FFCP PHASE1:Hg19::chr21:47418307..47418324,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47418307..47418324,+ | |||
|coexpression_cluster_id=C198 | |coexpression_cluster_id=C198 | ||
|description=CAGE_peak_at_chr21:47418307..47418324,+ | |description=CAGE_peak_at_chr21:47418307..47418324,+ | ||
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|ontology_enrichment_celltype_v019=CL:0000499;1.63e-11;28!CL:0002559;5.06e-11;5!CL:0002552;1.53e-09;5!CL:0002570;1.97e-09;8!CL:0000134;1.20e-08;55!CL:0000057;2.41e-08;73!CL:0000135;4.21e-08;3!CL:0000388;4.21e-08;3!CL:0000723;7.37e-08;61!CL:0000048;8.98e-08;58!CL:0002320;2.22e-07;188!CL:0000346;2.30e-07;3!CL:1000428;2.30e-07;3!CL:0000327;2.68e-07;15!CL:0002521;2.88e-07;3 | |ontology_enrichment_celltype_v019=CL:0000499;1.63e-11;28!CL:0002559;5.06e-11;5!CL:0002552;1.53e-09;5!CL:0002570;1.97e-09;8!CL:0000134;1.20e-08;55!CL:0000057;2.41e-08;73!CL:0000135;4.21e-08;3!CL:0000388;4.21e-08;3!CL:0000723;7.37e-08;61!CL:0000048;8.98e-08;58!CL:0002320;2.22e-07;188!CL:0000346;2.30e-07;3!CL:1000428;2.30e-07;3!CL:0000327;2.68e-07;15!CL:0002521;2.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.58e-19,76;CL:0000048,4.36e-18,427;CL:0000723,1.56e-17,433;CL:0000034,8.13e-17,441;CL:0002320,2.31e-15,361;CL:0000134,7.68e-12,354;CL:0000499,1.90e-11,28;CL:0002559,3.18e-11,5;CL:0000219,2.23e-10,386;CL:0002570,2.46e-09,8;CL:0002552,3.20e-09,5;CL:0000135,4.20e-08,3;CL:0000388,4.20e-08,3;CL:0002521,1.33e-07,3;CL:0000346,1.51e-07,3;CL:1000428,1.51e-07,3;CL:0000327,3.12e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!4.15e-08!14 | |ontology_enrichment_disease=DOID:2394!4.15e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:17,9.78e-07,5;DOID:450,9.78e-07,5;DOID:66,9.78e-07,5;DOID:423,9.78e-07,5;DOID:0080000,9.78e-07,5;DOID:11722,9.78e-07,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001013;5.23e-14;14!UBERON:0002072;3.43e-11;5!UBERON:0002073;5.06e-11;5!UBERON:0004905;8.87e-09;8!UBERON:0000982;8.87e-09;8!UBERON:0004770;8.87e-09;8!UBERON:0002199;2.63e-08;46!UBERON:0002416;2.63e-08;46!UBERON:0007846;4.21e-08;3!UBERON:0000043;4.21e-08;3!UBERON:0007845;4.21e-08;3!UBERON:0003102;1.80e-07;50!UBERON:0000412;2.30e-07;3!UBERON:0001992;2.30e-07;3!UBERON:0002190;2.88e-07;3!UBERON:0002384;3.57e-07;198!UBERON:0011135;4.75e-07;5!UBERON:0002216;4.75e-07;5!UBERON:0011134;4.75e-07;5!UBERON:0002209;4.75e-07;5!UBERON:0002213;4.75e-07;5!UBERON:0007844;4.75e-07;5!UBERON:0011138;4.75e-07;5!UBERON:0001130;4.75e-07;5!UBERON:0001066;4.75e-07;5!UBERON:0001468;4.75e-07;5!UBERON:0002204;7.98e-07;70 | |ontology_enrichment_uberon_v019=UBERON:0001013;5.23e-14;14!UBERON:0002072;3.43e-11;5!UBERON:0002073;5.06e-11;5!UBERON:0004905;8.87e-09;8!UBERON:0000982;8.87e-09;8!UBERON:0004770;8.87e-09;8!UBERON:0002199;2.63e-08;46!UBERON:0002416;2.63e-08;46!UBERON:0007846;4.21e-08;3!UBERON:0000043;4.21e-08;3!UBERON:0007845;4.21e-08;3!UBERON:0003102;1.80e-07;50!UBERON:0000412;2.30e-07;3!UBERON:0001992;2.30e-07;3!UBERON:0002190;2.88e-07;3!UBERON:0002384;3.57e-07;198!UBERON:0011135;4.75e-07;5!UBERON:0002216;4.75e-07;5!UBERON:0011134;4.75e-07;5!UBERON:0002209;4.75e-07;5!UBERON:0002213;4.75e-07;5!UBERON:0007844;4.75e-07;5!UBERON:0011138;4.75e-07;5!UBERON:0001130;4.75e-07;5!UBERON:0001066;4.75e-07;5!UBERON:0001468;4.75e-07;5!UBERON:0002204;7.98e-07;70 | ||
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| ||
|short_description=p@chr21:47418307..47418324,+ | |short_description=p@chr21:47418307..47418324,+ | ||
}} | }} |
Latest revision as of 18:43, 28 July 2015
Short description: | p@chr21:47418307..47418324, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47418307..47418324, + |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.58e-19 | 76 |
multi fate stem cell | 4.36e-18 | 427 |
somatic stem cell | 1.56e-17 | 433 |
stem cell | 8.13e-17 | 441 |
connective tissue cell | 2.31e-15 | 361 |
mesenchymal cell | 7.68e-12 | 354 |
stromal cell | 1.90e-11 | 28 |
hair follicle cell | 3.18e-11 | 5 |
motile cell | 2.23e-10 | 386 |
mesenchymal stem cell of adipose | 2.46e-09 | 8 |
fibroblast of gingiva | 3.20e-09 | 5 |
fibrocyte | 4.20e-08 | 3 |
tendon cell | 4.20e-08 | 3 |
subcutaneous fat cell | 1.33e-07 | 3 |
hair follicle dermal papilla cell | 1.51e-07 | 3 |
stem cell of epidermis | 1.51e-07 | 3 |
extracellular matrix secreting cell | 3.12e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.78e-07 | 5 |
myotonic disease | 9.78e-07 | 5 |
muscle tissue disease | 9.78e-07 | 5 |
myopathy | 9.78e-07 | 5 |
muscular disease | 9.78e-07 | 5 |
myotonic dystrophy | 9.78e-07 | 5 |