FFCP PHASE1:Hg19::chr2:237683203..237683210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:237683203..237683210,+ | |||
|coexpression_cluster_id=C323 | |coexpression_cluster_id=C323 | ||
|description=CAGE_peak_at_chr2:237683203..237683210,+ | |description=CAGE_peak_at_chr2:237683203..237683210,+ | ||
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|ontology_enrichment_celltype=CL:0000349!1.14e-36!3;CL:0002577!1.14e-36!3;CL:0002541!1.24e-35!3;CL:0002536!5.58e-25!2;CL:0002537!9.01e-22!5 | |ontology_enrichment_celltype=CL:0000349!1.14e-36!3;CL:0002577!1.14e-36!3;CL:0002541!1.24e-35!3;CL:0002536!5.58e-25!2;CL:0002537!9.01e-22!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.46e-82;19!CL:0002577;7.81e-75;3!CL:0002536;2.42e-50;2!CL:0002541;2.09e-33;3 | |ontology_enrichment_celltype_v019=CL:0000349;1.46e-82;19!CL:0002577;7.81e-75;3!CL:0002536;2.42e-50;2!CL:0002541;2.09e-33;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.46e-82,19;CL:0002577,7.81e-75,3;CL:0002536,2.42e-50,2;CL:0002541,2.09e-33,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.42e-100!14;UBERON:0000158!2.42e-100!14;UBERON:0003124!2.10e-60!7;UBERON:0000478!4.57e-58!24;UBERON:0000305!3.86e-42!7;UBERON:0004871!6.83e-37!8;UBERON:0000476!1.24e-35!3;UBERON:0000920!1.24e-35!3;UBERON:0001987!1.08e-27!4;UBERON:0004340!1.08e-27!4;UBERON:0004923!1.04e-23!57 | |ontology_enrichment_uberon=UBERON:0005631!2.42e-100!14;UBERON:0000158!2.42e-100!14;UBERON:0003124!2.10e-60!7;UBERON:0000478!4.57e-58!24;UBERON:0000305!3.86e-42!7;UBERON:0004871!6.83e-37!8;UBERON:0000476!1.24e-35!3;UBERON:0000920!1.24e-35!3;UBERON:0001987!1.08e-27!4;UBERON:0004340!1.08e-27!4;UBERON:0004923!1.04e-23!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.90e-65;24!UBERON:0005631;2.55e-61;10!UBERON:0000158;2.55e-61;10!UBERON:0001987;2.15e-56;4!UBERON:0003124;2.09e-33;3!UBERON:0000920;2.09e-33;3!UBERON:0000305;2.08e-32;7!UBERON:0004923;2.79e-09;55!UBERON:0000077;5.14e-09;27 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.90e-65;24!UBERON:0005631;2.55e-61;10!UBERON:0000158;2.55e-61;10!UBERON:0001987;2.15e-56;4!UBERON:0003124;2.09e-33;3!UBERON:0000920;2.09e-33;3!UBERON:0000305;2.08e-32;7!UBERON:0004923;2.79e-09;55!UBERON:0000077;5.14e-09;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.03e-112,14;UBERON:0000158,7.03e-112,14;UBERON:0003124,1.05e-87,7;UBERON:0000478,1.90e-65,24;UBERON:0001987,2.15e-56,4;UBERON:0004340,2.15e-56,4;UBERON:0000920,2.09e-33,3;UBERON:0000305,2.08e-32,7;UBERON:0004871,1.80e-28,8;UBERON:0004923,5.87e-24,66;UBERON:0000995,2.11e-11,21;UBERON:0005795,6.47e-11,22;UBERON:0003975,6.47e-11,22;UBERON:0004175,1.10e-09,25;UBERON:0000077,1.95e-08,29;UBERON:0003134,9.68e-07,37;UBERON:0000474,9.68e-07,37 | |||
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|short_description=p@chr2:237683203..237683210,+ | |short_description=p@chr2:237683203..237683210,+ | ||
}} | }} |
Latest revision as of 08:08, 29 July 2015
Short description: | p@chr2:237683203..237683210, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:237683203..237683210, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.46e-82 | 19 |
placental epithelial cell | 7.81e-75 | 3 |
amniotic epithelial cell | 2.42e-50 | 2 |
chorionic membrane mesenchymal stem cell | 2.09e-33 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.03e-112 | 14 |
membranous layer | 7.03e-112 | 14 |
chorion | 1.05e-87 | 7 |
extraembryonic structure | 1.90e-65 | 24 |
placenta | 2.15e-56 | 4 |
allantois | 2.15e-56 | 4 |
egg chorion | 2.09e-33 | 3 |
amnion | 2.08e-32 | 7 |
somatic layer of lateral plate mesoderm | 1.80e-28 | 8 |
organ component layer | 5.87e-24 | 66 |
uterus | 2.11e-11 | 21 |
embryonic uterus | 6.47e-11 | 22 |
internal female genitalia | 6.47e-11 | 22 |
internal genitalia | 1.10e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 1.95e-08 | 29 |
female reproductive organ | 9.68e-07 | 37 |
female reproductive system | 9.68e-07 | 37 |