FFCP PHASE1:Hg19::chr13:48984656..48984665,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:48984656..48984665,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_at_chr13:48984656..48984665,+ | |description=CAGE_peak_at_chr13:48984656..48984665,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!1.88e-16!18;CL:0000789!1.88e-16!18;CL:0002420!1.88e-16!18;CL:0002419!1.88e-16!18;CL:0000790!1.88e-16!18;CL:0000738!9.57e-16!140;CL:0002087!5.37e-13!119;CL:0002031!5.73e-13!124;CL:0000084!1.57e-12!25;CL:0000827!1.57e-12!25;CL:0002032!2.97e-12!165;CL:0000837!2.97e-12!165;CL:0000037!4.27e-12!172;CL:0000566!4.27e-12!172;CL:0000988!8.88e-11!182;CL:0002393!1.11e-10!9;CL:0002397!1.11e-10!9;CL:0002057!3.13e-09!42;CL:0000624!6.82e-09!6;CL:0000860!2.49e-08!45;CL:0000625!3.48e-08!11;CL:0000838!1.08e-07!52;CL:0000542!1.82e-07!53;CL:0000051!1.82e-07!53;CL:0000766!2.42e-07!76;CL:0000875!4.79e-07!3;CL:0002396!4.79e-07!3 | |ontology_enrichment_celltype=CL:0000791!1.88e-16!18;CL:0000789!1.88e-16!18;CL:0002420!1.88e-16!18;CL:0002419!1.88e-16!18;CL:0000790!1.88e-16!18;CL:0000738!9.57e-16!140;CL:0002087!5.37e-13!119;CL:0002031!5.73e-13!124;CL:0000084!1.57e-12!25;CL:0000827!1.57e-12!25;CL:0002032!2.97e-12!165;CL:0000837!2.97e-12!165;CL:0000037!4.27e-12!172;CL:0000566!4.27e-12!172;CL:0000988!8.88e-11!182;CL:0002393!1.11e-10!9;CL:0002397!1.11e-10!9;CL:0002057!3.13e-09!42;CL:0000624!6.82e-09!6;CL:0000860!2.49e-08!45;CL:0000625!3.48e-08!11;CL:0000838!1.08e-07!52;CL:0000542!1.82e-07!53;CL:0000051!1.82e-07!53;CL:0000766!2.42e-07!76;CL:0000875!4.79e-07!3;CL:0002396!4.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000898;1.08e-16;3!CL:0000895;6.82e-13;1!CL:0000624;8.24e-09;6!CL:0000815;2.43e-07;2!CL:0000792;2.43e-07;2!CL:0002677;2.43e-07;2!CL:0001014;2.91e-07;2!CL:0000771;2.91e-07;2!CL:0001016;2.91e-07;2 | |ontology_enrichment_celltype_v019=CL:0000898;1.08e-16;3!CL:0000895;6.82e-13;1!CL:0000624;8.24e-09;6!CL:0000815;2.43e-07;2!CL:0000792;2.43e-07;2!CL:0002677;2.43e-07;2!CL:0001014;2.91e-07;2!CL:0000771;2.91e-07;2!CL:0001016;2.91e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000898,8.55e-17,3;CL:0000810,4.77e-13,1;CL:0000895,4.77e-13,1;CL:0002436,4.77e-13,1;CL:0002427,4.77e-13,1;CL:0002428,4.77e-13,1;CL:0002429,4.77e-13,1;CL:0002433,4.77e-13,1;CL:0002431,4.77e-13,1;CL:0002432,4.77e-13,1;CL:0000624,7.33e-09,6;CL:0000815,2.43e-07,2;CL:0000792,2.43e-07,2;CL:0002677,2.43e-07,2;CL:0000771,3.09e-07,2;CL:0001014,3.28e-07,2;CL:0001016,3.28e-07,2;CL:0000893,3.70e-07,2;CL:0002489,3.70e-07,2;CL:0000809,3.70e-07,2;CL:0000808,3.70e-07,2;CL:0000894,3.70e-07,2;CL:0000806,3.70e-07,2;CL:0000807,3.70e-07,2;CL:0000805,3.70e-07,2;CL:0002425,3.70e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002427;6.82e-13;1!UBERON:0010115;6.82e-13;1!CL:0002425;4.42e-07;2 | |ontology_enrichment_development_v019=CL:0002427;6.82e-13;1!UBERON:0010115;6.82e-13;1!CL:0002425;4.42e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!2.16e-08!10;UBERON:0009145!2.16e-08!10;UBERON:0002370!5.95e-08!4;UBERON:0005058!5.95e-08!4;UBERON:0009113!5.95e-08!4;UBERON:0003295!5.95e-08!4;UBERON:0005562!5.95e-08!4;UBERON:0003351!1.27e-07!6;UBERON:0006562!1.58e-07!11;UBERON:0002390!2.93e-07!102;UBERON:0003061!2.93e-07!102;UBERON:0007023!3.86e-07!115 | |ontology_enrichment_uberon=UBERON:0001042!2.16e-08!10;UBERON:0009145!2.16e-08!10;UBERON:0002370!5.95e-08!4;UBERON:0005058!5.95e-08!4;UBERON:0009113!5.95e-08!4;UBERON:0003295!5.95e-08!4;UBERON:0005562!5.95e-08!4;UBERON:0003351!1.27e-07!6;UBERON:0006562!1.58e-07!11;UBERON:0002390!2.93e-07!102;UBERON:0003061!2.93e-07!102;UBERON:0007023!3.86e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002363;6.82e-13;1!UBERON:0002360;4.42e-07;2!UBERON:0000094;4.42e-07;2!UBERON:0010743;4.42e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002363;6.82e-13;1!UBERON:0002360;4.42e-07;2!UBERON:0000094;4.42e-07;2!UBERON:0010743;4.42e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,9.73e-13,1;UBERON:0007645,9.73e-13,1;UBERON:0007647,9.73e-13,1;UBERON:0010115,9.73e-13,1;UBERON:0002360,5.28e-07,2;UBERON:0000094,5.28e-07,2;UBERON:0010743,5.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0.619412741790207,0.28769239232215,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0.850417199860174,1.04829322754188,0,0,0,0.285012743741249,0.99458338599545,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.393419540227666,0.393010762749165,0.411202997999018,0.167186495390678,0,0.946895611469467,0,1.33692548262208,3.53527088969805,4.43067789167242,4.87446954777028,0.512365278902701,0.130059347559878,1.64437904603676,2.76350017785848,1.15921234294021,0.444859689486181,0.267540828089713,0,2.83273356743915,1.53288197440768,2.74901956386104,1.51811815211702,0.637130828648193,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0.821127996921047,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.872901148395775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4747128070665,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.981542335574726,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0.217716747896961,0,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0.619412741790207,0.28769239232215,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0.850417199860174,1.04829322754188,0,0,0,0.285012743741249,0.99458338599545,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.393419540227666,0.393010762749165,0.411202997999018,0.167186495390678,0,0.946895611469467,0,1.33692548262208,3.53527088969805,4.43067789167242,4.87446954777028,0.512365278902701,0.130059347559878,1.64437904603676,2.76350017785848,1.15921234294021,0.444859689486181,0.267540828089713,0,2.83273356743915,1.53288197440768,2.74901956386104,1.51811815211702,0.637130828648193,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0.821127996921047,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.268675568108545,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,1.0741718536843,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.872901148395775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4747128070665,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.981542335574726,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0.217716747896961,0,0.5388164241167,0.215166616178029,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p@chr13:48984656..48984665,+ | |short_description=p@chr13:48984656..48984665,+ | ||
}} | }} |
Latest revision as of 16:30, 24 July 2015
Short description: | p@chr13:48984656..48984665, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:48984656..48984665, + |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dura mater | 9.73e-13 | 1 |
future meninx | 9.73e-13 | 1 |
ectomeninx | 9.73e-13 | 1 |
future dura mater | 9.73e-13 | 1 |
meninx | 5.28e-07 | 2 |
membrane organ | 5.28e-07 | 2 |
meningeal cluster | 5.28e-07 | 2 |