FFCP PHASE1:Hg19::chr21:17791985..17791990,+: Difference between revisions
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|id=chr21:17791985..17791990,+
|short_description=p42@LINC00478
|description=CAGE_peak_42_at_LINC00478_5end
|association_with_transcript=-8bp_to_ENST00000418813_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=1274 | |HGNC=1274 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000418813_5end | |||
|cluster_id=chr21:17791985..17791990,+ | |||
|description=CAGE_peak_42_at_LINC00478_5end | |||
|id=chr21:17791985..17791990,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;8.69e-18;3!CL:0002569;1.38e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,6.76e-18,3;CL:0002569,1.44e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.10e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.07e-20!115;UBERON:0007100!2.35e-07!27;UBERON:0003103!8.58e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;3.10e-50;1!UBERON:0002081;6.30e-26;2!UBERON:0001723;8.69e-18;3!UBERON:0004151;8.69e-18;3!UBERON:0001033;8.69e-18;3!UBERON:0003422;1.38e-09;6!UBERON:0003104;2.11e-08;7!UBERON:0009142;2.11e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.42e-50,1;UBERON:0002081,5.56e-26,2;UBERON:0010227,5.56e-26,2;UBERON:0004151,8.00e-18,3;UBERON:0001723,1.12e-17,3;UBERON:0001033,1.12e-17,3;UBERON:0010056,1.12e-17,3;UBERON:0003422,1.44e-09,6 | |||
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| ||
|short_description=p42@LINC00478 | |||
}} | }} |
Latest revision as of 19:50, 17 September 2015
Short description: | p42@LINC00478 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_42_at_LINC00478_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000418813_5end |
EntrezGene: | NA |
HGNC: | 1274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 6.76e-18 | 3 |
mesenchymal stem cell of umbilical cord | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.42e-50 | 1 |
cardiac atrium | 5.56e-26 | 2 |
future cardiac atrium | 5.56e-26 | 2 |
cardiac chamber | 8.00e-18 | 3 |
tongue | 1.12e-17 | 3 |
gustatory system | 1.12e-17 | 3 |
future tongue | 1.12e-17 | 3 |
mesenchyme of umbilical cord | 1.44e-09 | 6 |