FFCP PHASE1:Hg19::chr14:45252105..45252117,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_ENST00000556405_5end | |association_with_transcript=-73bp_to_ENST00000556405_5end | ||
|cluster_id=chr14:45252105..45252117,- | |||
|coexpression_cluster_id=C231 | |coexpression_cluster_id=C231 | ||
|description=CAGE_peak_3_at_ENST00000556405_5end | |description=CAGE_peak_3_at_ENST00000556405_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000077!6.99e-22!19;CL:1000306!4.60e-20!4;CL:0002547!4.60e-20!4;CL:0000222!6.22e-12!119;CL:0002594!1.17e-09!4;CL:0000359!2.27e-09!32;CL:0000187!4.08e-07!54;CL:0000192!5.03e-07!42;CL:0000514!5.03e-07!42;CL:0000213!8.50e-07!57;CL:0000215!8.50e-07!57 | |ontology_enrichment_celltype=CL:0000077!6.99e-22!19;CL:1000306!4.60e-20!4;CL:0002547!4.60e-20!4;CL:0000222!6.22e-12!119;CL:0002594!1.17e-09!4;CL:0000359!2.27e-09!32;CL:0000187!4.08e-07!54;CL:0000192!5.03e-07!42;CL:0000514!5.03e-07!42;CL:0000213!8.50e-07!57;CL:0000215!8.50e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.94e-16;19!CL:0002595;7.01e-08;5!CL:0002548;8.97e-07;6 | |ontology_enrichment_celltype_v019=CL:0000077;1.94e-16;19!CL:0002595;7.01e-08;5!CL:0002548;8.97e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.94e-16,19;CL:0002595,7.49e-08,5;CL:0002548,8.48e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.31e-12;3!DOID:127;2.31e-12;3!DOID:0060072;1.32e-09;4 | |ontology_enrichment_disease_v019=DOID:0060084;2.31e-12;3!DOID:127;2.31e-12;3!DOID:0060072;1.32e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.31e-12,3;DOID:127,2.31e-12,3;DOID:0060072,1.32e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0000415!4.60e-20!4;UBERON:0007240!4.60e-20!4;UBERON:0005742!4.60e-20!4;UBERON:0005734!4.60e-20!4;UBERON:0004664!4.60e-20!4;UBERON:0004663!4.60e-20!4;UBERON:0001637!1.85e-15!42;UBERON:0003509!1.85e-15!42;UBERON:0004572!1.85e-15!42;UBERON:0004573!3.57e-12!33;UBERON:0004571!3.57e-12!33;UBERON:0004872!1.02e-10!84;UBERON:0001981!1.94e-10!60;UBERON:0007500!1.94e-10!60;UBERON:0004537!1.94e-10!60;UBERON:0006965!1.94e-10!60;UBERON:0000947!2.99e-10!21;UBERON:0010191!2.99e-10!21;UBERON:0001310!1.17e-09!4;UBERON:0000055!6.55e-09!69;UBERON:0004535!9.08e-08!110;UBERON:0002049!1.28e-07!79;UBERON:0007798!1.28e-07!79;UBERON:0001009!1.62e-07!113;UBERON:0003914!4.02e-07!118;UBERON:0000060!4.84e-07!12 | |ontology_enrichment_uberon=UBERON:0000415!4.60e-20!4;UBERON:0007240!4.60e-20!4;UBERON:0005742!4.60e-20!4;UBERON:0005734!4.60e-20!4;UBERON:0004664!4.60e-20!4;UBERON:0004663!4.60e-20!4;UBERON:0001637!1.85e-15!42;UBERON:0003509!1.85e-15!42;UBERON:0004572!1.85e-15!42;UBERON:0004573!3.57e-12!33;UBERON:0004571!3.57e-12!33;UBERON:0004872!1.02e-10!84;UBERON:0001981!1.94e-10!60;UBERON:0007500!1.94e-10!60;UBERON:0004537!1.94e-10!60;UBERON:0006965!1.94e-10!60;UBERON:0000947!2.99e-10!21;UBERON:0010191!2.99e-10!21;UBERON:0001310!1.17e-09!4;UBERON:0000055!6.55e-09!69;UBERON:0004535!9.08e-08!110;UBERON:0002049!1.28e-07!79;UBERON:0007798!1.28e-07!79;UBERON:0001009!1.62e-07!113;UBERON:0003914!4.02e-07!118;UBERON:0000060!4.84e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;7.01e-08;5!UBERON:0001533;7.01e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0003834;7.01e-08;5!UBERON:0001533;7.01e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,7.49e-08,5;UBERON:0001533,7.49e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0.709336764396714,0,0,1.97334038733728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91871190177462,1.74306691720059,4.59875759437462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65409603063837,0,0,0,0,0.608731130888112,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.761610424337591,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.438568099157414,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0,0.709336764396714,0,0,1.97334038733728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91871190177462,1.74306691720059,4.59875759437462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65409603063837,0,0,0,0,0.608731130888112,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.761610424337591,0.406870733204662,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.438568099157414,0,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@ENST00000556405 | |short_description=p3@ENST00000556405 | ||
}} | }} |
Latest revision as of 20:43, 24 July 2015
Short description: | p3@ENST00000556405 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000556405_5end |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | -73bp_to_ENST00000556405_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.94e-16 | 19 |
smooth muscle cell of the subclavian artery | 7.49e-08 | 5 |
cardiac fibroblast | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 7.49e-08 | 5 |
subclavian artery | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.31e-12 | 3 |
leiomyoma | 2.31e-12 | 3 |
benign neoplasm | 1.32e-09 | 4 |