FFCP PHASE1:Hg19::chr21:27107845..27107859,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:27107845..27107859,-
|short_description=p8@ATP5J
|description=CAGE_peak_8_at_ATP5J_5end
|association_with_transcript=90bp_to_ENST00000400090_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=522 | |EntrezGene=522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=847 | |HGNC=847 | ||
|TSSclassifier=strong | |||
|UniProt=P18859 | |UniProt=P18859 | ||
|association_with_transcript=90bp_to_ENST00000400090_5end | |||
|cluster_id=chr21:27107845..27107859,- | |||
|description=CAGE_peak_8_at_ATP5J_5end | |||
|id=chr21:27107845..27107859,- | |||
|ontology_enrichment_celltype=CL:0002139!6.30e-14!24;CL:0000071!9.78e-11!18;CL:0002546!9.78e-11!18;CL:0000115!1.74e-09!35;CL:0000222!4.80e-09!119;CL:0000213!3.06e-08!57;CL:0000215!3.06e-08!57;CL:0002078!4.24e-07!44;CL:1000413!4.83e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.20e-34;24!CL:0000071;5.29e-28;18!CL:0000115;5.65e-25;36!CL:1000413;8.55e-19;9!CL:0002078;3.35e-16;45!CL:0002544;9.65e-12;6!CL:0000213;8.02e-11;58!CL:0000215;8.02e-11;58!CL:0002144;8.11e-10;3!CL:0002138;4.96e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.91e-35,24;CL:0000115,1.53e-30,36;CL:0000071,7.03e-29,18;CL:0002546,7.03e-29,18;CL:0002078,2.90e-23,45;CL:1000413,3.54e-19,9;CL:0000213,1.30e-18,58;CL:0000215,1.30e-18,58;CL:0000222,3.36e-12,121;CL:0002544,8.75e-12,6;CL:0002144,4.68e-10,3;CL:0005020,3.20e-08,6;CL:0002138,3.20e-08,6;CL:0005022,3.20e-08,6;CL:0000076,6.16e-08,63 | |||
|ontology_enrichment_development_v019=CL:0002546;5.29e-28;18!CL:0005022;4.96e-08;6 | |||
|ontology_enrichment_disease=DOID:2531!1.36e-08!51;DOID:0060083!1.36e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!9.78e-11!18;UBERON:0004638!9.78e-11!18;UBERON:0004852!9.78e-11!18;UBERON:0000055!1.11e-08!69;UBERON:0000487!3.39e-08!22;UBERON:0002049!2.39e-07!79;UBERON:0007798!2.39e-07!79;UBERON:0003915!4.83e-07!9;UBERON:0004700!4.83e-07!9;UBERON:0001917!4.83e-07!9;UBERON:0006914!9.00e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.29e-28;18!UBERON:0001986;5.29e-28;18!UBERON:0004852;5.29e-28;18!UBERON:0000487;2.90e-22;22!UBERON:0006914;3.59e-19;25!UBERON:0003915;8.55e-19;9!UBERON:0004700;8.55e-19;9!UBERON:0001917;8.55e-19;9!UBERON:0000490;7.56e-14;33!UBERON:0000055;1.32e-10;65!UBERON:0010523;8.11e-10;3!UBERON:0001915;8.11e-10;3!UBERON:0001982;8.11e-10;3!UBERON:0001473;6.92e-09;8!UBERON:0004536;6.92e-09;8!UBERON:0006558;6.92e-09;8!UBERON:0007500;2.29e-08;56!UBERON:0001981;2.29e-08;56!UBERON:0004537;2.29e-08;56!UBERON:0002049;1.66e-07;75!UBERON:0007798;1.66e-07;75!UBERON:0002465;4.96e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,7.03e-29,18;UBERON:0001986,7.03e-29,18;UBERON:0004852,7.03e-29,18;UBERON:0000487,5.73e-23,22;UBERON:0006914,8.81e-20,25;UBERON:0003915,3.54e-19,9;UBERON:0004700,3.54e-19,9;UBERON:0001917,3.54e-19,9;UBERON:0000055,2.02e-16,68;UBERON:0004535,1.29e-14,109;UBERON:0001009,5.03e-14,112;UBERON:0002049,1.52e-13,78;UBERON:0007798,1.52e-13,78;UBERON:0007500,3.10e-11,59;UBERON:0001981,3.10e-11,59;UBERON:0004537,3.10e-11,59;UBERON:0006965,3.10e-11,59;UBERON:0010523,4.68e-10,3;UBERON:0001915,4.68e-10,3;UBERON:0001982,4.68e-10,3;UBERON:0001473,3.97e-09,8;UBERON:0004536,3.97e-09,8;UBERON:0006558,3.97e-09,8;UBERON:0004872,9.39e-09,83;UBERON:0003914,6.66e-08,117;UBERON:0002465,3.21e-07,10;UBERON:0001637,5.54e-07,42;UBERON:0003509,5.54e-07,42;UBERON:0004572,5.54e-07,42;UBERON:0003081,6.24e-07,203 