FFCP PHASE1:Hg19::chr4:10086061..10086067,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:10086061..10086067,- | |||
|description=CAGE_peak_at_chr4:10086061..10086067,- | |description=CAGE_peak_at_chr4:10086061..10086067,- | ||
|id=chr4:10086061..10086067,- | |id=chr4:10086061..10086067,- | ||
|ontology_enrichment_celltype=CL:0002371!9.23e-11!591;CL:0000012!4.55e-10!682;CL:0000548!5.46e-10!679;CL:0000004!5.46e-10!679;CL:0000255!5.46e-10!679;CL:0000003!4.58e-09!722;CL:0000144!4.87e-09!625;CL:0000222!4.99e-09!119;CL:0000393!7.33e-09!60;CL:0000211!7.33e-09!60;CL:0000680!1.10e-08!57;CL:0000056!1.10e-08!57;CL:0000355!1.10e-08!57;CL:0000187!1.61e-08!54;CL:0000192!2.03e-08!42;CL:0000514!2.03e-08!42;CL:0000055!5.31e-08!180;CL:0000183!1.31e-07!59 | |ontology_enrichment_celltype=CL:0002371!9.23e-11!591;CL:0000012!4.55e-10!682;CL:0000548!5.46e-10!679;CL:0000004!5.46e-10!679;CL:0000255!5.46e-10!679;CL:0000003!4.58e-09!722;CL:0000144!4.87e-09!625;CL:0000222!4.99e-09!119;CL:0000393!7.33e-09!60;CL:0000211!7.33e-09!60;CL:0000680!1.10e-08!57;CL:0000056!1.10e-08!57;CL:0000355!1.10e-08!57;CL:0000187!1.61e-08!54;CL:0000192!2.03e-08!42;CL:0000514!2.03e-08!42;CL:0000055!5.31e-08!180;CL:0000183!1.31e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002596;1.70e-13;2!CL:0002544;2.52e-09;6!CL:0002557;1.48e-07;1!CL:0002601;3.61e-07;1 | |ontology_enrichment_celltype_v019=CL:0002596;1.70e-13;2!CL:0002544;2.52e-09;6!CL:0002557;1.48e-07;1!CL:0002601;3.61e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002596,1.66e-13,2;CL:0002544,3.09e-09,6;CL:0002557,1.54e-07,1;CL:0002601,1.97e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.03e-09!42;UBERON:0003509!1.03e-09!42;UBERON:0004572!1.03e-09!42;UBERON:0004290!2.16e-08!70;UBERON:0001134!3.05e-08!61;UBERON:0002036!3.05e-08!61;UBERON:0003082!3.05e-08!61;UBERON:0000490!4.15e-08!138;UBERON:0000486!8.77e-08!82;UBERON:0002385!1.23e-07!63;UBERON:0001015!1.23e-07!63;UBERON:0000383!1.23e-07!63;UBERON:0001981!2.43e-07!60;UBERON:0007500!2.43e-07!60;UBERON:0004537!2.43e-07!60;UBERON:0006965!2.43e-07!60;UBERON:0002049!6.07e-07!79;UBERON:0007798!6.07e-07!79;UBERON:0004872!6.66e-07!84;UBERON:0004535!7.21e-07!110 | |ontology_enrichment_uberon=UBERON:0001637!1.03e-09!42;UBERON:0003509!1.03e-09!42;UBERON:0004572!1.03e-09!42;UBERON:0004290!2.16e-08!70;UBERON:0001134!3.05e-08!61;UBERON:0002036!3.05e-08!61;UBERON:0003082!3.05e-08!61;UBERON:0000490!4.15e-08!138;UBERON:0000486!8.77e-08!82;UBERON:0002385!1.23e-07!63;UBERON:0001015!1.23e-07!63;UBERON:0000383!1.23e-07!63;UBERON:0001981!2.43e-07!60;UBERON:0007500!2.43e-07!60;UBERON:0004537!2.43e-07!60;UBERON:0006965!2.43e-07!60;UBERON:0002049!6.07e-07!79;UBERON:0007798!6.07e-07!79;UBERON:0004872!6.66e-07!84;UBERON:0004535!7.21e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0005396;1.70e-13;2!UBERON:0004573;3.73e-10;33!UBERON:0004571;3.73e-10;33!UBERON:0001637;6.70e-09;42!UBERON:0003509;6.70e-09;42!UBERON:0004572;6.70e-09;42!UBERON:0007500;9.27e-09;56!UBERON:0001981;9.27e-09;56!UBERON:0004537;9.27e-09;56!UBERON:0007195;3.61e-07;1!UBERON:0000947;9.23e-07;21!UBERON:0010191;9.23e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0005396;1.70e-13;2!UBERON:0004