FFCP PHASE1:Hg19::chr3:42004048..42004069,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:42004048..42004069,+ | |||
|coexpression_cluster_id=C4272 | |coexpression_cluster_id=C4272 | ||
|description=CAGE_peak_at_chr3:42004048..42004069,+ | |description=CAGE_peak_at_chr3:42004048..42004069,+ | ||
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|ontology_enrichment_celltype=CL:0000738!3.06e-17!140;CL:0000037!1.24e-16!172;CL:0000566!1.24e-16!172;CL:0000988!1.63e-15!182;CL:0002032!1.76e-15!165;CL:0000837!1.76e-15!165;CL:0002057!1.95e-14!42;CL:0000860!3.48e-14!45;CL:0002031!9.78e-14!124;CL:0000766!1.87e-13!76;CL:0002087!1.82e-12!119;CL:0000763!9.56e-12!112;CL:0000049!9.56e-12!112;CL:0000557!1.54e-11!71;CL:0000839!1.64e-09!70;CL:0002320!2.34e-09!365;CL:0002009!3.93e-09!65;CL:0000134!1.61e-08!358;CL:0002194!1.87e-08!63;CL:0000576!1.87e-08!63;CL:0000040!1.87e-08!63;CL:0000559!1.87e-08!63;CL:0000219!2.77e-07!390;CL:0002393!3.73e-07!9;CL:0002397!3.73e-07!9 | |ontology_enrichment_celltype=CL:0000738!3.06e-17!140;CL:0000037!1.24e-16!172;CL:0000566!1.24e-16!172;CL:0000988!1.63e-15!182;CL:0002032!1.76e-15!165;CL:0000837!1.76e-15!165;CL:0002057!1.95e-14!42;CL:0000860!3.48e-14!45;CL:0002031!9.78e-14!124;CL:0000766!1.87e-13!76;CL:0002087!1.82e-12!119;CL:0000763!9.56e-12!112;CL:0000049!9.56e-12!112;CL:0000557!1.54e-11!71;CL:0000839!1.64e-09!70;CL:0002320!2.34e-09!365;CL:0002009!3.93e-09!65;CL:0000134!1.61e-08!358;CL:0002194!1.87e-08!63;CL:0000576!1.87e-08!63;CL:0000040!1.87e-08!63;CL:0000559!1.87e-08!63;CL:0000219!2.77e-07!390;CL:0002393!3.73e-07!9;CL:0002397!3.73e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000094;4.11e-11;8!CL:0000766;4.49e-11;69!CL:0000576;2.63e-10;48!CL:0002393;1.21e-09;6!CL:0002397;1.21e-09;6!CL:0000767;9.00e-09;3!CL:0000623;1.27e-08;3!CL:0000081;7.98e-08;11!CL:0000875;2.33e-07;3!CL:0002396;2.33e-07;3!CL:0000791;3.19e-07;18!CL:0000789;3.19e-07;18!CL:0002419;3.19e-07;18!CL:0002087;8.17e-07;104 | |ontology_enrichment_celltype_v019=CL:0000094;4.11e-11;8!CL:0000766;4.49e-11;69!CL:0000576;2.63e-10;48!CL:0002393;1.21e-09;6!CL:0002397;1.21e-09;6!CL:0000767;9.00e-09;3!CL:0000623;1.27e-08;3!CL:0000081;7.98e-08;11!CL:0000875;2.33e-07;3!CL:0002396;2.33e-07;3!CL:0000791;3.19e-07;18!CL:0000789;3.19e-07;18!CL:0002419;3.19e-07;18!CL:0002087;8.17e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.70e-29,136;CL:0000037,5.79e-29,168;CL:0000988,1.02e-26,177;CL:0002032,1.09e-26,161;CL:0000837,1.09e-26,161;CL:0002031,2.21e-22,120;CL:0000766,7.89e-21,72;CL:0002087,1.79e-19,115;CL:0000763,7.10e-18,108;CL:0000049,7.10e-18,108;CL:0000860,2.39e-16,42;CL:0002057,2.39e-16,42;CL:0000557,7.11e-16,67;CL:0002393,1.12e-15,9;CL:0002397,1.12e-15,9;CL:0002320,2.41e-15,361;CL:0000134,3.04e-15,354;CL:0000473,1.26e-13,48;CL:0000234,1.26e-13,48;CL:0000839,2.12e-13,66;CL:0000219,2.20e-12,386;CL:0002009,7.79e-12,61;CL:0002194,3.71e-11,59;CL:0000576,3.71e-11,59;CL:0000040,3.71e-11,59;CL:0000559,3.71e-11,59;CL:0000094,4.07e-11,8;CL:0000034,9.78e-11,441;CL:0000048,2.51e-10,427;CL:0000723,6.04e-10,433;CL:0000767,9.44e-09,3;CL:0000838,1.03e-08,52;CL:0000623,1.30e-08,3;CL:0000825,1.30e-08,3;CL:0000542,1.81e-08,53;CL:0000051,1.81e-08,53;CL:0000081,7.92e-08,11;CL:0000875,1.04e-07,3;CL:0002396,1.04e-07,3;CL:0000791,3.99e-07,18;CL:0000789,3.99e-07,18;CL:0002420,3.99e-07,18;CL:0002419,3.99e-07,18;CL:0000790,3.99e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.37e-11;42!CL:0000790;3.19e-07;18 | |ontology_enrichment_development_v019=CL:0002057;3.37e-11;42!CL:0000790;3.19e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.61e-12!86;UBERON:0002371!4.09e-12!80;UBERON:0002384!1.56e-09!375;UBERON:0004765!1.70e-09!101;UBERON:0001434!1.70e-09!101;UBERON:0002390!2.69e-09!102;UBERON:0003061!2.69e-09!102;UBERON:0002193!4.42e-07!112 | |ontology_enrichment_uberon=UBERON:0001474!2.61e-12!86;UBERON:0002371!4.09e-12!80;UBERON:0002384!1.56e-09!375;UBERON:0004765!1.70e-09!101;UBERON:0001434!1.70e-09!101;UBERON:0002390!2.69e-09!102;UBERON:0003061!2.69e-09!102;UBERON:0002193!4.42e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.40e-16,76;UBERON:0001474,1.39e-15,82;UBERON:0004765,1.15e-14,90;UBERON:0002384,1.87e-14,371;UBERON:0002390,6.79e-13,98;UBERON:0003061,6.79e-13,98;UBERON:0002405,7.36e-13,93;UBERON:0001434,2.07e-12,100;UBERON:0002193,5.52e-11,108 