FFCP PHASE1:Hg19::chr11:117712764..117712789,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117712764..117712789,- | |||
|coexpression_cluster_id=C866 | |coexpression_cluster_id=C866 | ||
|description=CAGE_peak_at_chr11:117712764..117712789,- | |description=CAGE_peak_at_chr11:117712764..117712789,- | ||
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|ontology_enrichment_celltype=CL:0002057!4.12e-67!42;CL:0002009!9.39e-64!65;CL:0002194!2.98e-62!63;CL:0000576!2.98e-62!63;CL:0000040!2.98e-62!63;CL:0000559!2.98e-62!63;CL:0000860!4.22e-62!45;CL:0000557!1.20e-57!71;CL:0000839!3.42e-55!70;CL:0000766!3.65e-50!76;CL:0000763!2.77e-33!112;CL:0000049!2.77e-33!112;CL:0002031!4.12e-33!124;CL:0002087!7.70e-33!119;CL:0000738!3.05e-28!140;CL:0002032!1.60e-22!165;CL:0000837!1.60e-22!165;CL:0000037!3.21e-21!172;CL:0000566!3.21e-21!172;CL:0000988!1.56e-19!182;CL:0002393!8.43e-13!9;CL:0002397!8.43e-13!9;CL:0002619!1.13e-11!3 | |ontology_enrichment_celltype=CL:0002057!4.12e-67!42;CL:0002009!9.39e-64!65;CL:0002194!2.98e-62!63;CL:0000576!2.98e-62!63;CL:0000040!2.98e-62!63;CL:0000559!2.98e-62!63;CL:0000860!4.22e-62!45;CL:0000557!1.20e-57!71;CL:0000839!3.42e-55!70;CL:0000766!3.65e-50!76;CL:0000763!2.77e-33!112;CL:0000049!2.77e-33!112;CL:0002031!4.12e-33!124;CL:0002087!7.70e-33!119;CL:0000738!3.05e-28!140;CL:0002032!1.60e-22!165;CL:0000837!1.60e-22!165;CL:0000037!3.21e-21!172;CL:0000566!3.21e-21!172;CL:0000988!1.56e-19!182;CL:0002393!8.43e-13!9;CL:0002397!8.43e-13!9;CL:0002619!1.13e-11!3 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.70e-34;39!CL:0000234;8.70e-34;39!CL:0000860;3.87e-32;33!CL:0002057;3.87e-32;33!CL:0000576;2.33e-21;48!CL:0000766;5.85e-18;69!CL:0000239;2.20e-16;3!CL:1000615;2.20e-16;3!CL:0002619;2.20e-16;3!CL:0002306;2.20e-16;3!CL:0002087;7.00e-10;104!CL:0000763;2.63e-09;100!CL:0000235;9.44e-09;6!CL:0000738;4.76e-07;136 | |ontology_enrichment_celltype_v019=CL:0000473;8.70e-34;39!CL:0000234;8.70e-34;39!CL:0000860;3.87e-32;33!CL:0002057;3.87e-32;33!CL:0000576;2.33e-21;48!CL:0000766;5.85e-18;69!CL:0000239;2.20e-16;3!CL:1000615;2.20e-16;3!CL:0002619;2.20e-16;3!CL:0002306;2.20e-16;3!CL:0002087;7.00e-10;104!CL:0000763;2.63e-09;100!CL:0000235;9.44e-09;6!CL:0000738;4.76e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.61e-36,59;CL:0000576,2.61e-36,59;CL:0000040,2.61e-36,59;CL:0000559,2.61e-36,59;CL:0002009,4.37e-35,61;CL:0000473,1.64e-33,48;CL:0000234,1.64e-33,48;CL:0000839,2.41e-32,66;CL:0000557,7.63e-32,67;CL:0000766,1.51e-29,72;CL:0000860,1.13e-26,42;CL:0002057,1.13e-26,42;CL:0002087,7.64e-21,115;CL:0002031,6.62e-20,120;CL:0000763,3.24e-19,108;CL:0000049,3.24e-19,108;CL:0000738,2.32e-17,136;CL:0000239,1.61e-16,3;CL:1000615,1.61e-16,3;CL:0002306,1.61e-16,3;CL:0002619,2.20e-16,3;CL:0002032,2.19e-14,161;CL:0000837,2.19e-14,161;CL:0000037,1.04e-13,168;CL:0000988,6.45e-13,177;CL:0000235,1.04e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.23e-15;42!CL:0000049;7.19e-09;108 | |ontology_enrichment_development_v019=CL:0002057;2.23e-15;42!CL:0000049;7.19e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.51e-50!80;UBERON:0001474!4.59e-46!86;UBERON:0002390!1.24e-39!102;UBERON:0003061!1.24e-39!102;UBERON:0004765!6.80e-38!101;UBERON:0001434!6.80e-38!101;UBERON:0002405!3.90e-36!115;UBERON:0002193!2.85e-35!112;UBERON:0002204!1.03e-20!167;UBERON:0003081!1.19e-20!216;UBERON:0000926!2.79e-09!448;UBERON:0004120!2.79e-09!448;UBERON:0006603!2.79e-09!448 | |ontology_enrichment_uberon=UBERON:0002371!3.51e-50!80;UBERON:0001474!4.59e-46!86;UBERON:0002390!1.24e-39!102;UBERON:0003061!1.24e-39!102;UBERON:0004765!6.80e-38!101;UBERON:0001434!6.80e-38!101;UBERON:0002405!3.90e-36!115;UBERON:0002193!2.85e-35!112;UBERON:0002204!1.03e-20!167;UBERON:0003081!1.19e-20!216;UBERON:0000926!2.79e-09!448;UBERON:0004120!2.79e-09!448;UBERON:0006603!2.79e-09!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.20e-16;3!UBERON:0007685;2.20e-16;3!UBERON:0004134;2.20e-16;3 | |ontology_enrichment_uberon_v019=UBERON:0006853;2.20e-16;3!UBERON:0007685;2.20e-16;3!UBERON:0004134;2.20e-16;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.32e-28,76;UBERON:0001474,8.77e-26,82;UBERON:0004765,2.30e-23,90;UBERON:0002405,1.45e-22,93;UBERON:0002390,2.46e-21,98;UBERON:0003061,2.46e-21,98;UBERON:0001434,7.04e-21,100;UBERON:0002193,3.24e-19,108;UBERON:0006853,1.61e-16,3;UBERON:0007685,1.61e-16,3;UBERON:0004134,1.61e-16,3;UBERON:0002204,8.07e-12,167;UBERON:0003081,2.15e-09,203 | |||
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|short_description=p@chr11:117712764..117712789,- | |short_description=p@chr11:117712764..117712789,- | ||
}} | }} |
Latest revision as of 18:39, 23 July 2015
Short description: | p@chr11:117712764..117712789, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117712764..117712789, - |
Coexpression cluster: | C866_hairy_CD14_mycosis_cord_Eosinophils_CD14CD16_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.61e-36 | 59 |
monocyte | 2.61e-36 | 59 |
monoblast | 2.61e-36 | 59 |
promonocyte | 2.61e-36 | 59 |
macrophage dendritic cell progenitor | 4.37e-35 | 61 |
defensive cell | 1.64e-33 | 48 |
phagocyte | 1.64e-33 | 48 |
myeloid lineage restricted progenitor cell | 2.41e-32 | 66 |
granulocyte monocyte progenitor cell | 7.63e-32 | 67 |
myeloid leukocyte | 1.51e-29 | 72 |
classical monocyte | 1.13e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-26 | 42 |
nongranular leukocyte | 7.64e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 6.62e-20 | 120 |
myeloid cell | 3.24e-19 | 108 |
common myeloid progenitor | 3.24e-19 | 108 |
leukocyte | 2.32e-17 | 136 |
brush border epithelial cell | 1.61e-16 | 3 |
kidney cortex tubule cell | 1.61e-16 | 3 |
epithelial cell of proximal tubule | 1.61e-16 | 3 |
adult endothelial progenitor cell | 2.20e-16 | 3 |
hematopoietic oligopotent progenitor cell | 2.19e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.19e-14 | 161 |
hematopoietic stem cell | 1.04e-13 | 168 |
hematopoietic cell | 6.45e-13 | 177 |
macrophage | 1.04e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.32e-28 | 76 |
bone element | 8.77e-26 | 82 |
skeletal element | 2.30e-23 | 90 |
immune system | 1.45e-22 | 93 |
hematopoietic system | 2.46e-21 | 98 |
blood island | 2.46e-21 | 98 |
skeletal system | 7.04e-21 | 100 |
hemolymphoid system | 3.24e-19 | 108 |
renal cortex tubule | 1.61e-16 | 3 |
region of nephron tubule | 1.61e-16 | 3 |
proximal tubule | 1.61e-16 | 3 |
musculoskeletal system | 8.07e-12 | 167 |
lateral plate mesoderm | 2.15e-09 | 203 |