573;3.73e-10;33!UBERON:0004571;3.73e-10;33!UBERON:0001637;6.70e-09;42!UBERON:0003509;6.70e-09;42!UBERON:0004572;6.70e-09;42!UBERON:0007500;9.27e-09;56!UBERON:0001981;9.27e-09;56!UBERON:0004537;9.27e-09;56!UBERON:0007195;3.61e-07;1!UBERON:0000947;9.23e-07;21!UBERON:0010191;9.23e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,1.66e-13,2;UBERON:0001637,2.10e-12,42;UBERON:0003509,2.10e-12,42;UBERON:0004572,2.10e-12,42;UBERON:0004573,2.29e-10,33;UBERON:0004571,2.29e-10,33;UBERON:0007500,3.27e-10,59;UBERON:0001981,3.27e-10,59;UBERON:0004537,3.27e-10,59;UBERON:0006965,3.27e-10,59;UBERON:0004872,1.37e-09,83;UBERON:0007503,9.64e-09,78;UBERON:0000055,1.36e-08,68;UBERON:0003914,2.16e-08,117;UBERON:0004535,6.33e-08,109;UBERON:0001009,1.22e-07,112;UBERON:0000926,1.47e-07,315;UBERON:0004120,1.47e-07,315;UBERON:0006603,1.47e-07,315;UBERON:0003081,1.88e-07,203;UBERON:0002049,3.08e-07,78;UBERON:0007798,3.08e-07,78;UBERON:0000490,4.81e-07,148;UBERON:0007195,5.84e-07,1;UBERON:0000947,8.45e-07,21;UBERON:0010191,8.45e-07,21;UBERON:0002329,9.82e-07,71;UBERON:0003059,9.82e-07,71;UBERON:0007282,9.82e-07,71;UBERON:0004290,9.82e-07,71;UBERON:0009618,9.82e-07,71 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0.689491361473237,0,0,0.188242339542605,0,0.449446968890169,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0.668462741311041,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,1.04535523804977,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0.175669571386252,1.89919659471683,0.364295288292542,0.370784442784429,0,0,0.26591592103773,0.238490624305342,0.571994910780128,0,1.19257444420023,0,1.04142150482278,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0,0.35576626268671,0,0,0.760272105718513,0,1.47065232138347,0,0.0892997282840798,0.22452937262617,0,0,4.74632829784064,0,0,0,0.872188104285069,0,0.759783069987479,0.132409180813219,0.286836620748814,0,0.560677600142307,4.2699598291882,0,0,0,0.326923806226917,0,0,0,0,2.2818872861778,0.149448680551801,0,0,0.280901613404497,0.408308342509787,0.245668634623536,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0.150238058906597,2.1552114800404,0,0.427114777637135,0.423863802319124,0.300091096084402,0.412210116953756,0,0,0.506328996723799,0.292311015483596,0,0,0,0,0.705264687593482,0.339121184620975,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,4.14404764057442,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,1.1240175325762,0.201057944823262,0,0,1.03993478527958,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0.336393253036082,0,0.2933531432838,0,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,2.10833939483032,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0,0.862510299438069,0,0,0,0,0.502548796003046,0,0,0,1.24324654030811,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.695068915744663,0,0,0.413536052245775,0.215714200818617,0,1.21251028578504,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0,0.410635780069046,0.519254429183621,0.232420756919918,0,0,0,0.68888668898764,0.182091168006717,0.131124414959424,0.451199612907412,0,0,0,0,1.13733384070897,0.340187410553031,0,1.54227252690289,0,0,0,0,0.895499018888713,0,0.261435451024