FFCP PHASE1:Hg19::chr11:57154878..57154895,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:57154878..57154895,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_at_chr11:57154878..57154895,- | |description=CAGE_peak_at_chr11:57154878..57154895,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!2.73e-27!3 | |ontology_enrichment_celltype=CL:0002541!2.73e-27!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.91e-39;3!CL:0000349;3.16e-14;19!CL:0002537;5.70e-07;5 | |ontology_enrichment_celltype_v019=CL:0002541;6.91e-39;3!CL:0000349;3.16e-14;19!CL:0002537;5.70e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.91e-39,3;CL:0000349,3.16e-14,19;CL:0002537,5.70e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!1.73e-10!8;DOID:225!2.37e-10!1;DOID:8552!2.59e-10!1;DOID:1240!1.09e-07!39;DOID:8692!5.84e-07!31 | |ontology_enrichment_disease=DOID:1036!1.73e-10!8;DOID:225!2.37e-10!1;DOID:8552!2.59e-10!1;DOID:1240!1.09e-07!39;DOID:8692!5.84e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8552;3.16e-29;1!DOID:225;3.16e-29;1!DOID:74;2.37e-15;2!DOID:1036;4.07e-15;8!DOID:1287;2.43e-08;4 | |ontology_enrichment_disease_v019=DOID:8552;3.16e-29;1!DOID:225;3.16e-29;1!DOID:74;2.37e-15;2!DOID:1036;4.07e-15;8!DOID:1287;2.43e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:225,2.37e-29,1;DOID:8552,3.16e-29,1;DOID:74,2.05e-15,2;DOID:1036,4.37e-15,8;DOID:1287,2.26e-08,4;DOID:1240,3.39e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.73e-27!3;UBERON:0000920!2.73e-27!3;UBERON:0003124!1.54e-20!7;UBERON:0005631!8.47e-16!14;UBERON:0000158!8.47e-16!14;UBERON:0004177!2.35e-11!7;UBERON:0002363!1.07e-09!1;UBERON:0007647!1.07e-09!1;UBERON:0010115!1.07e-09!1;UBERON:0002370!2.54e-09!4;UBERON:0005058!2.54e-09!4;UBERON:0009113!2.54e-09!4;UBERON:0003295!2.54e-09!4;UBERON:0005562!2.54e-09!4;UBERON:0000478!3.76e-09!24 | |ontology_enrichment_uberon=UBERON:0000476!2.73e-27!3;UBERON:0000920!2.73e-27!3;UBERON:0003124!1.54e-20!7;UBERON:0005631!8.47e-16!14;UBERON:0000158!8.47e-16!14;UBERON:0004177!2.35e-11!7;UBERON:0002363!1.07e-09!1;UBERON:0007647!1.07e-09!1;UBERON:0010115!1.07e-09!1;UBERON:0002370!2.54e-09!4;UBERON:0005058!2.54e-09!4;UBERON:0009113!2.54e-09!4;UBERON:0003295!2.54e-09!4;UBERON:0005562!2.54e-09!4;UBERON:0000478!3.76e-09!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.91e-39;3!UBERON:0000920;6.91e-39;3!UBERON:0005631;2.78e-26;10!UBERON:0000158;2.78e-26;10!UBERON:0000478;2.04e-11;24 | |ontology_enrichment_uberon_v019=UBERON:0003124;6.91e-39;3!UBERON:0000920;6.91e-39;3!UBERON:0005631;2.78e-26;10!UBERON:0000158;2.78e-26;10!UBERON:0000478;2.04e-11;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.91e-39,3;UBERON:0005631,5.07e-19,14;UBERON:0000158,5.07e-19,14;UBERON:0003124,2.46e-17,7;UBERON:0000478,2.04e-11,24 | |||
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|short_description=p@chr11:57154878..57154895,- | |short_description=p@chr11:57154878..57154895,- | ||
}} | }} |
Latest revision as of 22:55, 23 July 2015
Short description: | p@chr11:57154878..57154895, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:57154878..57154895, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.91e-39 | 3 |
extraembryonic cell | 3.16e-14 | 19 |
amnion mesenchymal stem cell | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.91e-39 | 3 |
extraembryonic membrane | 5.07e-19 | 14 |
membranous layer | 5.07e-19 | 14 |
chorion | 2.46e-17 | 7 |
extraembryonic structure | 2.04e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
syndrome | 2.37e-29 | 1 |
chronic myeloid leukemia | 3.16e-29 | 1 |
hematopoietic system disease | 2.05e-15 | 2 |
chronic leukemia | 4.37e-15 | 8 |
cardiovascular system disease | 2.26e-08 | 4 |
leukemia | 3.39e-07 | 39 |