FFCP PHASE1:Hg19::chr21:46964256..46964266,-: Difference between revisions
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|id=chr21:46964256..46964266,-
|short_description=p20@SLC19A1
|description=CAGE_peak_20_at_SLC19A1_5end
|association_with_transcript=47bp_to_ENST00000443742_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6573 | |EntrezGene=6573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10937 | |HGNC=10937 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8K6 | |UniProt=C9J8K6 | ||
|association_with_transcript=47bp_to_ENST00000443742_5end | |||
|cluster_id=chr21:46964256..46964266,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_20_at_SLC19A1_5end | |||
|id=chr21:46964256..46964266,- | |||
|ontology_enrichment_celltype=CL:0000039!1.66e-13!7;CL:0000586!1.66e-13!7 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.10e-50;1!UBERON:0004872;2.11e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!6.58e-14!3;UBERON:0005290!6.58e-14!3;UBERON:0010096!6.58e-14!3;UBERON:0001000!1.18e-11!1;UBERON:0005352!1.18e-11!1;UBERON:0007023!3.64e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;3.10e-50;1!UBERON:0005352;3.10e-50;1!UBERON:0006947;8.69e-18;3!UBERON:0004054;8.69e-18;3!UBERON:0001987;1.06e-13;4!UBERON:0005904;1.06e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,6.58e-50,1;UBERON:0005352,6.58e-50,1;UBERON:0006947,1.12e-17,3;UBERON:0004054,1.12e-17,3;UBERON:0001987,8.82e-14,4;UBERON:0004340,8.82e-14,4;UBERON:0005904,1.29e-13,4;UBERON:0004175,5.49e-09,25;UBERON:0003124,1.89e-08,7 | |||
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|short_description=p20@SLC19A1 | |||
}} | }} |
Latest revision as of 21:19, 18 September 2015
Short description: | p20@SLC19A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_SLC19A1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 47bp_to_ENST00000443742_5end |
EntrezGene: | SLC19A1 |
HGNC: | 10937 |
UniProt: | C9J8K6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vas deferens | 6.58e-50 | 1 |
spermatic cord | 6.58e-50 | 1 |
male genital duct | 1.12e-17 | 3 |
internal male genitalia | 1.12e-17 | 3 |
placenta | 8.82e-14 | 4 |
allantois | 8.82e-14 | 4 |
duct of male reproductive system | 1.29e-13 | 4 |
internal genitalia | 5.49e-09 | 25 |
chorion | 1.89e-08 | 7 |