FFCP PHASE1:Hg19::chr3:38065993..38066017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5333 | |EntrezGene=5333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9060 | |HGNC=9060 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_ENST00000473834_5end | |association_with_transcript=49bp_to_ENST00000473834_5end | ||
|cluster_id=chr3:38065993..38066017,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_3_at_PLCD1_5end | |description=CAGE_peak_3_at_PLCD1_5end | ||
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|ontology_enrichment_celltype=CL:0000791!1.20e-12!18;CL:0000789!1.20e-12!18;CL:0002420!1.20e-12!18;CL:0002419!1.20e-12!18;CL:0000790!1.20e-12!18;CL:0000084!1.24e-09!25;CL:0000827!1.24e-09!25;CL:0000625!9.77e-09!11 | |ontology_enrichment_celltype=CL:0000791!1.20e-12!18;CL:0000789!1.20e-12!18;CL:0002420!1.20e-12!18;CL:0002419!1.20e-12!18;CL:0000790!1.20e-12!18;CL:0000084!1.24e-09!25;CL:0000827!1.24e-09!25;CL:0000625!9.77e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.90e-15;18!CL:0000789;2.90e-15;18!CL:0002419;2.90e-15;18!CL:0000084;5.15e-12;25!CL:0000625;1.36e-10;11 | |ontology_enrichment_celltype_v019=CL:0000791;2.90e-15;18!CL:0000789;2.90e-15;18!CL:0002419;2.90e-15;18!CL:0000084;5.15e-12;25!CL:0000625;1.36e-10;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.34e-15,18;CL:0000789,2.34e-15,18;CL:0002420,2.34e-15,18;CL:0002419,2.34e-15,18;CL:0000790,2.34e-15,18;CL:0000084,8.84e-12,25;CL:0000827,8.84e-12,25;CL:0000625,1.71e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.90e-15;18 | |ontology_enrichment_development_v019=CL:0000790;2.90e-15;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.44e-22!115;UBERON:0002616!1.19e-08!59;UBERON:0001049!1.34e-08!57;UBERON:0005068!1.34e-08!57;UBERON:0006241!1.34e-08!57;UBERON:0007135!1.34e-08!57;UBERON:0000955!7.73e-08!69;UBERON:0006238!7.73e-08!69;UBERON:0003080!7.89e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!1.44e-22!115;UBERON:0002616!1.19e-08!59;UBERON:0001049!1.34e-08!57;UBERON:0005068!1.34e-08!57;UBERON:0006241!1.34e-08!57;UBERON:0007135!1.34e-08!57;UBERON:0000955!7.73e-08!69;UBERON:0006238!7.73e-08!69;UBERON:0003080!7.89e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.95e-07;15!UBERON:0000179;2.95e-07;15!UBERON:0000463;2.95e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.95e-07;15!UBERON:0000179;2.95e-07;15!UBERON:0000463;2.95e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.45e-25,114;UBERON:0000073,6.21e-09,53;UBERON:0002616,6.21e-09,53;UBERON:0001049,6.48e-09,56;UBERON:0005068,6.48e-09,56;UBERON:0006241,6.48e-09,56;UBERON:0007135,6.48e-09,56;UBERON:0000955,1.32e-07,68;UBERON:0006238,1.32e-07,68;UBERON:0000178,3.16e-07,15;UBERON:0000179,3.16e-07,15;UBERON:0000463,3.16e-07,15;UBERON:0002780,4.10e-07,41;UBERON:0001890,4.10e-07,41;UBERON:0003080,4.10e-07,41;UBERON:0006240,4.10e-07,41 | |||
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| ||
|short_description=p3@PLCD1 | |short_description=p3@PLCD1 | ||
}} | }} |
Latest revision as of 03:00, 18 September 2015
Short description: | p3@PLCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLCD1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 49bp_to_ENST00000473834_5end |
EntrezGene: | PLCD1 |
HGNC: | 9060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.34e-15 | 18 |
alpha-beta T cell | 2.34e-15 | 18 |
immature T cell | 2.34e-15 | 18 |
mature T cell | 2.34e-15 | 18 |
immature alpha-beta T cell | 2.34e-15 | 18 |
T cell | 8.84e-12 | 25 |
pro-T cell | 8.84e-12 | 25 |
CD8-positive, alpha-beta T cell | 1.71e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.45e-25 | 114 |
regional part of nervous system | 6.21e-09 | 53 |
regional part of brain | 6.21e-09 | 53 |
neural tube | 6.48e-09 | 56 |
neural rod | 6.48e-09 | 56 |
future spinal cord | 6.48e-09 | 56 |
neural keel | 6.48e-09 | 56 |
brain | 1.32e-07 | 68 |
future brain | 1.32e-07 | 68 |
blood | 3.16e-07 | 15 |
haemolymphatic fluid | 3.16e-07 | 15 |
organism substance | 3.16e-07 | 15 |
regional part of forebrain | 4.10e-07 | 41 |
forebrain | 4.10e-07 | 41 |
anterior neural tube | 4.10e-07 | 41 |
future forebrain | 4.10e-07 | 41 |