FFCP PHASE1:Hg19::chr10:6346994..6346999,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:6346994..6346999,+ | |||
|description=CAGE_peak_at_chr10:6346994..6346999,+ | |description=CAGE_peak_at_chr10:6346994..6346999,+ | ||
|id=chr10:6346994..6346999,+ | |id=chr10:6346994..6346999,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.54e-08!42;CL:0000738!2.92e-07!140;CL:0000860!5.50e-07!45;CL:0002393!6.91e-07!9;CL:0002397!6.91e-07!9 | |ontology_enrichment_celltype=CL:0002057!5.54e-08!42;CL:0000738!2.92e-07!140;CL:0000860!5.50e-07!45;CL:0002393!6.91e-07!9;CL:0002397!6.91e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.54e-08;3!CL:0000081;2.82e-08;11!CL:0000094;7.00e-07;8 | |ontology_enrichment_celltype_v019=CL:0000775;2.54e-08;3!CL:0000081;2.82e-08;11!CL:0000094;7.00e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.20e-08,3;CL:0000081,2.20e-08,11;CL:0000094,6.47e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.54e-08;3!UBERON:0003057;4.54e-08;3 | |ontology_enrichment_development_v019=UBERON:0006241;4.54e-08;3!UBERON:0003057;4.54e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.68e-21!115;UBERON:0001049!4.01e-11!57;UBERON:0005068!4.01e-11!57;UBERON:0006241!4.01e-11!57;UBERON:0007135!4.01e-11!57;UBERON:0001017!3.04e-09!82;UBERON:0005743!5.19e-09!86;UBERON:0002616!3.12e-08!59;UBERON:0002780!4.29e-08!41;UBERON:0001890!4.29e-08!41;UBERON:0006240!4.29e-08!41;UBERON:0001893!5.71e-08!34;UBERON:0002020!6.32e-08!34;UBERON:0003528!6.32e-08!34;UBERON:0000073!8.98e-08!94;UBERON:0001016!8.98e-08!94;UBERON:0003080!9.69e-08!42;UBERON:0002791!2.28e-07!33;UBERON:0000955!3.01e-07!69;UBERON:0006238!3.01e-07!69;UBERON:0001869!5.21e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!2.68e-21!115;UBERON:0001049!4.01e-11!57;UBERON:0005068!4.01e-11!57;UBERON:0006241!4.01e-11!57;UBERON:0007135!4.01e-11!57;UBERON:0001017!3.04e-09!82;UBERON:0005743!5.19e-09!86;UBERON:0002616!3.12e-08!59;UBERON:0002780!4.29e-08!41;UBERON:0001890!4.29e-08!41;UBERON:0006240!4.29e-08!41;UBERON:0001893!5.71e-08!34;UBERON:0002020!6.32e-08!34;UBERON:0003528!6.32e-08!34;UBERON:0000073!8.98e-08!94;UBERON:0001016!8.98e-08!94;UBERON:0003080!9.69e-08!42;UBERON:0002791!2.28e-07!33;UBERON:0000955!3.01e-07!69;UBERON:0006238!3.01e-07!69;UBERON:0001869!5.21e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;2.54e-08;3!UBERON:0005290;2.54e-08;3!UBERON:0002240;4.54e-08;3!UBERON:0005174;4.54e-08;3!UBERON:0001137;4.54e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001896;2.54e-08;3!UBERON:0005290;2.54e-08;3!UBERON:0002240;4.54e-08;3!UBERON:0005174;4.54e-08;3!UBERON:0001137;4.54e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.81e-09,114;UBERON:0001896,2.04e-08,3;UBERON:0005290,2.04e-08,3;UBERON:0010096,2.04e-08,3;UBERON:0002240,2.74e-08,3;UBERON:0005174,2.74e-08,3;UBERON:0001137,2.74e-08,3;UBERON:0001049,6.43e-08,56;UBERON:0005068,6.43e-08,56;UBERON:0006241,6.43e-08,56;UBERON:0007135,6.43e-08,56;UBERON:0001016,1.98e-07,89;UBERON:0001017,3.64e-07,81;UBERON:0000029,5.89e-07,1 | |||
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| ||
|short_description=p@chr10:6346994..6346999,+ | |short_description=p@chr10:6346994..6346999,+ | ||
}} | }} |
Latest revision as of 14:33, 23 July 2015
Short description: | p@chr10:6346994..6346999, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:6346994..6346999, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.20e-08 | 3 |
blood cell | 2.20e-08 | 11 |
granulocyte | 6.47e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.81e-09 | 114 |
medulla oblongata | 2.04e-08 | 3 |
myelencephalon | 2.04e-08 | 3 |
future myelencephalon | 2.04e-08 | 3 |
spinal cord | 2.74e-08 | 3 |
dorsal region element | 2.74e-08 | 3 |
dorsum | 2.74e-08 | 3 |
neural tube | 6.43e-08 | 56 |
neural rod | 6.43e-08 | 56 |
future spinal cord | 6.43e-08 | 56 |
neural keel | 6.43e-08 | 56 |
nervous system | 1.98e-07 | 89 |
central nervous system | 3.64e-07 | 81 |
lymph node | 5.89e-07 | 1 |