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,0,0,0,2.53299878168311,0.631719873426831,0.522371256399677,0.737201809504527,0,0.655324116390517,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0.547497700291537,0,0.61130724598361,1.14940825229924,0.787107813136792,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0.542270404062111,0,1.76160263600908,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0.211255286311942,0.425208599930087,0.209658645508376,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0.294605907474837,0,0,0.25618263945135,0.260118695119756,0,0.829050053357545,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0.821127996921047,0,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0.795285947051099,0,0.283604451492204,0,0.43917392846563,1.44076983047484,0,0,0,0.348259474598534,0.398873881556595,0.238490624305342,0,0,1.78886166630035,1.72046919021225,1.04142150482278,3.39184765154406,1.67799774483962,1.6507082516404,1.25396979922086,0.516833518338658,1.42306505074684,0.66944122552934,4.43112248820062,2.28081631715554,1.95249646038536,1.10298924103761,0.81014194788176,1.60739510911344,0.673588117878509,1.80178368773316,0,0.949265659568129,2.74802615895611,0,0,0,0,0.506522046658319,0,0.286836620748814,0,0,2.1349799145941,0.24666754841716,1.24484414159907,0.134710672069688,0.490385709340376,0.151357427644931,0,0.468642863667593,0,1.1409436430889,0.448346041655403,0.117434498643765,0.647491777472526,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0.910161361938026,1.43723628363248,0.336672227908132,0.750711119231785,0.277064115484183,0,0,0.150238058906597,1.13432183160021,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0.194874010322397,0,0.0920498986422993,0,0,0.302256294682921,0,0.386521706326594,0.818238361772504,0.286804595389004,0.121973706129595,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.482022059766964,0.992645754591546,0,0.474541238222193,0.674156540800822,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0,0.343135620597051,0.439001141634502,0,0.201057944823262,0,0.651616610620649,0,0,0.231860809950154,0.939269553886573,2.02113026865503,2.77791307545966,1.71228737011138,0.790204397959275,0.858486162094873,0,0.936017060556951,0.743155811443641,0.93733833986777,0.503946384596579,0.708875486211932,1.16426079513703,0.581267877027924,0,10.8385912337108,0.792435906119034,0,0,0,0.317489471460845,0.381988425558278,2.34434894420094,0,0,0.600686115687835,0,0.224262168690721,0.43596006883328,0.36669142910475,1.03417372606222,0,0.845302752556,0.26593811658487,0,1.28603687131071,2.83698264046557,0.799266537048298,0,0,0,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.299918973546171,1.2162378064119,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,1.07436577943937,0,0.197030760201927,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0.695068915744663,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0.561320188866147,0.128139149255701,1.02341449813341,0.321707842287215,0,0.616838775210622,0.532685175939381,0.821271560138091,1.03850885836724,0.348631135379878,0.241718899183244,0.601519410909855,0.460404944679482,0.574072240823034,0.546273504020151,0.524497659837