FFCP PHASE1:Hg19::chr17:38612812..38612823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38612812..38612823,+ | |||
|coexpression_cluster_id=C353 | |coexpression_cluster_id=C353 | ||
|description=CAGE_peak_at_chr17:38612812..38612823,+ | |description=CAGE_peak_at_chr17:38612812..38612823,+ | ||
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|ontology_enrichment_celltype_v019_2=CL:0000135,1.99e-11,3;CL:0000388,1.99e-11,3;CL:0002564,5.87e-11,3;CL:0002590,6.90e-10,3;CL:0000153,1.06e-09,9;CL:0000447,1.06e-09,9;CL:0000499,1.61e-08,28;CL:0000327,7.98e-08,15;CL:0002600,1.24e-07,2;CL:0000515,1.97e-07,4;CL:0002593,4.97e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000515;1.00e-07;4 | |ontology_enrichment_development_v019=CL:0000515;1.00e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p@chr17:38612812..38612823,+ | |short_description=p@chr17:38612812..38612823,+ | ||
}} | }} |
Latest revision as of 16:27, 25 July 2015
Short description: | p@chr17:38612812..38612823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38612812..38612823, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.99e-11 | 3 |
tendon cell | 1.99e-11 | 3 |
nucleus pulposus cell of intervertebral disc | 5.87e-11 | 3 |
smooth muscle cell of the brain vasculature | 6.90e-10 | 3 |
GAG secreting cell | 1.06e-09 | 9 |
carbohydrate secreting cell | 1.06e-09 | 9 |
stromal cell | 1.61e-08 | 28 |
extracellular matrix secreting cell | 7.98e-08 | 15 |
smooth muscle cell of trachea | 1.24e-07 | 2 |
skeletal muscle myoblast | 1.97e-07 | 4 |
smooth muscle cell of the internal thoracic artery | 4.97e-07 | 2 |