FFCP PHASE1:Hg19::chr11:126237268..126237276,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:126237268..126237276,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr11:126237268..126237276,+ | |description=CAGE_peak_at_chr11:126237268..126237276,+ | ||
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|ontology_enrichment_celltype=CL:0002537!2.21e-07!5;CL:0000066!8.08e-07!254 | |ontology_enrichment_celltype=CL:0002537!2.21e-07!5;CL:0000066!8.08e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.05e-15;5!CL:1000415;1.89e-10;2!CL:0000322;2.88e-07;3 | |ontology_enrichment_celltype_v019=CL:0002537;1.05e-15;5!CL:1000415;1.89e-10;2!CL:0000322;2.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.05e-15,5;CL:1000415,1.89e-10,2;CL:0000322,2.79e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.41e-15!106;DOID:0050687!6.50e-10!143;DOID:5093!6.70e-09!4;DOID:1612!6.70e-09!4 | |ontology_enrichment_disease=DOID:305!1.41e-15!106;DOID:0050687!6.50e-10!143;DOID:5093!6.70e-09!4;DOID:1612!6.70e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:3910;2.85e-10;2 | |ontology_enrichment_disease_v019=DOID:3910;2.85e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,2.72e-10,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000305;1.68e-11;7!UBERON:0002294;2.76e-11;7!UBERON:0001173;2.76e-11;7!UBERON:0003127;2.85e-10;2!UBERON:0000341;2.85e-10;2!UBERON:0004903;2.85e-10;2!UBERON:0002173;2.85e-10;2!UBERON:0002186;2.85e-10;2!UBERON:0001155;5.52e-09;9!UBERON:0005631;2.53e-08;10!UBERON:0000158;2.53e-08;10!UBERON:0000058;4.18e-08;10!UBERON:0000059;1.64e-07;11!UBERON:0002110;2.19e-07;3!UBERON:0004821;2.88e-07;3!UBERON:0007499;2.88e-07;3!UBERON:0003215;2.88e-07;3!UBERON:0010368;2.88e-07;3!UBERON:0009911;2.88e-07;3!UBERON:0002299;2.88e-07;3!UBERON:0006524;2.88e-07;3!UBERON:0008874;2.88e-07;3!UBERON:0002169;2.88e-07;3!UBERON:0004894;2.88e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000305;1.68e-11;7!UBERON:0002294;2.76e-11;7!UBERON:0001173;2.76e-11;7!UBERON:0003127;2.85e-10;2!UBERON:0000341;2.85e-10;2!UBERON:0004903;2.85e-10;2!UBERON:0002173;2.85e-10;2!UBERON:0002186;2.85e-10;2!UBERON:0001155;5.52e-09;9!UBERON:0005631;2.53e-08;10!UBERON:0000158;2.53e-08;10!UBERON:0000058;4.18e-08;10!UBERON:0000059;1.64e-07;11!UBERON:0002110;2.19e-07;3!UBERON:0004821;2.88e-07;3!UBERON:0007499;2.88e-07;3!UBERON:0003215;2.88e-07;3!UBERON:0010368;2.88e-07;3!UBERON:0009911;2.88e-07;3!UBERON:0002299;2.88e-07;3!UBERON:0006524;2.88e-07;3!UBERON:0008874;2.88e-07;3!UBERON:0002169;2.88e-07;3!UBERON:0004894;2.88e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.68e-11,7;UBERON:0000341,2.49e-10,2;UBERON:0004903,2.72e-10,2;UBERON:0002173,2.72e-10,2;UBERON:0002186,2.72e-10,2;UBERON:0003127,2.99e-10,2;UBERON:0004871,3.52e-10,8;UBERON:0001155,4.80e-09,9;UBERON:0002294,6.11e-09,9;UBERON:0001173,6.11e-09,9;UBERON:0004912,6.11e-09,9;UBERON:0000059,1.46e-07,11;UBERON:0002110,2.19e-07,3;UBERON:0006242,2.19e-07,3;UBERON:0004821,2.79e-07,3;UBERON:0003215,2.79e-07,3;UBERON:0010368,2.79e-07,3;UBERON:0009911,2.79e-07,3;UBERON:0002299,2.79e-07,3;UBERON:0006524,2.79e-07,3;UBERON:0008874,2.79e-07,3;UBERON:0002169,2.79e-07,3;UBERON:0004894,2.79e-07,3 | |||
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| ||
|short_description=p@chr11:126237268..126237276,+ | |short_description=p@chr11:126237268..126237276,+ | ||
}} | }} |
Latest revision as of 19:45, 23 July 2015
Short description: | p@chr11:126237268..126237276, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:126237268..126237276, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.05e-15 | 5 |
epithelial cell of gall bladder | 1.89e-10 | 2 |
pneumocyte | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.68e-11 | 7 |
throat | 2.49e-10 | 2 |
bronchoalveolar duct junction | 2.72e-10 | 2 |
alveolar duct | 2.72e-10 | 2 |
bronchiole | 2.72e-10 | 2 |
open tracheal system trachea | 2.99e-10 | 2 |
somatic layer of lateral plate mesoderm | 3.52e-10 | 8 |
colon | 4.80e-09 | 9 |
biliary system | 6.11e-09 | 9 |
biliary tree | 6.11e-09 | 9 |
biliary bud | 6.11e-09 | 9 |
large intestine | 1.46e-07 | 11 |
gallbladder | 2.19e-07 | 3 |
gall bladder primordium | 2.19e-07 | 3 |
pulmonary alveolus epithelium | 2.79e-07 | 3 |
alveolus | 2.79e-07 | 3 |
pulmonary lobule | 2.79e-07 | 3 |
lobule | 2.79e-07 | 3 |
alveolus of lung | 2.79e-07 | 3 |
alveolar system | 2.79e-07 | 3 |
pulmonary acinus | 2.79e-07 | 3 |
alveolar sac | 2.79e-07 | 3 |
alveolar wall | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.72e-10 | 2 |