FFCP PHASE1:Hg19::chr14:75079282..75079293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4053 | |EntrezGene=4053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |HGNC=6715 | ||
|TSSclassifier=strong | |||
|UniProt=G3V254 | |UniProt=G3V254 | ||
|association_with_transcript=12bp_to_ENST00000556359_5end | |association_with_transcript=12bp_to_ENST00000556359_5end | ||
|cluster_id=chr14:75079282..75079293,- | |||
|coexpression_cluster_id=C758 | |coexpression_cluster_id=C758 | ||
|description=CAGE_peak_21_at_LTBP2_5end | |description=CAGE_peak_21_at_LTBP2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!9.46e-16!180;CL:0002371!2.21e-14!591;CL:0000057!4.23e-14!75;CL:0000222!2.68e-13!119;CL:0000144!1.09e-12!625;CL:0000115!1.56e-11!35;CL:0002078!2.76e-11!44;CL:0002139!4.07e-11!24;CL:0000220!5.46e-11!246;CL:0000548!7.39e-11!679;CL:0000004!7.39e-11!679;CL:0000255!7.39e-11!679;CL:0002321!1.25e-10!248;CL:0000012!1.90e-10!682;CL:0000071!2.33e-10!18;CL:0002546!2.33e-10!18;CL:0002334!2.10e-08!12;CL:1000413!3.05e-08!9;CL:0000183!1.30e-07!59;CL:0000213!1.55e-07!57;CL:0000215!1.55e-07!57 | |ontology_enrichment_celltype=CL:0000055!9.46e-16!180;CL:0002371!2.21e-14!591;CL:0000057!4.23e-14!75;CL:0000222!2.68e-13!119;CL:0000144!1.09e-12!625;CL:0000115!1.56e-11!35;CL:0002078!2.76e-11!44;CL:0002139!4.07e-11!24;CL:0000220!5.46e-11!246;CL:0000548!7.39e-11!679;CL:0000004!7.39e-11!679;CL:0000255!7.39e-11!679;CL:0002321!1.25e-10!248;CL:0000012!1.90e-10!682;CL:0000071!2.33e-10!18;CL:0002546!2.33e-10!18;CL:0002334!2.10e-08!12;CL:1000413!3.05e-08!9;CL:0000183!1.30e-07!59;CL:0000213!1.55e-07!57;CL:0000215!1.55e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002139;9.29e-19;24!CL:0000071;8.38e-17;18!CL:0000115;1.16e-16;36!CL:1000413;5.38e-14;9!CL:0000244;1.32e-09;4!CL:0000731;1.32e-09;4!CL:0002334;3.64e-09;12!CL:0002544;5.13e-09;6!CL:0002543;1.54e-08;6!CL:0002078;7.12e-08;45!CL:0000213;8.23e-08;58!CL:0000215;8.23e-08;58 | |ontology_enrichment_celltype_v019=CL:0002139;9.29e-19;24!CL:0000071;8.38e-17;18!CL:0000115;1.16e-16;36!CL:1000413;5.38e-14;9!CL:0000244;1.32e-09;4!CL:0000731;1.32e-09;4!CL:0002334;3.64e-09;12!CL:0002544;5.13e-09;6!CL:0002543;1.54e-08;6!CL:0002078;7.12e-08;45!CL:0000213;8.23e-08;58!CL:0000215;8.23e-08;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.52e-19,24;CL:0000115,1.83e-18,36;CL:0000071,3.27e-17,18;CL:0002546,3.27e-17,18;CL:1000413,1.75e-14,9;CL:0002078,1.28e-13,45;CL:0000222,1.30e-13,121;CL:0000213,1.37e-10,58;CL:0000215,1.37e-10,58;CL:0000244,7.96e-10,4;CL:0000731,7.96e-10,4;CL:0002544,3.71e-09,6;CL:0002334,6.15e-09,12;CL:0002543,1.44e-08,6;CL:0002321,6.40e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;8.38e-17;18 | |ontology_enrichment_development_v019=CL:0002546;8.38e-17;18 | ||
|ontology_enrichment_disease=DOID:2394!4.18e-09!14 | |ontology_enrichment_disease=DOID:2394!4.18e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.00e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;3.00e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.74e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.10e-20!79;UBERON:0007798!1.10e-20!79;UBERON:0000055!3.60e-19!69;UBERON:0001981!8.27e-19!60;UBERON:0007500!8.27e-19!60;UBERON:0004537!8.27e-19!60;UBERON:0006965!8.27e-19!60;UBERON:0003914!2.58e-17!118;UBERON:0004872!3.00e-16!84;UBERON:0001009!3.60e-16!113;UBERON:0004535!4.14e-16!110;UBERON:0001637!3.55e-15!42;UBERON:0003509!3.55e-15!42;UBERON:0004572!3.55e-15!42;UBERON:0001986!2.33e-10!18;UBERON:0004638!2.33e-10!18;UBERON:0004852!2.33e-10!18;UBERON:0004573!5.34e-10!33;UBERON:0004571!5.34e-10!33;UBERON:0005256!2.60e-09!143;UBERON:0000119!5.70e-09!312;UBERON:0000483!1.01e-08!309;UBERON:0000490!1.60e-08!138;UBERON:0000468!2.90e-08!659;UBERON:0003915!3.05e-08!9;UBERON:0004700!3.05e-08!9;UBERON:0001917!3.05e-08!9;UBERON:0000487!4.69e-08!22;UBERON:0000914!5.32e-08!83;UBERON:0002329!5.32e-08!83;UBERON:0003077!5.32e-08!83;UBERON:0003059!5.32e-08!83;UBERON:0007282!5.32e-08!83;UBERON:0009618!5.32e-08!83;UBERON:0007285!5.32e-08!83;UBERON:0000477!5.77e-08!286;UBERON:0000467!5.84e-08!625;UBERON:0006914!6.61e-08!25;UBERON:0000480!7.63e-08!626;UBERON:0002100!1.60e-07!216;UBERON:0000947!1.62e-07!21;UBERON:0010191!1.62e-07!21;UBERON:0000486!1.71e-07!82;UBERON:0003102!1.99e-07!95;UBERON:0004111!2.47e-07!241;UBERON:0000475!4.02e-07!365 | |ontology_enrichment_uberon=UBERON:0002049!1.10e-20!79;UBERON:0007798!1.10e-20!79;UBERON:0000055!3.60e-19!69;UBERON:0001981!8.27e-19!60;UBERON:0007500!8.27e-19!60;UBERON:0004537!8.27e-19!60;UBERON:0006965!8.27e-19!60;UBERON:0003914!2.58e-17!118;UBERON:0004872!3.00e-16!84;UBERON:0001009!3.60e-16!113;UBERON:0004535!4.14e-16!110;UBERON:0001637!3.55e-15!42;UBERON:0003509!3.55e-15!42;UBERON:0004572!3.55e-15!42;UBERON:0001986!2.33e-10!18;UBERON:0004638!2.33e-10!18;UBERON:0004852!2.33e-10!18;UBERON:0004573!5.34e-10!33;UBERON:0004571!5.34e-10!33;UBERON:0005256!2.60e-09!143;UBERON:0000119!5.70e-09!312;UBERON:0000483!1.01e-08!309;UBERON:0000490!1.60e-08!138;UBERON:0000468!2.90e-08!659;UBERON:0003915!3.05e-08!9;UBERON:0004700!3.05e-08!9;UBERON:0001917!3.05e-08!9;UBERON:0000487!4.69e-08!22;UBERON:0000914!5.32e-08!83;UBERON:0002329!5.32e-08!83;UBERON:0003077!5.32e-08!83;UBERON:0003059!5.32e-08!83;UBERON:0007282!5.32e-08!83;UBERON:0009618!5.32e-08!83;UBERON:0007285!5.32e-08!83;UBERON:0000477!5.77e-08!286;UBERON:0000467!5.84e-08!625;UBERON:0006914!6.61e-08!25;UBERON:0000480!7.63e-08!626;UBERON:0002100!1.60e-07!216;UBERON:0000947!1.62e-07!21;UBERON:0010191!1.62e-07!21;UBERON:0000486!1.71e-07!82;UBERON:0003102!1.99e-07!95;UBERON:0004111!2.47e-07!241;UBERON:0000475!4.02e-07!365 | ||
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| ||
|short_description=p21@LTBP2 | |short_description=p21@LTBP2 | ||
}} | }} |
Latest revision as of 01:27, 16 September 2015
Short description: | p21@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 12bp_to_ENST00000556359_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | G3V254 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.52e-19 | 24 |
endothelial cell | 1.83e-18 | 36 |
blood vessel endothelial cell | 3.27e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.27e-17 | 18 |
endothelial cell of artery | 1.75e-14 | 9 |
meso-epithelial cell | 1.28e-13 | 45 |
mesodermal cell | 1.30e-13 | 121 |
lining cell | 1.37e-10 | 58 |
barrier cell | 1.37e-10 | 58 |
transitional epithelial cell | 7.96e-10 | 4 |
urothelial cell | 7.96e-10 | 4 |
aortic endothelial cell | 3.71e-09 | 6 |
preadipocyte | 6.15e-09 | 12 |
vein endothelial cell | 1.44e-08 | 6 |
embryonic cell | 6.40e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
vasculature | 7.00e-21 | 78 |
vascular system | 7.00e-21 | 78 |
vessel | 1.91e-20 | 68 |
epithelial tube open at both ends | 2.15e-19 | 59 |
blood vessel | 2.15e-19 | 59 |
blood vasculature | 2.15e-19 | 59 |
vascular cord | 2.15e-19 | 59 |
blood vessel endothelium | 3.27e-17 | 18 |
endothelium | 3.27e-17 | 18 |
cardiovascular system endothelium | 3.27e-17 | 18 |
artery | 7.30e-16 | 42 |
arterial blood vessel | 7.30e-16 | 42 |
arterial system | 7.30e-16 | 42 |
cardiovascular system | 1.80e-15 | 109 |
splanchnic layer of lateral plate mesoderm | 4.35e-15 | 83 |
circulatory system | 8.76e-15 | 112 |
endothelial tube | 1.75e-14 | 9 |
arterial system endothelium | 1.75e-14 | 9 |
endothelium of artery | 1.75e-14 | 9 |
simple squamous epithelium | 1.89e-13 | 22 |
epithelial tube | 1.15e-12 | 117 |
squamous epithelium | 1.98e-11 | 25 |
systemic artery | 1.04e-08 | 33 |
systemic arterial system | 1.04e-08 | 33 |
urothelium | 8.08e-08 | 5 |
umbilical blood vessel | 1.01e-07 | 9 |
unilaminar epithelium | 2.55e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.74e-08 | 14 |