FFCP PHASE1:Hg19::chr5:172662303..172662320,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1482 | |EntrezGene=1482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2488 | |HGNC=2488 | ||
|TSSclassifier=strong | |||
|UniProt=E5RH49,E9PBU6,P52952,B4DNB6 | |UniProt=E5RH49,E9PBU6,P52952,B4DNB6 | ||
|association_with_transcript=0bp_to_ENST00000517440,NM_001166175,NM_001166176,NM_004387_5end | |association_with_transcript=0bp_to_ENST00000517440,NM_001166175,NM_001166176,NM_004387_5end | ||
|cluster_id=chr5:172662303..172662320,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_2_at_NKX2-5_5end | |description=CAGE_peak_2_at_NKX2-5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002548!5.76e-08!6;CL:0000077!1.06e-07!19 | |ontology_enrichment_celltype=CL:0002548!5.76e-08!6;CL:0000077!1.06e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002548;4.29e-11;6 | |ontology_enrichment_celltype_v019=CL:0002548;4.29e-11;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002548,3.67e-11,6 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.92e-10;4!UBERON:0007284;3.92e-10;4 | |ontology_enrichment_development_v019=UBERON:0005062;3.92e-10;4!UBERON:0007284;3.92e-10;4 | ||
|ontology_enrichment_disease=DOID:0050687!2.00e-13!143;DOID:162!1.58e-11!235;DOID:14566!5.72e-11!239;DOID:305!1.89e-08!106 | |ontology_enrichment_disease=DOID:0050687!2.00e-13!143;DOID:162!1.58e-11!235;DOID:14566!5.72e-11!239;DOID:305!1.89e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:114;6.90e-10;2!DOID:154;7.52e-09;2!DOID:4236;7.52e-09;2!DOID:1909;7.52e-09;2 | |ontology_enrichment_disease_v019=DOID:114;6.90e-10;2!DOID:154;7.52e-09;2!DOID:4236;7.52e-09;2!DOID:1909;7.52e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:114,6.92e-10,2;DOID:1909,4.85e-09,2;DOID:154,5.05e-09,2;DOID:4236,5.05e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.05e-14!27;UBERON:0000948!1.53e-10!24;UBERON:0005498!1.53e-10!24;UBERON:0004140!1.53e-10!24;UBERON:0009881!1.53e-10!24;UBERON:0004141!1.53e-10!24;UBERON:0003084!1.53e-10!24;UBERON:0007005!1.53e-10!24;UBERON:0004139!1.53e-10!24;UBERON:0004291!1.53e-10!24;UBERON:0003103!2.75e-09!69;UBERON:0003978!4.76e-07!3;UBERON:0009751!4.76e-07!3;UBERON:0000946!4.76e-07!3;UBERON:0002523!4.76e-07!3;UBERON:0005983!4.76e-07!3;UBERON:0002165!4.76e-07!3;UBERON:0002062!4.76e-07!3;UBERON:0007280!4.76e-07!3;UBERON:0004151!5.04e-07!3 | |ontology_enrichment_uberon=UBERON:0007100!1.05e-14!27;UBERON:0000948!1.53e-10!24;UBERON:0005498!1.53e-10!24;UBERON:0004140!1.53e-10!24;UBERON:0009881!1.53e-10!24;UBERON:0004141!1.53e-10!24;UBERON:0003084!1.53e-10!24;UBERON:0007005!1.53e-10!24;UBERON:0004139!1.53e-10!24;UBERON:0004291!1.53e-10!24;UBERON:0003103!2.75e-09!69;UBERON:0003978!4.76e-07!3;UBERON:0009751!4.76e-07!3;UBERON:0000946!4.76e-07!3;UBERON:0002523!4.76e-07!3;UBERON:0005983!4.76e-07!3;UBERON:0002165!4.76e-07!3;UBERON:0002062!4.76e-07!3;UBERON:0007280!4.76e-07!3;UBERON:0004151!5.04e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.61e-26;25!UBERON:0000948;4.16e-17;22!UBERON:0003978;2.28e-13;3!UBERON:0000946;2.28e-13;3!UBERON:0004151;2.58e-13;3!UBERON:0002133;2.27e-09;2!UBERON:0002081;2.37e-09;2!UBERON:0003103;6.64e-08;61 | |ontology_enrichment_uberon_v019=UBERON:0007100;9.61e-26;25!UBERON:0000948;4.16e-17;22!UBERON:0003978;2.28e-13;3!UBERON:0000946;2.28e-13;3!UBERON:0004151;2.58e-13;3!UBERON:0002133;2.27e-09;2!UBERON:0002081;2.37e-09;2!UBERON:0003103;6.64e-08;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.24e-23,27;UBERON:0000948,1.56e-15,24;UBERON:0005498,1.56e-15,24;UBERON:0004140,1.56e-15,24;UBERON:0009881,1.56e-15,24;UBERON:0004141,1.56e-15,24;UBERON:0003084,1.56e-15,24;UBERON:0007005,1.56e-15,24;UBERON:0004139,1.56e-15,24;UBERON:0004291,1.56e-15,24;UBERON:0003103,2.95e-15,68;UBERON:0003978,2.54e-13,3;UBERON:0009751,2.54e-13,3;UBERON:0000946,2.54e-13,3;UBERON:0002523,2.54e-13,3;UBERON:0005983,2.54e-13,3;UBERON:0002165,2.54e-13,3;UBERON:0002062,2.54e-13,3;UBERON:0007280,2.54e-13,3;UBERON:0004151,2.87e-13,3;UBERON:0002133,2.53e-09,2;UBERON:0002081,2.63e-09,2;UBERON:0010227,2.63e-09,2 | |||
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| ||
|short_description=p2@NKX2-5 | |short_description=p2@NKX2-5 | ||
}} | }} |
Latest revision as of 01:41, 17 September 2015
Short description: | p2@NKX2-5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKX2-5_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000517440, NM_001166175, NM_001166176, NM_004387_5end |
EntrezGene: | NKX2-5 |
HGNC: | 2488 |
UniProt: | E5RH49E9PBU6P52952B4DNB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 3.67e-11 | 6 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.24e-23 | 27 |
heart | 1.56e-15 | 24 |
primitive heart tube | 1.56e-15 | 24 |
primary heart field | 1.56e-15 | 24 |
anterior lateral plate mesoderm | 1.56e-15 | 24 |
heart tube | 1.56e-15 | 24 |
heart primordium | 1.56e-15 | 24 |
cardiac mesoderm | 1.56e-15 | 24 |
cardiogenic plate | 1.56e-15 | 24 |
heart rudiment | 1.56e-15 | 24 |
compound organ | 2.95e-15 | 68 |
valve | 2.54e-13 | 3 |
cardiac mesenchyme | 2.54e-13 | 3 |
cardial valve | 2.54e-13 | 3 |
tunica intima | 2.54e-13 | 3 |
heart layer | 2.54e-13 | 3 |
endocardium | 2.54e-13 | 3 |
endocardial cushion | 2.54e-13 | 3 |
presumptive endocardium | 2.54e-13 | 3 |
cardiac chamber | 2.87e-13 | 3 |
atrioventricular valve | 2.53e-09 | 2 |
cardiac atrium | 2.63e-09 | 2 |
future cardiac atrium | 2.63e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.92e-10 | 2 |
melanoma | 4.85e-09 | 2 |
mixed cell type cancer | 5.05e-09 | 2 |
carcinosarcoma | 5.05e-09 | 2 |