FFCP PHASE1:Hg19::chr1:44444865..44444930,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8704 | |EntrezGene=8704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=925 | |HGNC=925 | ||
|TSSclassifier=strong | |||
|UniProt=O60909 | |UniProt=O60909 | ||
|association_with_transcript=0bp_to_ENST00000372324,ENST00000497866,NM_003780,uc001clg.2,uc001clh.2_5end | |association_with_transcript=0bp_to_ENST00000372324,ENST00000497866,NM_003780,uc001clg.2,uc001clh.2_5end | ||
|cluster_id=chr1:44444865..44444930,+ | |||
|coexpression_cluster_id=C1147 | |coexpression_cluster_id=C1147 | ||
|description=CAGE_peak_1_at_B4GALT2_5end | |description=CAGE_peak_1_at_B4GALT2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.67e-29!180;CL:0000220!3.85e-24!246;CL:0002321!4.06e-24!248;CL:0000222!1.91e-16!119;CL:0000183!1.93e-14!59;CL:0000393!5.04e-13!60;CL:0000211!5.04e-13!60;CL:0000187!1.84e-12!54;CL:0000680!1.86e-12!57;CL:0000056!1.86e-12!57;CL:0000355!1.86e-12!57;CL:0000057!2.03e-12!75;CL:0000192!5.56e-12!42;CL:0000514!5.56e-12!42;CL:0000359!7.17e-11!32;CL:0000221!1.41e-09!71;CL:0000066!1.27e-08!254;CL:0000548!1.60e-07!679;CL:0000004!1.60e-07!679;CL:0000255!1.60e-07!679;CL:0002371!2.26e-07!591;CL:0000133!2.55e-07!59;CL:0002078!3.09e-07!44;CL:0000012!4.98e-07!682;CL:0000144!5.56e-07!625 | |ontology_enrichment_celltype=CL:0000055!5.67e-29!180;CL:0000220!3.85e-24!246;CL:0002321!4.06e-24!248;CL:0000222!1.91e-16!119;CL:0000183!1.93e-14!59;CL:0000393!5.04e-13!60;CL:0000211!5.04e-13!60;CL:0000187!1.84e-12!54;CL:0000680!1.86e-12!57;CL:0000056!1.86e-12!57;CL:0000355!1.86e-12!57;CL:0000057!2.03e-12!75;CL:0000192!5.56e-12!42;CL:0000514!5.56e-12!42;CL:0000359!7.17e-11!32;CL:0000221!1.41e-09!71;CL:0000066!1.27e-08!254;CL:0000548!1.60e-07!679;CL:0000004!1.60e-07!679;CL:0000255!1.60e-07!679;CL:0002371!2.26e-07!591;CL:0000133!2.55e-07!59;CL:0002078!3.09e-07!44;CL:0000012!4.98e-07!682;CL:0000144!5.56e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.14e-10;32!CL:0000192;6.41e-09;43!CL:0000187;2.63e-07;55!CL:0000349;5.22e-07;19 | |ontology_enrichment_celltype_v019=CL:0000359;3.14e-10;32!CL:0000192;6.41e-09;43!CL:0000187;2.63e-07;55!CL:0000349;5.22e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.91e-24,250;CL:0000222,1.68e-16,121;CL:0000057,7.04e-13,76;CL:0000393,1.03e-12,61;CL:0000211,1.03e-12,61;CL:0000680,3.79e-12,58;CL:0000056,3.79e-12,58;CL:0000355,3.79e-12,58;CL:0000187,3.87e-12,55;CL:0000192,1.34e-11,43;CL:0000514,1.34e-11,43;CL:0000359,7.05e-11,32;CL:0000221,7.82e-10,72;CL:0000066,1.18e-08,253;CL:0002078,1.72e-07,45;CL:0000133,2.52e-07,59;CL:0000349,5.54e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;6.41e-09;43 | |ontology_enrichment_development_v019=CL:0000514;6.41e-09;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;3.64e-09;42!UBERON:0003509;3.64e-09;42!UBERON:0004572;3.64e-09;42!UBERON:0003914;8.24e-09;74!UBERON:0004573;1.53e-08;33!UBERON:0004571;1.53e-08;33!UBERON:0007500;1.92e-08;56!UBERON:0001981;1.92e-08;56!UBERON:0004537;1.92e-08;56!UBERON:0000055;9.96e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001637;3.64e-09;42!UBERON:0003509;3.64e-09;42!UBERON:0004572;3.64e-09;42!UBERON:0003914;8.24e-09;74!UBERON:0004573;1.53e-08;33!UBERON:0004571;1.53e-08;33!UBERON:0007500;1.92e-08;56!UBERON:0001981;1.92e-08;56!UBERON:0004537;1.92e-08;56!UBERON:0000055;9.96e-07;65 | ||
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| ||
|short_description=p1@B4GALT2 | |short_description=p1@B4GALT2 | ||
}} | }} |
Latest revision as of 05:39, 18 September 2015
Short description: | p1@B4GALT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B4GALT2_5end |
Coexpression cluster: | C1147_Mesenchymal_Renal_Alveolar_Fibroblast_Placental_Pericytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000372324, ENST00000497866, NM_003780, uc001clg.2, uc001clh.2_5end |
EntrezGene: | B4GALT2 |
HGNC: | 925 |
UniProt: | O60909 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.91e-24 | 250 |
mesodermal cell | 1.68e-16 | 121 |
fibroblast | 7.04e-13 | 76 |
electrically responsive cell | 1.03e-12 | 61 |
electrically active cell | 1.03e-12 | 61 |
muscle precursor cell | 3.79e-12 | 58 |
myoblast | 3.79e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.79e-12 | 58 |
muscle cell | 3.87e-12 | 55 |
smooth muscle cell | 1.34e-11 | 43 |
smooth muscle myoblast | 1.34e-11 | 43 |
vascular associated smooth muscle cell | 7.05e-11 | 32 |
ectodermal cell | 7.82e-10 | 72 |
epithelial cell | 1.18e-08 | 253 |
meso-epithelial cell | 1.72e-07 | 45 |
neurectodermal cell | 2.52e-07 | 59 |
extraembryonic cell | 5.54e-07 | 19 |