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0.251085279189606,0,0.0821005894499457,0.236132343941038,9.8341069212226,6.1412703695554,7.27635779585557,0,0.30120591877825,0.369754010166788,0,0.426507697462265,8.22081230137572,1.66198622559563,0.401088894940283,3.03815219002193,0.223915474239924,0,0,0,0.377875943688809,1.94067248950253,0.929716147622738,0,1.23882548358041,0.28769239232215,0.256160706529101,2.83778675866302,1.72372840368309,0,1.35426486594342,0.376484679085209,0.272906150057846,1.12361742222542,0.612167784741805,0.320929027076094,2.55734850319616,0,0.997318288108159,1.70489900213078,0.580418477257168,0.56738522469114,0.622822248995575,1.7587406567972,0.521482918420201,1.73751075764093,0.605399502633369,0,2.53169909952708,1.69004229049553,2.12604299965044,3.77385561915077,0.22465726229299,0.901061357049038,1.6072558669708,1.99508920618874,1.59133341759272,3.83594722905731,0,0,0,0.853460445133014,0,0.574752439954483,0,0.954053754535364,6.83055562931338,1.76171156811282,3.82273228125229,5.28685314316103,0,2.89722493252585,2.55722701147983,1.17903228824749,3.90642848099067,0,0,0,1.94826728407911,0.668462741311041,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0,0.164437904603676,0.276350017785848,0,1.03800594213442,0.802622484269139,0,0.226618685395132,2.68254345521345,2.74901956386104,0.506039384039006,0,0,0,1.05402583354441,0.255973222308837,0,0,0,5.44338206706778,3.7441627409691,3.47578569318718,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.226864366320042,1.07633781413317,0,0,0.600182192168805,0,1.8034837803194,0,0.506328996723799,0.0974370051611986,0.252433774244115,0,0.323292113637624,2.4850671476163,0.10075209822764,0,0,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0.252320850875628,0.72995471815166,0,0,1.38134921352481,2.3218396401599,0.721879481669586,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0.492663237895943,0.176096868026452,4.76854665743776,8.79131715843465,7.44830357215642,0.317489471460845,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0.57191197463259,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,2.85273810081437,0.144781306667579,0,0,0,4.72873824484625,5.17506179662842,7.9572682493444,0.508189248444927,0,0.773288812777695,0.670065061337395,0,0.749007023947182,0,2.48649308061621,1.47229790062968,0.500170521059677,0.271265023699736,0,1.24900292158013,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0.413536052245775,1.94142780736755,0.320182673410333,0,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0,0,0.0821271560138091,1.55776328755086,0,0.120859449591622,0,0,0,0,0,0,0.231046011313244,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.192190067365106,1.53135254993501,0.10115778085555,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0,0.855877976067841,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0.75894634753143,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.06824071127473,0.962479855263359,0.245040215981032,0,1.00988449083511,0.0711418433484141,0.318852545457645,0.59873811429845,1.7235483311913,0,0,0.842391534340376,0,0.156679895773023,2.50634477090067,0.169291777801603,0,0.201799707191048,0,0,0,0,3.33698283423817,0.19538809540204,0,0,0.811367035427949,0,1.4098700508785,0.561421621224659,0,0.242721043499027,0.334330152832435,0.284136146806413,0,0,0.614321404198464,0.994147647766298,0.562677665642051,0,0.659215496907038,0.211125408127993,0,0,0.251932747854276,0.20453736500431,0.246169610922139,0,0.179736702294654,0,2.04628948090749,0,0,0,0,0,0,0.260427761085233,0.262379999988587,0,0,0.254253650292766,0.236387681767936,0.689486746482929,1.45802306691627,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0.21787692703798,0,0.153900517007594,0,0,0.0897576444097721,0.54323685961004,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0,0,0,0.476809736941136,0.632994193584081,0.652931232636591,0.42405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| ||
|short_description=p@chr3:42004048..42004069,+ | |short_description=p@chr3:42004048..42004069,+ | ||
}} | }} |
Latest revision as of 20:58, 29 July 2015
Short description: | p@chr3:42004048..42004069, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:42004048..42004069, + |
Coexpression cluster: | C4272_Basophils_Mast_Natural_CD133_CD8_CD19_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.40e-16 | 76 |
bone element | 1.39e-15 | 82 |
skeletal element | 1.15e-14 | 90 |
connective tissue | 1.87e-14 | 371 |
hematopoietic system | 6.79e-13 | 98 |
blood island | 6.79e-13 | 98 |
immune system | 7.36e-13 | 93 |
skeletal system | 2.07e-12 | 100 |
hemolymphoid system | 5.52e-11 | 108 |