FFCP PHASE1:Hg19::chr10:82049381..82049384,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4143 | |EntrezGene=4143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6903 | |HGNC=6903 | ||
|TSSclassifier=strong | |||
|UniProt=Q00266 | |UniProt=Q00266 | ||
|association_with_transcript=49bp_to_NM_000429,uc001kbw.2_5end | |association_with_transcript=49bp_to_NM_000429,uc001kbw.2_5end | ||
|cluster_id=chr10:82049381..82049384,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_9_at_MAT1A_5end | |description=CAGE_peak_9_at_MAT1A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!5.25e-20!12;CL:0000417!5.25e-20!12;CL:0000668!5.25e-20!12;CL:0000414!5.25e-20!12;CL:0000412!5.25e-20!12;CL:0000182!5.25e-20!12;CL:0000167!7.97e-08!1;CL:0000164!7.97e-08!1;CL:0000502!7.97e-08!1;CL:0000172!7.97e-08!1;CL:0000173!7.97e-08!1;CL:0002351!7.97e-08!1 | |ontology_enrichment_celltype=CL:0000181!5.25e-20!12;CL:0000417!5.25e-20!12;CL:0000668!5.25e-20!12;CL:0000414!5.25e-20!12;CL:0000412!5.25e-20!12;CL:0000182!5.25e-20!12;CL:0000167!7.97e-08!1;CL:0000164!7.97e-08!1;CL:0000502!7.97e-08!1;CL:0000172!7.97e-08!1;CL:0000173!7.97e-08!1;CL:0002351!7.97e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.23e-65;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.23e-65;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.04e-65,12;CL:0000223,9.92e-14,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.33e-49;11!UBERON:0009497;4.79e-42;13!UBERON:0001041;1.99e-18;30!UBERON:0003104;8.54e-18;31!CL:0000223;3.53e-10;58 | |ontology_enrichment_development_v019=UBERON:0004161;1.33e-49;11!UBERON:0009497;4.79e-42;13!UBERON:0001041;1.99e-18;30!UBERON:0003104;8.54e-18;31!CL:0000223;3.53e-10;58 | ||
|ontology_enrichment_disease=DOID:7!1.52e-09!39;DOID:2355!6.97e-08!1;DOID:4430!7.97e-08!1;DOID:178!1.04e-07!1;DOID:326!1.04e-07!1;DOID:3978!1.04e-07!1;DOID:3394!1.04e-07!1;DOID:5844!1.04e-07!1;DOID:3112!1.26e-07!1;DOID:1287!2.20e-07!4 | |ontology_enrichment_disease=DOID:7!1.52e-09!39;DOID:2355!6.97e-08!1;DOID:4430!7.97e-08!1;DOID:178!1.04e-07!1;DOID:326!1.04e-07!1;DOID:3978!1.04e-07!1;DOID:3394!1.04e-07!1;DOID:5844!1.04e-07!1;DOID:3112!1.26e-07!1;DOID:1287!2.20e-07!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.99e-22!19;UBERON:0006925!7.99e-22!19;UBERON:0008836!7.99e-22!19;UBERON:0002368!5.45e-21!35;UBERON:0008835!1.09e-18!22;UBERON:0003894!1.09e-18!22;UBERON:0009854!8.00e-18!23;UBERON:0007499!2.65e-16!25;UBERON:0009497!2.65e-16!25;UBERON:0000015!2.65e-16!25;UBERON:0002423!2.65e-16!25;UBERON:0006235!2.65e-16!25;UBERON:0004161!2.65e-16!25;UBERON:0000949!7.10e-16!45;UBERON:0005057!1.25e-15!26;UBERON:0009856!1.25e-15!26;UBERON:0002365!6.47e-13!31;UBERON:0002330!6.47e-13!31;UBERON:0005172!1.26e-12!55;UBERON:0005173!1.26e-12!55;UBERON:0002530!1.26e-11!59;UBERON:0002417!3.48e-11!61;UBERON:0000916!3.48e-11!61;UBERON:0003929!1.23e-10!54;UBERON:0006947!8.52e-10!3;UBERON:0004054!8.52e-10!3;UBERON:0001301!5.33e-08!1;UBERON:0001000!6.10e-08!1;UBERON:0005352!6.10e-08!1;UBERON:0005911!8.63e-08!82;UBERON:0005904!1.49e-07!4 | |ontology_enrichment_uberon=UBERON:0002107!7.99e-22!19;UBERON:0006925!7.99e-22!19;UBERON:0008836!7.99e-22!19;UBERON:0002368!5.45e-21!35;UBERON:0008835!1.09e-18!22;UBERON:0003894!1.09e-18!22;UBERON:0009854!8.00e-18!23;UBERON:0007499!2.65e-16!25;UBERON:0009497!2.65e-16!25;UBERON:0000015!2.65e-16!25;UBERON:0002423!2.65e-16!25;UBERON:0006235!2.65e-16!25;UBERON:0004161!2.65e-16!25;UBERON:0000949!7.10e-16!45;UBERON:0005057!1.25e-15!26;UBERON:0009856!1.25e-15!26;UBERON:0002365!6.47e-13!31;UBERON:0002330!6.47e-13!31;UBERON:0005172!1.26e-12!55;UBERON:0005173!1.26e-12!55;UBERON:0002530!1.26e-11!59;UBERON:0002417!3.48e-11!61;UBERON:0000916!3.48e-11!61;UBERON:0003929!1.23e-10!54;UBERON:0006947!8.52e-10!3;UBERON:0004054!8.52e-10!3;UBERON:0001301!5.33e-08!1;UBERON:0001000!6.10e-08!1;UBERON:0005352!6.10e-08!1;UBERON:0005911!8.63e-08!82;UBERON:0005904!1.49e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.10e-73;19!UBERON:0006925;2.10e-73;19!UBERON:0002423;7.87e-56;25!UBERON:0002365;2.61e-43;31!UBERON:0002330;2.61e-43;31!UBERON:0002368;3.23e-38;33!UBERON:0000949;6.97e-28;43!UBERON:0005172;1.33e-16;52!UBERON:0005173;1.33e-16;52!UBERON:0002417;1.50e-14;58!UBERON:0000916;1.50e-14;58!UBERON:0002530;2.16e-14;57!UBERON:0001007;4.12e-10;81 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.10e-73;19!UBERON:0006925;2.10e-73;19!UBERON:0002423;7.87e-56;25!UBERON:0002365;2.61e-43;31!UBERON:0002330;2.61e-43;31!UBERON:0002368;3.23e-38;33!UBERON:0000949;6.97e-28;43!UBERON:0005172;1.33e-16;52!UBERON:0005173;1.33e-16;52!UBERON:0002417;1.50e-14;58!UBERON:0000916;1.50e-14;58!UBERON:0002530;2.16e-14;57!UBERON:0001007;4.12e-10;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.74e-73,19;UBERON:0006925,1.74e-73,19;UBERON:0008836,1.74e-73,19;UBERON:0008835,1.72e-63,22;UBERON:0003894,1.72e-63,22;UBERON:0009854,9.72e-61,23;UBERON:0007499,6.82e-56,25;UBERON:0009497,6.82e-56,25;UBERON:0000015,6.82e-56,25;UBERON:0002423,6.82e-56,25;UBERON:0006235,6.82e-56,25;UBERON:0004161,6.82e-56,25;UBERON:0009856,9.50e-54,26;UBERON:0002365,4.24e-45,31;UBERON:0002330,4.24e-45,31;UBERON:0002368,5.90e-40,35;UBERON:0000949,4.36e-31,45;UBERON:0003929,6.64e-26,54;UBERON:0005172,6.64e-26,54;UBERON:0005173,6.64e-26,54;UBERON:0002530,1.05e-23,59;UBERON:0002417,2.61e-23,60;UBERON:0000916,2.61e-23,60;UBERON:0005911,4.96e-17,82;UBERON:0001041,4.81e-16,87;UBERON:0005177,8.49e-14,101;UBERON:0009569,2.01e-12,112;UBERON:0003914,6.98e-12,117;UBERON:0004921,1.12e-11,118;UBERON:0005256,2.19e-11,122;UBERON:0001007,1.80e-09,145;UBERON:0001555,1.80e-09,145;UBERON:0007026,1.80e-09,145;UBERON:0000490,2.44e-09,148;UBERON:0001048,1.29e-08,160;UBERON:0003104,1.29e-08,160;UBERON:0009142,1.29e-08,160;UBERON:0004119,1.47e-08,160;UBERON:0000925,1.47e-08,160;UBERON:0006595,1.47e-08,160;UBERON:0000025,4.39e-07,192;UBERON:0002100,7.38e-07,199 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,2.94848165003288,5.90789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,1.3393140992228,1.81314888438566,1.3480708770837,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,2.94848165003288,5.90789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0,0,0.18714054040822,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,1.3393140992228,1.81314888438566,1.3480708770837,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@MAT1A | |short_description=p9@MAT1A | ||
}} | }} |
Latest revision as of 15:09, 19 September 2015
Short description: | p9@MAT1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MAT1A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 49bp_to_NM_000429, uc001kbw.2_5end |
EntrezGene: | MAT1A |
HGNC: | 6903 |
UniProt: | Q00266 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.04e-65 | 12 |
endodermal cell | 9.92e-14 | 58 |