FFCP PHASE1:Hg19::chr5:72743793..72743855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=2297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3802 | |HGNC=3802 | ||
|UniProt= | |TSSclassifier=strong | ||
|UniProt=NA | |||
|association_with_transcript=289bp_to_ENST00000499003_5end | |association_with_transcript=289bp_to_ENST00000499003_5end | ||
|cluster_id=chr5:72743793..72743855,- | |||
|coexpression_cluster_id=C2827 | |coexpression_cluster_id=C2827 | ||
|description=CAGE_peak_4_at_FOXD1_5end | |description=CAGE_peak_4_at_FOXD1_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.68e-32!180;CL:0000057!1.70e-21!75;CL:0000548!1.74e-12!679;CL:0000004!1.74e-12!679;CL:0000255!1.74e-12!679;CL:0000012!7.07e-12!682;CL:0000183!1.15e-11!59;CL:0002620!1.52e-11!23;CL:0000359!5.84e-11!32;CL:0000192!3.24e-10!42;CL:0000514!3.24e-10!42;CL:0000680!6.73e-10!57;CL:0000056!6.73e-10!57;CL:0000355!6.73e-10!57;CL:0000187!1.42e-09!54;CL:0002539!1.20e-07!10;CL:0000220!3.87e-07!246;CL:0000144!4.54e-07!625;CL:0000393!5.76e-07!60;CL:0000211!5.76e-07!60;CL:0002371!7.25e-07!591;CL:0002321!8.67e-07!248 | |ontology_enrichment_celltype=CL:0000055!1.68e-32!180;CL:0000057!1.70e-21!75;CL:0000548!1.74e-12!679;CL:0000004!1.74e-12!679;CL:0000255!1.74e-12!679;CL:0000012!7.07e-12!682;CL:0000183!1.15e-11!59;CL:0002620!1.52e-11!23;CL:0000359!5.84e-11!32;CL:0000192!3.24e-10!42;CL:0000514!3.24e-10!42;CL:0000680!6.73e-10!57;CL:0000056!6.73e-10!57;CL:0000355!6.73e-10!57;CL:0000187!1.42e-09!54;CL:0002539!1.20e-07!10;CL:0000220!3.87e-07!246;CL:0000144!4.54e-07!625;CL:0000393!5.76e-07!60;CL:0000211!5.76e-07!60;CL:0002371!7.25e-07!591;CL:0002321!8.67e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.34e-14;23!CL:0000359;2.49e-12;32!CL:0000057;1.57e-11;73!CL:0002539;6.56e-10;10!CL:0000192;5.82e-08;43!CL:0002320;1.80e-07;188 | |ontology_enrichment_celltype_v019=CL:0002620;2.34e-14;23!CL:0000359;2.49e-12;32!CL:0000057;1.57e-11;73!CL:0002539;6.56e-10;10!CL:0000192;5.82e-08;43!CL:0002320;1.80e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.88e-27,76;CL:0002620,2.17e-14,23;CL:0000359,4.72e-13,32;CL:0000192,2.90e-11,43;CL:0000514,2.90e-11,43;CL:0000680,2.28e-10,58;CL:0000056,2.28e-10,58;CL:0000355,2.28e-10,58;CL:0000187,3.56e-10,55;CL:0002539,4.69e-10,10;CL:0000393,3.87e-08,61;CL:0000211,3.87e-08,61;CL:0000048,2.85e-07,427;CL:0000723,3.16e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;5.82e-08;43 | |ontology_enrichment_development_v019=CL:0000514;5.82e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.11e-16!365;UBERON:0000914!1.65e-15!83;UBERON:0002329!1.65e-15!83;UBERON:0003077!1.65e-15!83;UBERON:0003059!1.65e-15!83;UBERON:0007282!1.65e-15!83;UBERON:0009618!1.65e-15!83;UBERON:0007285!1.65e-15!83;UBERON:0005256!9.20e-13!143;UBERON:0002100!1.72e-12!216;UBERON:0002199!2.14e-12!45;UBERON:0002416!2.14e-12!45;UBERON:0000486!7.27e-12!82;UBERON:0002097!7.53e-12!40;UBERON:0003102!1.83e-11!95;UBERON:0004290!1.98e-11!70;UBERON:0001134!2.02e-08!61;UBERON:0002036!2.02e-08!61;UBERON:0003082!2.02e-08!61;UBERON:0003104!2.31e-08!238;UBERON:0009142!2.31e-08!238;UBERON:0004237!1.20e-07!10;UBERON:0004695!1.20e-07!10;UBERON:0002111!1.20e-07!10;UBERON:0004178!1.20e-07!10;UBERON:0002385!1.30e-07!63;UBERON:0001015!1.30e-07!63;UBERON:0000383!1.30e-07!63;UBERON:0000481!4.51e-07!347;UBERON:0001637!9.31e-07!42;UBERON:0003509!9.31e-07!42;UBERON:0004572!9.31e-07!42 | |ontology_enrichment_uberon=UBERON:0000475!1.11e-16!365;UBERON:0000914!1.65e-15!83;UBERON:0002329!1.65e-15!83;UBERON:0003077!1.65e-15!83;UBERON:0003059!1.65e-15!83;UBERON:0007282!1.65e-15!83;UBERON:0009618!1.65e-15!83;UBERON:0007285!1.65e-15!83;UBERON:0005256!9.20e-13!143;UBERON:0002100!1.72e-12!216;UBERON:0002199!2.14e-12!45;UBERON:0002416!2.14e-12!45;UBERON:0000486!7.27e-12!82;UBERON:0002097!7.53e-12!40;UBERON:0003102!1.83e-11!95;UBERON:0004290!1.98e-11!70;UBERON:0001134!2.02e-08!61;UBERON:0002036!2.02e-08!61;UBERON:0003082!2.02e-08!61;UBERON:0003104!2.31e-08!238;UBERON:0009142!2.31e-08!238;UBERON:0004237!1.20e-07!10;UBERON:0004695!1.20e-07!10;UBERON:0002111!1.20e-07!10;UBERON:0004178!1.20e-07!10;UBERON:0002385!1.30e-07!63;UBERON:0001015!1.30e-07!63;UBERON:0000383!1.30e-07!63;UBERON:0000481!4.51e-07!347;UBERON:0001637!9.31e-07!42;UBERON:0003509!9.31e-07!42;UBERON:0004572!9.31e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;6.56e-10;10!UBERON:0004695;6.56e-10;10!UBERON:0002111;6.56e-10;10!UBERON:0004178;6.56e-10;10!UBERON:0002097;2.79e-09;41!UBERON:0002199;1.08e-08;46!UBERON:0002416;1.08e-08;46!UBERON:0003102;1.26e-07;50!UBERON:0004573;3.56e-07;33!UBERON:0004571;3.56e-07;33!UBERON:0002384;4.67e-07;198!UBERON:0000075;6.21e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0004237;6.56e-10;10!UBERON:0004695;6.56e-10;10!UBERON:0002111;6.56e-10;10!UBERON:0004178;6.56e-10;10!UBERON:0002097;2.79e-09;41!UBERON:0002199;1.08e-08;46!UBERON:0002416;1.08e-08;46!UBERON:0003102;1.26e-07;50!UBERON:0004573;3.56e-07;33!UBERON:0004571;3.56e-07;33!UBERON:0002384;4.67e-07;198!UBERON:0000075;6.21e-07;16 | ||
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| ||
|short_description=p4@FOXD1 | |short_description=p4@FOXD1 | ||
}} | }} |
Latest revision as of 16:01, 18 September 2015
Short description: | p4@FOXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXD1_5end |
Coexpression cluster: | C2827_Pericytes_Osteoblast_Smooth_astrocytoma_Fibroblast_transitionalcell_alveolar |
Association with transcript: | 289bp_to_ENST00000499003_5end |
EntrezGene: | FOXD1 |
HGNC: | 3802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.88e-27 | 76 |
skin fibroblast | 2.17e-14 | 23 |
vascular associated smooth muscle cell | 4.72e-13 | 32 |
smooth muscle cell | 2.90e-11 | 43 |
smooth muscle myoblast | 2.90e-11 | 43 |
muscle precursor cell | 2.28e-10 | 58 |
myoblast | 2.28e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.28e-10 | 58 |
muscle cell | 3.56e-10 | 55 |
aortic smooth muscle cell | 4.69e-10 | 10 |
electrically responsive cell | 3.87e-08 | 61 |
electrically active cell | 3.87e-08 | 61 |
multi fate stem cell | 2.85e-07 | 427 |
somatic stem cell | 3.16e-07 | 433 |