FFCP PHASE1:Hg19::chr11:134095335..134095361,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23310 | |EntrezGene=23310 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28952 | |HGNC=28952 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJ63,E9PL84 | |UniProt=E9PJ63,E9PL84 | ||
|association_with_transcript=0bp_to_ENST00000532445,ENST00000534227_5end | |association_with_transcript=0bp_to_ENST00000532445,ENST00000534227_5end | ||
|cluster_id=chr11:134095335..134095361,- | |||
|description=CAGE_peak_3_at_NCAPD3_5end | |description=CAGE_peak_3_at_NCAPD3_5end | ||
|id=chr11:134095335..134095361,- | |id=chr11:134095335..134095361,- | ||
|ontology_enrichment_celltype=CL:0000084!7.28e-08!25;CL:0000827!7.28e-08!25;CL:0000037!9.29e-08!172;CL:0000566!9.29e-08!172;CL:0000988!1.46e-07!182 | |ontology_enrichment_celltype=CL:0000084!7.28e-08!25;CL:0000827!7.28e-08!25;CL:0000037!9.29e-08!172;CL:0000566!9.29e-08!172;CL:0000988!1.46e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.44e-08;25 | |ontology_enrichment_celltype_v019=CL:0000084;4.44e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.76e-08,25;CL:0000827,1.76e-08,25;CL:0000037,4.34e-07,168;CL:0000988,4.50e-07,177 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.01e-17!115;UBERON:0001049!3.34e-10!57;UBERON:0005068!3.34e-10!57;UBERON:0006241!3.34e-10!57;UBERON:0007135!3.34e-10!57;UBERON:0003080!4.45e-08!42;UBERON:0001017!4.70e-08!82;UBERON:0002780!1.34e-07!41;UBERON:0001890!1.34e-07!41;UBERON:0006240!1.34e-07!41;UBERON:0002616!4.69e-07!59;UBERON:0000955!8.57e-07!69;UBERON:0006238!8.57e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!2.01e-17!115;UBERON:0001049!3.34e-10!57;UBERON:0005068!3.34e-10!57;UBERON:0006241!3.34e-10!57;UBERON:0007135!3.34e-10!57;UBERON:0003080!4.45e-08!42;UBERON:0001017!4.70e-08!82;UBERON:0002780!1.34e-07!41;UBERON:0001890!1.34e-07!41;UBERON:0006240!1.34e-07!41;UBERON:0002616!4.69e-07!59;UBERON:0000955!8.57e-07!69;UBERON:0006238!8.57e-07!69 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.02e-18,114;UBERON:0001049,1.12e-09,56;UBERON:0005068,1.12e-09,56;UBERON:0006241,1.12e-09,56;UBERON:0007135,1.12e-09,56;UBERON:0000073,7.38e-09,53;UBERON:0002616,7.38e-09,53;UBERON:0001017,3.94e-08,81;UBERON:0002780,1.60e-07,41;UBERON:0001890,1.60e-07,41;UBERON:0003080,1.60e-07,41;UBERON:0006240,1.60e-07,41;UBERON:0001016,3.87e-07,89 | |||
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| ||
|short_description=p3@NCAPD3 | |short_description=p3@NCAPD3 | ||
}} | }} |
Latest revision as of 20:29, 16 September 2015
Short description: | p3@NCAPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NCAPD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000532445, ENST00000534227_5end |
EntrezGene: | NCAPD3 |
HGNC: | 28952 |
UniProt: | E9PJ63E9PL84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.76e-08 | 25 |
pro-T cell | 1.76e-08 | 25 |
hematopoietic stem cell | 4.34e-07 | 168 |
hematopoietic cell | 4.50e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.02e-18 | 114 |
neural tube | 1.12e-09 | 56 |
neural rod | 1.12e-09 | 56 |
future spinal cord | 1.12e-09 | 56 |
neural keel | 1.12e-09 | 56 |
regional part of nervous system | 7.38e-09 | 53 |
regional part of brain | 7.38e-09 | 53 |
central nervous system | 3.94e-08 | 81 |
regional part of forebrain | 1.60e-07 | 41 |
forebrain | 1.60e-07 | 41 |
anterior neural tube | 1.60e-07 | 41 |
future forebrain | 1.60e-07 | 41 |
nervous system | 3.87e-07 | 89 |