FFCP PHASE1:Hg19::chr20:30795511..30795562,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:30795511..30795562,-
|short_description=p1@PLAGL2
|description=CAGE_peak_1_at_PLAGL2_5end
|association_with_transcript=0bp_to_NM_002657,uc002wxn.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5326 | |EntrezGene=5326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9047 | |HGNC=9047 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UPG8 | |UniProt=Q9UPG8 | ||
|association_with_transcript=0bp_to_NM_002657,uc002wxn.2_5end | |||
|cluster_id=chr20:30795511..30795562,- | |||
|description=CAGE_peak_1_at_PLAGL2_5end | |||
|id=chr20:30795511..30795562,- | |||
|ontology_enrichment_celltype=CL:0000988!8.16e-32!182;CL:0000037!4.34e-31!172;CL:0000566!4.34e-31!172;CL:0002032!3.73e-28!165;CL:0000837!3.73e-28!165;CL:0000738!1.32e-23!140;CL:0000860!1.41e-22!45;CL:0002057!1.67e-22!42;CL:0000763!1.77e-22!112;CL:0000049!1.77e-22!112;CL:0002087!7.90e-20!119;CL:0002031!5.95e-19!124;CL:0000766!1.82e-17!76;CL:0000557!3.04e-14!71;CL:0000839!4.57e-14!70;CL:0002009!7.35e-14!65;CL:0002194!8.89e-14!63;CL:0000576!8.89e-14!63;CL:0000040!8.89e-14!63;CL:0000559!8.89e-14!63;CL:0002393!5.33e-07!9;CL:0002397!5.33e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-15;33!CL:0002057;1.06e-15;33!CL:0000576;7.25e-13;48!CL:0000473;6.52e-10;39!CL:0000234;6.52e-10;39!CL:0000766;1.21e-09;69!CL:0000763;9.71e-09;100!CL:0002087;2.11e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.94e-32,177;CL:0000037,2.29e-31,168;CL:0002032,2.04e-28,161;CL:0000837,2.04e-28,161;CL:0000738,6.87e-24,136;CL:0000763,7.11e-23,108;CL:0000049,7.11e-23,108;CL:0000860,1.67e-22,42;CL:0002057,1.67e-22,42;CL:0002087,3.98e-20,115;CL:0002031,3.30e-19,120;CL:0000766,5.57e-18,72;CL:0000473,7.07e-18,48;CL:0000234,7.07e-18,48;CL:0000557,1.14e-14,67;CL:0000839,1.71e-14,66;CL:0002009,2.50e-14,61;CL:0002194,2.91e-14,59;CL:0000576,2.91e-14,59;CL:0000040,2.91e-14,59;CL:0000559,2.91e-14,59;CL:0002393,5.33e-07,9;CL:0002397,5.33e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.15e-16;42!CL:0000049;5.01e-07;108 | |||
|ontology_enrichment_disease=DOID:162!7.70e-11!235;DOID:14566!7.87e-10!239;DOID:2531!8.26e-10!51;DOID:0060083!8.26e-10!51;DOID:1240!7.89e-08!39;DOID:0050686!9.77e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.70e-11,235;DOID:14566,7.87e-10,239;DOID:2531,8.26e-10,51;DOID:0060083,8.26e-10,51;DOID:1240,7.89e-08,39;DOID:0050686,9.77e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.20e-15!102;UBERON:0003061!4.20e-15!102;UBERON:0002193!1.39e-13!112;UBERON:0002371!4.35e-11!80;UBERON:0001474!5.22e-11!86;UBERON:0002405!4.75e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.32e-15,98;UBERON:0003061,2.32e-15,98;UBERON:0002193,9.12e-14,108;UBERON:0002371,2.50e-11,76;UBERON:0001474,3.23e-11,82;UBERON:0002405,1.11e-10,93;UBERON:0004765,3.32e-08,90 | |||
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| ||
|short_description=p1@PLAGL2 | |||
}} | }} |
Latest revision as of 02:40, 25 September 2015
Short description: | p1@PLAGL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLAGL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_002657, uc002wxn.2_5end |
EntrezGene: | PLAGL2 |
HGNC: | 9047 |
UniProt: | Q9UPG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.94e-32 | 177 |
hematopoietic stem cell | 2.29e-31 | 168 |
hematopoietic oligopotent progenitor cell | 2.04e-28 | 161 |
hematopoietic multipotent progenitor cell | 2.04e-28 | 161 |
leukocyte | 6.87e-24 | 136 |
myeloid cell | 7.11e-23 | 108 |
common myeloid progenitor | 7.11e-23 | 108 |
classical monocyte | 1.67e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.67e-22 | 42 |
nongranular leukocyte | 3.98e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 3.30e-19 | 120 |
myeloid leukocyte | 5.57e-18 | 72 |
defensive cell | 7.07e-18 | 48 |
phagocyte | 7.07e-18 | 48 |
granulocyte monocyte progenitor cell | 1.14e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.71e-14 | 66 |
macrophage dendritic cell progenitor | 2.50e-14 | 61 |
monopoietic cell | 2.91e-14 | 59 |
monocyte | 2.91e-14 | 59 |
monoblast | 2.91e-14 | 59 |
promonocyte | 2.91e-14 | 59 |
intermediate monocyte | 5.33e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.32e-15 | 98 |
blood island | 2.32e-15 | 98 |
hemolymphoid system | 9.12e-14 | 108 |
bone marrow | 2.50e-11 | 76 |
bone element | 3.23e-11 | 82 |
immune system | 1.11e-10 | 93 |
skeletal element | 3.32e-08 | 90 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.70e-11 | 235 |
disease of cellular proliferation | 7.87e-10 | 239 |
hematologic cancer | 8.26e-10 | 51 |
immune system cancer | 8.26e-10 | 51 |
leukemia | 7.89e-08 | 39 |
organ system cancer | 9.77e-07 | 137 |