FFCP PHASE1:Hg19::chr9:14910219..14910242,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158326 | |EntrezGene=158326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23399 | |HGNC=23399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003zlm.2_5end | |association_with_transcript=0bp_to_uc003zlm.2_5end | ||
|cluster_id=chr9:14910219..14910242,- | |||
|coexpression_cluster_id=C1288 | |coexpression_cluster_id=C1288 | ||
|description=CAGE_peak_5_at_FREM1_5end | |description=CAGE_peak_5_at_FREM1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.40e-17;5!CL:0000163;1.83e-09;9 | |ontology_enrichment_celltype_v019=CL:0000097;6.40e-17;5!CL:0000163;1.83e-09;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.10e-16,5;CL:0002028,1.10e-16,5;CL:0000163,2.45e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.90e-11;2!UBERON:0006215;2.57e-08;3!UBERON:0006241;5.24e-08;3!UBERON:0003057;5.24e-08;3!UBERON:0000358;8.72e-07;1 | |ontology_enrichment_development_v019=UBERON:0007297;2.90e-11;2!UBERON:0006215;2.57e-08;3!UBERON:0006241;5.24e-08;3!UBERON:0003057;5.24e-08;3!UBERON:0000358;8.72e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-31!115;UBERON:0003076!2.84e-14!15;UBERON:0003057!2.84e-14!15;UBERON:0005743!6.02e-14!86;UBERON:0001017!6.23e-14!82;UBERON:0000073!1.12e-13!94;UBERON:0001016!1.12e-13!94;UBERON:0001049!4.97e-12!57;UBERON:0005068!4.97e-12!57;UBERON:0006241!4.97e-12!57;UBERON:0007135!4.97e-12!57;UBERON:0002346!5.52e-11!90;UBERON:0004733!5.48e-10!12;UBERON:0002028!5.48e-10!12;UBERON:0007277!5.48e-10!12;UBERON:0000955!2.68e-09!69;UBERON:0006238!2.68e-09!69;UBERON:0002616!3.86e-09!59;UBERON:0004732!4.53e-09!13;UBERON:0003075!6.93e-09!86;UBERON:0007284!6.93e-09!86;UBERON:0000924!1.34e-07!173;UBERON:0006601!1.34e-07!173;UBERON:0002298!8.46e-07!8;UBERON:0006947!9.88e-07!3;UBERON:0004054!9.88e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!4.08e-31!115;UBERON:0003076!2.84e-14!15;UBERON:0003057!2.84e-14!15;UBERON:0005743!6.02e-14!86;UBERON:0001017!6.23e-14!82;UBERON:0000073!1.12e-13!94;UBERON:0001016!1.12e-13!94;UBERON:0001049!4.97e-12!57;UBERON:0005068!4.97e-12!57;UBERON:0006241!4.97e-12!57;UBERON:0007135!4.97e-12!57;UBERON:0002346!5.52e-11!90;UBERON:0004733!5.48e-10!12;UBERON:0002028!5.48e-10!12;UBERON:0007277!5.48e-10!12;UBERON:0000955!2.68e-09!69;UBERON:0006238!2.68e-09!69;UBERON:0002616!3.86e-09!59;UBERON:0004732!4.53e-09!13;UBERON:0003075!6.93e-09!86;UBERON:0007284!6.93e-09!86;UBERON:0000924!1.34e-07!173;UBERON:0006601!1.34e-07!173;UBERON:0002298!8.46e-07!8;UBERON:0006947!9.88e-07!3;UBERON:0004054!9.88e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.39e-16;3!UBERON:0004054;2.39e-16;3!UBERON:0002346;6.10e-13;4!UBERON:0000923;6.10e-13;4!UBERON:0010316;6.10e-13;4!UBERON:0005291;6.10e-13;4!UBERON:0005904;2.14e-12;4!UBERON:0002050;1.90e-10;5!UBERON:0005423;1.90e-10;5!UBERON:0002240;5.24e-08;3!UBERON:0005174;5.24e-08;3!UBERON:0001137;5.24e-08;3!UBERON:0006834;5.13e-07;1!UBERON:0007029;6.24e-07;1!UBERON:0001000;8.72e-07;1!UBERON:0002135;8.72e-07;1!UBERON:0005352;8.72e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0006947;2.39e-16;3!UBERON:0004054;2.39e-16;3!UBERON:0002346;6.10e-13;4!UBERON:0000923;6.10e-13;4!UBERON:0010316;6.10e-13;4!UBERON:0005291;6.10e-13;4!UBERON:0005904;2.14e-12;4!UBERON:0002050;1.90e-10;5!UBERON:0005423;1.90e-10;5!UBERON:0002240;5.24e-08;3!UBERON:0005174;5.24e-08;3!UBERON:0001137;5.24e-08;3!UBERON:0006834;5.13e-07;1!UBERON:0007029;6.24e-07;1!UBERON:0001000;8.72e-07;1!UBERON:0002135;8.72e-07;1!UBERON:0005352;8.72e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.89e-16,3;UBERON:0004054,1.89e-16,3;UBERON:0005904,1.80e-12,4;UBERON:0002240,4.25e-08,3;UBERON:0005174,4.25e-08,3;UBERON:0001137,4.25e-08,3;UBERON:0006834,5.13e-07,1;UBERON:0007029,5.75e-07,1;UBERON:0001000,8.03e-07,1;UBERON:0005352,8.03e-07,1;UBERON:0002135,8.97e-07,1 | |||
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| ||
|short_description=p5@FREM1 | |short_description=p5@FREM1 | ||
}} | }} |
Latest revision as of 18:44, 16 September 2015
Short description: | p5@FREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FREM1_5end |
Coexpression cluster: | C1288_kidney_neuroectodermal_uterus_Mast_skin_rhabdomyosarcoma_ductus |
Association with transcript: | 0bp_to_uc003zlm.2_5end |
EntrezGene: | FREM1 |
HGNC: | 23399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.10e-16 | 5 |
basophil mast progenitor cell | 1.10e-16 | 5 |
endocrine cell | 2.45e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.89e-16 | 3 |
internal male genitalia | 1.89e-16 | 3 |
duct of male reproductive system | 1.80e-12 | 4 |
spinal cord | 4.25e-08 | 3 |
dorsal region element | 4.25e-08 | 3 |
dorsum | 4.25e-08 | 3 |
uterus or analog | 5.13e-07 | 1 |
surface | 5.75e-07 | 1 |
vas deferens | 8.03e-07 | 1 |
spermatic cord | 8.03e-07 | 1 |
mitral valve | 8.97e-07 | 1 |