FFCP PHASE1:Hg19::chr16:3038260..3038264,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:3038260..3038264,+ | |||
|coexpression_cluster_id=C323 | |coexpression_cluster_id=C323 | ||
|description=CAGE_peak_at_chr16:3038260..3038264,+ | |description=CAGE_peak_at_chr16:3038260..3038264,+ | ||
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|ontology_enrichment_celltype=CL:0000349!2.81e-11!3;CL:0002577!2.81e-11!3;CL:0000062!5.71e-11!11;CL:0000375!5.71e-11!11;CL:0000335!5.71e-11!11;CL:0000035!5.11e-09!20;CL:0000188!8.70e-08!9 | |ontology_enrichment_celltype=CL:0000349!2.81e-11!3;CL:0002577!2.81e-11!3;CL:0000062!5.71e-11!11;CL:0000375!5.71e-11!11;CL:0000335!5.71e-11!11;CL:0000035!5.11e-09!20;CL:0000188!8.70e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002577;6.73e-11;3!CL:0000632;9.90e-11;3!CL:0000327;1.65e-08;15 | |ontology_enrichment_celltype_v019=CL:0002577;6.73e-11;3!CL:0000632;9.90e-11;3!CL:0000327;1.65e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002577,6.73e-11,3;CL:0000632,8.17e-11,3;CL:0000327,1.59e-08,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!2.01e-16!2;UBERON:0001987!1.14e-08!4;UBERON:0004340!1.14e-08!4;UBERON:0000974!2.37e-07!10 | |ontology_enrichment_uberon=UBERON:0000341!2.01e-16!2;UBERON:0001987!1.14e-08!4;UBERON:0004340!1.14e-08!4;UBERON:0000974!2.37e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.33e-15;2!UBERON:0000341;2.05e-15;2!UBERON:0001987;1.70e-08;4!UBERON:0002107;6.57e-07;19!UBERON:0006925;6.57e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0003127;1.33e-15;2!UBERON:0000341;2.05e-15;2!UBERON:0001987;1.70e-08;4!UBERON:0002107;6.57e-07;19!UBERON:0006925;6.57e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.33e-15,2;UBERON:0000341,1.78e-15,2;UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4;UBERON:0002107,6.19e-07,19;UBERON:0006925,6.19e-07,19;UBERON:0008836,6.19e-07,19 | |||
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|short_description=p@chr16:3038260..3038264,+ | |short_description=p@chr16:3038260..3038264,+ | ||
}} | }} |
Latest revision as of 08:08, 25 July 2015
Short description: | p@chr16:3038260..3038264, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3038260..3038264, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 6.73e-11 | 3 |
hepatic stellate cell | 8.17e-11 | 3 |
extracellular matrix secreting cell | 1.59e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.33e-15 | 2 |
throat | 1.78e-15 | 2 |
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |
liver | 6.19e-07 | 19 |
digestive gland | 6.19e-07 | 19 |
liver bud | 6.19e-07 | 19 |