901,0.512900250232778,0,0,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0,0.275673144969061,0.107420244868274,0,0.170453254832202,0.267096106940212,0,0,0.127612712494584,0.10115778085555,0,0,1.3940745403212,0.924100740528266,0.532306030317022,1.73986598415015,0.37064843820784,0.143124886741991,0.372158369359667,0.316379424718726,0,0.255897791311334,0,2.22742273548156,3.13979456079692,0.179872457583315,0.823611089208164,0.117812402345686,1.2130948894399,0,0,0.975267478179181,0,0,0.409499734223957,0,0,0.551365343546124,0.66343897524122,0,0,0,0.811641507850816,1.239293992399,0.563391205064483,0.143411352204052,0.0982490410131212,0,1.77380532035299,0.422215270595328,0,0.379473173765715,0.349934720244983,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0,0.213425530045242,0.478278818186467,0,0.383010740264733,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0.511572370226872,0,0,1.11136990144637,0,0,0,0,0,0,0,0.508507300585533,0.472775363535873,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0,0.227884111694002,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0.794682894901893,0.210998064528027,0.652931232636591,0,0.216388639742091,0,0,0,1.48260564340311,1.23563938946503,0.835375596043643,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0.19351266257817,0,0.164230914106418,0,0,0,0,0,0,1.36885967914362,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0.412618309791701,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0.0820925207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| ||
|short_description=p@chr4:10086061..10086067,- | |short_description=p@chr4:10086061..10086067,- | ||
}} | }} |
Latest revision as of 00:21, 30 July 2015
Short description: | p@chr4:10086061..10086067, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:10086061..10086067, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 1.66e-13 | 2 |
aortic endothelial cell | 3.09e-09 | 6 |
fibroblast of pulmonary artery | 1.54e-07 | 1 |
uterine smooth muscle cell | 1.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 1.66e-13 | 2 |
artery | 2.10e-12 | 42 |
arterial blood vessel | 2.10e-12 | 42 |
arterial system | 2.10e-12 | 42 |
systemic artery | 2.29e-10 | 33 |
systemic arterial system | 2.29e-10 | 33 |
epithelial tube open at both ends | 3.27e-10 | 59 |
blood vessel | 3.27e-10 | 59 |
blood vasculature | 3.27e-10 | 59 |
vascular cord | 3.27e-10 | 59 |
splanchnic layer of lateral plate mesoderm | 1.37e-09 | 83 |
epithelial vesicle | 9.64e-09 | 78 |
vessel | 1.36e-08 | 68 |
epithelial tube | 2.16e-08 | 117 |
cardiovascular system | 6.33e-08 | 109 |
circulatory system | 1.22e-07 | 112 |
mesoderm | 1.47e-07 | 315 |
mesoderm-derived structure | 1.47e-07 | 315 |
presumptive mesoderm | 1.47e-07 | 315 |
lateral plate mesoderm | 1.88e-07 | 203 |
vasculature | 3.08e-07 | 78 |
vascular system | 3.08e-07 | 78 |
unilaminar epithelium | 4.81e-07 | 148 |
stroma of bone marrow | 5.84e-07 | 1 |
aorta | 8.45e-07 | 21 |
aortic system | 8.45e-07 | 21 |
somite | 9.82e-07 | 71 |
presomitic mesoderm | 9.82e-07 | 71 |
presumptive segmental plate | 9.82e-07 | 71 |
dermomyotome | 9.82e-07 | 71 |
trunk paraxial mesoderm | 9.82e-07 | 71 |