE1:Hg19::chr10:17277201..17277219,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-369bp_to_ENST00000456355_5end | |association_with_transcript=-369bp_to_ENST00000456355_5end | ||
|cluster_id=chr10:17277201..17277219,- | |||
|coexpression_cluster_id=C490 | |coexpression_cluster_id=C490 | ||
|description=CAGE_peak_4_at_ENST00000456355_5end | |description=CAGE_peak_4_at_ENST00000456355_5end | ||
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|ontology_enrichment_celltype=CL:0000055!3.02e-31!180;CL:0002371!6.12e-22!591;CL:0000144!1.72e-19!625;CL:0000057!7.14e-18!75;CL:0000048!5.45e-15!430;CL:0000723!3.94e-14!436;CL:0000548!5.21e-14!679;CL:0000004!5.21e-14!679;CL:0000255!5.21e-14!679;CL:0000222!2.48e-13!119;CL:0000012!3.44e-13!682;CL:0000034!4.12e-13!444;CL:0000183!3.56e-11!59;CL:0000680!1.48e-10!57;CL:0000056!1.48e-10!57;CL:0000355!1.48e-10!57;CL:0000187!2.82e-10!54;CL:0000393!4.62e-10!60;CL:0000211!4.62e-10!60;CL:0002620!2.02e-09!23;CL:0000003!1.24e-08!722;CL:0000192!7.39e-08!42;CL:0000514!7.39e-08!42;CL:0002320!1.76e-07!365;CL:0000359!5.87e-07!32;CL:0000219!9.16e-07!390 | |ontology_enrichment_celltype=CL:0000055!3.02e-31!180;CL:0002371!6.12e-22!591;CL:0000144!1.72e-19!625;CL:0000057!7.14e-18!75;CL:0000048!5.45e-15!430;CL:0000723!3.94e-14!436;CL:0000548!5.21e-14!679;CL:0000004!5.21e-14!679;CL:0000255!5.21e-14!679;CL:0000222!2.48e-13!119;CL:0000012!3.44e-13!682;CL:0000034!4.12e-13!444;CL:0000183!3.56e-11!59;CL:0000680!1.48e-10!57;CL:0000056!1.48e-10!57;CL:0000355!1.48e-10!57;CL:0000187!2.82e-10!54;CL:0000393!4.62e-10!60;CL:0000211!4.62e-10!60;CL:0002620!2.02e-09!23;CL:0000003!1.24e-08!722;CL:0000192!7.39e-08!42;CL:0000514!7.39e-08!42;CL:0002320!1.76e-07!365;CL:0000359!5.87e-07!32;CL:0000219!9.16e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.95e-10;23!CL:0000359;1.14e-08;32!CL:0000057;1.37e-07;73!CL:0000187;3.36e-07;55!CL:0002494;6.97e-07;16!CL:0000192;7.58e-07;43!CL:0000393;8.17e-07;61!CL:0000211;8.17e-07;61 | |ontology_enrichment_celltype_v019=CL:0002620;1.95e-10;23!CL:0000359;1.14e-08;32!CL:0000057;1.37e-07;73!CL:0000187;3.36e-07;55!CL:0002494;6.97e-07;16!CL:0000192;7.58e-07;43!CL:0000393;8.17e-07;61!CL:0000211;8.17e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.85e-19,76;CL:0000048,1.78e-17,427;CL:0000723,2.27e-16,433;CL:0000034,2.94e-15,441;CL:0000222,1.96e-13,121;CL:0000680,4.12e-12,58;CL:0000056,4.12e-12,58;CL:0000355,4.12e-12,58;CL:0000187,8.22e-12,55;CL:0000393,2.75e-11,61;CL:0000211,2.75e-11,61;CL:0002620,1.40e-10,23;CL:0000192,3.18e-09,43;CL:0000514,3.18e-09,43;CL:0002320,6.18e-09,361;CL:0000359,1.16e-08,32;CL:0000219,9.42e-08,386;CL:0000134,1.83e-07,354;CL:0002570,9.45e-07,8;CL:0002494,9.55e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;3.16e-07;58!CL:0000514;7.58e-07;43 | |ontology_enrichment_development_v019=CL:0000355;3.16e-07;58!CL:0000514;7.58e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.28e-14!84;UBERON:0004535!8.16e-14!110;UBERON:0002049!7.14e-13!79;UBERON:0007798!7.14e-13!79;UBERON:0003081!1.39e-12!216;UBERON:0000914!1.40e-12!83;UBERON:0002329!1.40e-12!83;UBERON:0003077!1.40e-12!83;UBERON:0003059!1.40e-12!83;UBERON:0007282!1.40e-12!83;UBERON:0009618!1.40e-12!83;UBERON:0007285!1.40e-12!83;UBERON:0001009!2.21e-12!113;UBERON:0000055!5.53e-12!69;UBERON:0001981!1.03e-11!60;UBERON:0007500!1.03e-11!60;UBERON:0004537!1.03e-11!60;UBERON:0006965!1.03e-11!60;UBERON:0004290!1.12e-11!70;UBERON:0001637!1.33e-11!42;UBERON:0003509!1.33e-11!42;UBERON:0004572!1.33e-11!42;UBERON:0002204!3.39e-11!167;UBERON:0000486!1.95e-09!82;UBERON:0001134!2.95e-09!61;UBERON:0002036!2.95e-09!61;UBERON:0003082!2.95e-09!61;UBERON:0000926!3.13e-09!448;UBERON:0004120!3.13e-09!448;UBERON:0006603!3.13e-09!448;UBERON:0002385!8.10e-09!63;UBERON:0001015!8.10e-09!63;UBERON:0000383!8.10e-09!63;UBERON:0004573!1.75e-08!33;UBERON:0004571!1.75e-08!33;UBERON:0001013!5.77e-08!14;UBERON:0002199!8.66e-08!45;UBERON:0002416!8.66e-08!45;UBERON:0003914!1.56e-07!118;UBERON:0002384!1.92e-07!375 | |ontology_enrichment_uberon=UBERON:0004872!2.28e-14!84;UBERON:0004535!8.16e-14!110;UBERON:0002049!7.14e-13!79;UBERON:0007798!7.14e-13!79;UBERON:0003081!1.39e-12!216;UBERON:0000914!1.40e-12!83;UBERON:0002329!1.40e-12!83;UBERON:0003077!1.40e-12!83;UBERON:0003059!1.40e-12!83;UBERON:0007282!1.40e-12!83;UBERON:0009618!1.40e-12!83;UBERON:0007285!1.40e-12!83;UBERON:0001009!2.21e-12!113;UBERON:0000055!5.53e-12!69;UBERON:0001981!1.03e-11!60;UBERON:0007500!1.03e-11!60;UBERON:0004537!1.03e-11!60;UBERON:0006965!1.03e-11!60;UBERON:0004290!1.12e-11!70;UBERON:0001637!1.33e-11!42;UBERON:0003509!1.33e-11!42;UBERON:0004572!1.33e-11!42;UBERON:0002204!3.39e-11!167;UBERON:0000486!1.95e-09!82;UBERON:0001134!2.95e-09!61;UBERON:0002036!2.95e-09!61;UBERON:0003082!2.95e-09!61;UBERON:0000926!3.13e-09!448;UBERON:0004120!3.13e-09!448;UBERON:0006603!3.13e-09!448;UBERON:0002385!8.10e-09!63;UBERON:0001015!8.10e-09!63;UBERON:0000383!8.10e-09!63;UBERON:0004573!1.75e-08!33;UBERON:0004571!1.75e-08!33;UBERON:0001013!5.77e-08!14;UBERON:0002199!8.66e-08!45;UBERON:0002416!8.66e-08!45;UBERON:0003914!1.56e-07!118;UBERON:0002384!1.92e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.88e-09;42!UBERON:0003509;1.88e-09;42!UBERON:0004572;1.88e-09;42!UBERON:0001013;3.99e-09;14!UBERON:0004573;1.02e-08;33!UBERON:0004571;1.02e-08;33!UBERON:0007500;1.81e-08;56!UBERON:0001981;1.81e-08;56!UBERON:0004537;1.81e-08;56!UBERON:0002049;9.76e-07;75!UBERON:0007798;9.76e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0001637;1.88e-09;42!UBERON:0003509;1.88e-09;42!UBERON:0004572;1.88e-09;42!UBERON:0001013;3.99e-09;14!UBERON:0004573;1.02e-08;33!UBERON:0004571;1.02e-08;33!UBERON:0007500;1.81e-08;56!UBERON:0001981;1.81e-08;56!UBERON:0004537;1.81e-08;56!UBERON:0002049;9.76e-07;75!UBERON:0007798;9.76e-07;75 | ||
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| ||
|short_description=p4@ENST00000456355 | |short_description=p4@ENST00000456355 | ||
}} | }} |
Latest revision as of 12:17, 23 July 2015
Short description: | p4@ENST00000456355 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000456355_5end |
Coexpression cluster: | C490_Hair_Fibroblast_Synoviocyte_Olfactory_Preadipocyte_Endothelial_Osteoblast |
Association with transcript: | -369bp_to_ENST00000456355_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.85e-19 | 76 |
multi fate stem cell | 1.78e-17 | 427 |
somatic stem cell | 2.27e-16 | 433 |
stem cell | 2.94e-15 | 441 |
mesodermal cell | 1.96e-13 | 121 |
muscle precursor cell | 4.12e-12 | 58 |
myoblast | 4.12e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.12e-12 | 58 |
muscle cell | 8.22e-12 | 55 |
electrically responsive cell | 2.75e-11 | 61 |
electrically active cell | 2.75e-11 | 61 |
skin fibroblast | 1.40e-10 | 23 |
smooth muscle cell | 3.18e-09 | 43 |
smooth muscle myoblast | 3.18e-09 | 43 |
connective tissue cell | 6.18e-09 | 361 |
vascular associated smooth muscle cell | 1.16e-08 | 32 |
motile cell | 9.42e-08 | 386 |
mesenchymal cell | 1.83e-07 | 354 |
mesenchymal stem cell of adipose | 9.45e-07 | 8 |
cardiocyte | 9.55e-07 | 16 |