FFCP PHASE1:Hg19::chr6:110797591..110797602,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85413 | |EntrezGene=85413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20302 | |HGNC=20302 | ||
|TSSclassifier=strong | |||
|UniProt=C9JU94,C9JGT0 | |UniProt=C9JU94,C9JGT0 | ||
|association_with_transcript=0bp_to_ENST00000424139,ENST00000437378_5end | |association_with_transcript=0bp_to_ENST00000424139,ENST00000437378_5end | ||
|cluster_id=chr6:110797591..110797602,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_SLC22A16_5end | |description=CAGE_peak_3_at_SLC22A16_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000763!1.18e-12!112;CL:0000049!1.18e-12!112;CL:0002393!2.05e-10!9;CL:0002397!2.05e-10!9;CL:0000839!2.37e-09!70;CL:0000037!4.62e-09!172;CL:0000566!4.62e-09!172;CL:0002194!7.75e-09!63;CL:0000576!7.75e-09!63;CL:0000040!7.75e-09!63;CL:0000559!7.75e-09!63;CL:0002009!1.65e-08!65;CL:0000988!2.43e-08!182;CL:0000557!1.24e-07!71;CL:0002057!1.66e-07!42;CL:0002032!1.99e-07!165;CL:0000837!1.99e-07!165;CL:0001024!4.06e-07!1;CL:0000766!5.20e-07!76;CL:0000860!6.26e-07!45 | |ontology_enrichment_celltype=CL:0000763!1.18e-12!112;CL:0000049!1.18e-12!112;CL:0002393!2.05e-10!9;CL:0002397!2.05e-10!9;CL:0000839!2.37e-09!70;CL:0000037!4.62e-09!172;CL:0000566!4.62e-09!172;CL:0002194!7.75e-09!63;CL:0000576!7.75e-09!63;CL:0000040!7.75e-09!63;CL:0000559!7.75e-09!63;CL:0002009!1.65e-08!65;CL:0000988!2.43e-08!182;CL:0000557!1.24e-07!71;CL:0002057!1.66e-07!42;CL:0002032!1.99e-07!165;CL:0000837!1.99e-07!165;CL:0001024!4.06e-07!1;CL:0000766!5.20e-07!76;CL:0000860!6.26e-07!45 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | |ontology_enrichment_development_v019=UBERON:0009117;1.89e-12;10!UBERON:0005564;1.89e-12;10 | ||
|ontology_enrichment_disease=DOID:8692!9.11e-14!31;DOID:1240!1.24e-10!39;DOID:2531!1.19e-09!51;DOID:0060083!1.19e-09!51;DOID:0050619!7.29e-07!1;DOID:1357!7.29e-07!1 | |ontology_enrichment_disease=DOID:8692!9.11e-14!31;DOID:1240!1.24e-10!39;DOID:2531!1.19e-09!51;DOID:0060083!1.19e-09!51;DOID:0050619!7.29e-07!1;DOID:1357!7.29e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.53e-08!80;UBERON:0001474!3.27e-07!86;UBERON:0001764!7.29e-07!1;UBERON:0001825!7.29e-07!1;UBERON:0002390!8.05e-07!102;UBERON:0003061!8.05e-07!102 | |ontology_enrichment_uberon=UBERON:0002371!6.53e-08!80;UBERON:0001474!3.27e-07!86;UBERON:0001764!7.29e-07!1;UBERON:0001825!7.29e-07!1;UBERON:0002390!8.05e-07!102;UBERON:0003061!8.05e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11 | |ontology_enrichment_uberon_v019=UBERON:0000473;2.65e-15;8!UBERON:0003135;2.07e-11;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.65e-15,8;UBERON:0003135,2.07e-11,11 | |||
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|short_description=p3@SLC22A16 | |short_description=p3@SLC22A16 | ||
}} | }} |
Latest revision as of 19:39, 19 September 2015
Short description: | p3@SLC22A16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC22A16_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000424139, ENST00000437378_5end |
EntrezGene: | SLC22A16 |
HGNC: | 20302 |
UniProt: | C9JU94C9JGT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 2.65e-15 | 8 |
male reproductive organ | 2.07e-11 | 11 |