696,0,0.231046011313244,0,0,0.527758144464379,1.13733384070897,1.19065593693561,0.863663664408557,4.62681758070868,0.541892875087706,0,0.509752546090077,0,0.223874754722178,0.219259876645935,0,0.256450125116389,0.328014645699706,0.650756789328606,0.103041011647722,0.183138929636687,0,0,1.30012049207304,0,0,0.462145851343933,0.614014698904518,0.275673144969061,0.322260734604821,0.145016693914229,0.255679882248303,0.267096106940212,0.826424576804891,0.960950336825531,0.382838137483752,0.2023155617111,0,0.31481234683064,0,0.308033580176089,1.06461206063404,0.869932992075073,0.55597265731176,0.429374660225974,0,0.316379424718726,0,0.511795582622668,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.353437207037059,0.606547444719948,0,0,0,0.731140468893853,0,0.409499734223957,0.424216295861138,1.13008116620243,0,1.99031692572366,0.876901770507525,1.15755106853338,0,0.608731130888112,0.6196469961995,0,0.286822704408103,0,0,1.06428319221179,0,0,0.379473173765715,0,0,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0,0,1.01489521846434,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0.245040215981032,0.1858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| ||
|short_description=p8@ATP5J | |||
}} | }} |
Latest revision as of 22:28, 17 September 2015
Short description: | p8@ATP5J |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ATP5J_5end |
Coexpression cluster: | NA |
Association with transcript: | 90bp_to_ENST00000400090_5end |
EntrezGene: | ATP5J |
HGNC: | 847 |
UniProt: | P18859 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.91e-35 | 24 |
endothelial cell | 1.53e-30 | 36 |
blood vessel endothelial cell | 7.03e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.03e-29 | 18 |
meso-epithelial cell | 2.90e-23 | 45 |
endothelial cell of artery | 3.54e-19 | 9 |
lining cell | 1.30e-18 | 58 |
barrier cell | 1.30e-18 | 58 |
mesodermal cell | 3.36e-12 | 121 |
aortic endothelial cell | 8.75e-12 | 6 |
capillary endothelial cell | 4.68e-10 | 3 |
lymphangioblast | 3.20e-08 | 6 |
endothelial cell of lymphatic vessel | 3.20e-08 | 6 |
vascular lymphangioblast | 3.20e-08 | 6 |
squamous epithelial cell | 6.16e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 7.03e-29 | 18 |
endothelium | 7.03e-29 | 18 |
cardiovascular system endothelium | 7.03e-29 | 18 |
simple squamous epithelium | 5.73e-23 | 22 |
squamous epithelium | 8.81e-20 | 25 |
endothelial tube | 3.54e-19 | 9 |
arterial system endothelium | 3.54e-19 | 9 |
endothelium of artery | 3.54e-19 | 9 |
vessel | 2.02e-16 | 68 |
cardiovascular system | 1.29e-14 | 109 |
circulatory system | 5.03e-14 | 112 |
vasculature | 1.52e-13 | 78 |
vascular system | 1.52e-13 | 78 |
epithelial tube open at both ends | 3.10e-11 | 59 |
blood vessel | 3.10e-11 | 59 |
blood vasculature | 3.10e-11 | 59 |
vascular cord | 3.10e-11 | 59 |
microcirculatory vessel | 4.68e-10 | 3 |
endothelium of capillary | 4.68e-10 | 3 |
capillary | 4.68e-10 | 3 |
lymphatic vessel | 3.97e-09 | 8 |
lymph vasculature | 3.97e-09 | 8 |
lymphatic part of lymphoid system | 3.97e-09 | 8 |
splanchnic layer of lateral plate mesoderm | 9.39e-09 | 83 |
epithelial tube | 6.66e-08 | 117 |
lymphoid system | 3.21e-07 | 10 |
artery | 5.54e-07 | 42 |
arterial blood vessel | 5.54e-07 | 42 |
arterial system | 5.54e-07 | 42 |
lateral plate mesoderm | 6.24e-07 | 203 |