FFCP PHASE1:Hg19::chr10:89577732..89577739,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84896 | |EntrezGene=84896 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25903 | |HGNC=25903 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBU5 | |UniProt=Q8NBU5 | ||
|association_with_transcript=177bp_to_ENST00000308448,ENST00000541004,NM_032810,uc001kez.1_5end | |association_with_transcript=177bp_to_ENST00000308448,ENST00000541004,NM_032810,uc001kez.1_5end | ||
|cluster_id=chr10:89577732..89577739,- | |||
|coexpression_cluster_id=C205 | |coexpression_cluster_id=C205 | ||
|description=CAGE_peak_13_at_ATAD1_5end | |description=CAGE_peak_13_at_ATAD1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!2.85e-10!3;CL:0000861!2.85e-10!3 | |ontology_enrichment_celltype=CL:0002150!2.85e-10!3;CL:0000861!2.85e-10!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;8.64e-30;1!DOID:0060061;8.64e-30;1!DOID:8691;8.64e-30;1 | |ontology_enrichment_disease_v019=DOID:0060060;8.64e-30;1!DOID:0060061;8.64e-30;1!DOID:8691;8.64e-30;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.48e-30,1;DOID:0060061,7.48e-30,1;DOID:8691,7.48e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.50e-08!9 | |ontology_enrichment_uberon=UBERON:0001737!3.50e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.46e-26;10!UBERON:0000178;1.13e-17;15!UBERON:0000179;1.13e-17;15!UBERON:0000463;1.13e-17;15!UBERON:0000478;2.48e-11;24!UBERON:0002390;9.36e-09;32 | |ontology_enrichment_uberon_v019=UBERON:0002331;4.46e-26;10!UBERON:0000178;1.13e-17;15!UBERON:0000179;1.13e-17;15!UBERON:0000463;1.13e-17;15!UBERON:0000478;2.48e-11;24!UBERON:0002390;9.36e-09;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.92e-26,10;UBERON:0000358,3.92e-26,10;UBERON:0000307,3.92e-26,10;UBERON:0000091,3.92e-26,10;UBERON:0000087,3.92e-26,10;UBERON:0007010,3.92e-26,10;UBERON:0007806,3.92e-26,10;UBERON:0008780,3.92e-26,10;UBERON:0005728,3.92e-26,10;UBERON:0000178,1.04e-17,15;UBERON:0000179,1.04e-17,15;UBERON:0000463,1.04e-17,15;UBERON:0000478,2.35e-11,24 | |||
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| ||
|short_description=p13@ATAD1 | |short_description=p13@ATAD1 | ||
}} | }} |
Latest revision as of 18:53, 19 September 2015
Short description: | p13@ATAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ATAD1_5end |
Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
Association with transcript: | 177bp_to_ENST00000308448, ENST00000541004, NM_032810, uc001kez.1_5end |
EntrezGene: | ATAD1 |
HGNC: | 25903 |
UniProt: | Q8NBU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.92e-26 | 10 |
blastocyst | 3.92e-26 | 10 |
blastula | 3.92e-26 | 10 |
bilaminar disc | 3.92e-26 | 10 |
inner cell mass | 3.92e-26 | 10 |
cleaving embryo | 3.92e-26 | 10 |
connecting stalk | 3.92e-26 | 10 |
inner cell mass derived epiblast | 3.92e-26 | 10 |
extraembryonic mesoderm | 3.92e-26 | 10 |
blood | 1.04e-17 | 15 |
haemolymphatic fluid | 1.04e-17 | 15 |
organism substance | 1.04e-17 | 15 |
extraembryonic structure | 2.35e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.48e-30 | 1 |
cutaneous T cell lymphoma | 7.48e-30 | 1 |
mycosis fungoides | 7.48e-30 | 1 |