FFCP PHASE1:Hg19::chr17:73083852..73083869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9121 | |EntrezGene=9121 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10926 | |HGNC=10926 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_uc002jmr.2_5end | |association_with_transcript=30bp_to_uc002jmr.2_5end | ||
|cluster_id=chr17:73083852..73083869,+ | |||
|description=CAGE_peak_3_at_SLC16A5_5end | |description=CAGE_peak_3_at_SLC16A5_5end | ||
|id=chr17:73083852..73083869,+ | |id=chr17:73083852..73083869,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.16e-25!76;CL:0002194!1.29e-23!63;CL:0000576!1.29e-23!63;CL:0000040!1.29e-23!63;CL:0000559!1.29e-23!63;CL:0000557!9.34e-23!71;CL:0000839!1.34e-22!70;CL:0002057!2.59e-22!42;CL:0000763!9.93e-22!112;CL:0000049!9.93e-22!112;CL:0002009!1.01e-21!65;CL:0000860!1.12e-21!45;CL:0000037!4.03e-09!172;CL:0000566!4.03e-09!172;CL:0002032!8.17e-09!165;CL:0000837!8.17e-09!165;CL:0000738!4.72e-08!140;CL:0000988!2.57e-07!182;CL:0002087!3.01e-07!119 | |ontology_enrichment_celltype=CL:0000766!1.16e-25!76;CL:0002194!1.29e-23!63;CL:0000576!1.29e-23!63;CL:0000040!1.29e-23!63;CL:0000559!1.29e-23!63;CL:0000557!9.34e-23!71;CL:0000839!1.34e-22!70;CL:0002057!2.59e-22!42;CL:0000763!9.93e-22!112;CL:0000049!9.93e-22!112;CL:0002009!1.01e-21!65;CL:0000860!1.12e-21!45;CL:0000037!4.03e-09!172;CL:0000566!4.03e-09!172;CL:0002032!8.17e-09!165;CL:0000837!8.17e-09!165;CL:0000738!4.72e-08!140;CL:0000988!2.57e-07!182;CL:0002087!3.01e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-25;33!CL:0002057;1.09e-25;33!CL:0000473;2.51e-24;39!CL:0000234;2.51e-24;39!CL:0000576;8.56e-23;48!CL:0000766;2.43e-20;69!CL:0000763;2.75e-13;100 | |ontology_enrichment_celltype_v019=CL:0000860;1.09e-25;33!CL:0002057;1.09e-25;33!CL:0000473;2.51e-24;39!CL:0000234;2.51e-24;39!CL:0000576;8.56e-23;48!CL:0000766;2.43e-20;69!CL:0000763;2.75e-13;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.92e-42,72;CL:0000557,2.97e-39,67;CL:0002194,3.39e-39,59;CL:0000576,3.39e-39,59;CL:0000040,3.39e-39,59;CL:0000559,3.39e-39,59;CL:0000473,4.10e-39,48;CL:0000234,4.10e-39,48;CL:0000839,4.55e-38,66;CL:0002009,2.69e-37,61;CL:0000860,1.17e-36,42;CL:0002057,1.17e-36,42;CL:0000763,4.89e-36,108;CL:0000049,4.89e-36,108;CL:0000037,8.27e-20,168;CL:0002032,1.82e-19,161;CL:0000837,1.82e-19,161;CL:0000988,3.72e-18,177;CL:0000738,3.90e-17,136;CL:0002087,3.94e-16,115;CL:0002031,7.70e-16,120;CL:0002393,9.88e-09,9;CL:0002397,9.88e-09,9;CL:0000134,1.35e-07,354;CL:0002320,2.64e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.89e-26;42!CL:0000049;5.43e-12;108 | |ontology_enrichment_development_v019=CL:0002057;7.89e-26;42!CL:0000049;5.43e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.79e-22!80;UBERON:0001474!3.27e-20!86;UBERON:0002390!1.23e-19!102;UBERON:0003061!1.23e-19!102;UBERON:0002193!3.68e-18!112;UBERON:0004765!5.33e-18!101;UBERON:0001434!5.33e-18!101;UBERON:0002405!4.51e-11!115 | |ontology_enrichment_uberon=UBERON:0002371!6.79e-22!80;UBERON:0001474!3.27e-20!86;UBERON:0002390!1.23e-19!102;UBERON:0003061!1.23e-19!102;UBERON:0002193!3.68e-18!112;UBERON:0004765!5.33e-18!101;UBERON:0001434!5.33e-18!101;UBERON:0002405!4.51e-11!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.17e-37,76;UBERON:0002390,2.40e-34,98;UBERON:0003061,2.40e-34,98;UBERON:0001474,3.45e-34,82;UBERON:0002193,1.15e-32,108;UBERON:0002405,2.00e-32,93;UBERON:0004765,1.90e-30,90;UBERON:0001434,2.32e-26,100;UBERON:0003081,6.34e-11,203;UBERON:0002204,2.16e-10,167;UBERON:0002384,7.82e-07,371 | |||
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|phase1_expression=0.726713517082227,0.856402095563933,0.563817616383885,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,0,0.783556884599516,0.245733936501509,1.39560233594486,0,0.527533956456907,0.74259811776028,1.32558950291166,0,0.602694528023977,0.730310090387373,0,0.369363174230364,0.408001382488506,0.313454721478088,0.286235987131057,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.157421562627358,2.36018566109342,0.383829398097213,0.928896739896456,0,0.30120591877825,1.10926203050036,0,0,2.05520307534393,0,3.20871115952227,1.30206522429511,1.56740831967947,1.6194683300949,2.06060454107349,3.92575244704825,3.40088349319928,2.42584061187816,6.27558399645349,2.87817521615278,3.40677007984614,2.58923153089935,1.7931249457037,0.945928919554341,3.10271112662957,2.5819387343353,4.06279459783025,2.07066573496865,1.36453075028923,0.674170453335254,4.59125838556354,2.88836124368484,2.55734850319616,3.29851300186716,2.19410023383795,2.55734850319616,4.64334781805734,10.7803192691317,3.11411124497787,2.76373531782418,1.5644487552606,1.73751075764093,2.42159801053347,2.94622108790052,2.53169909952708,4.01385043992689,4.46469029926591,3.14487968262564,1.46027220490444,1.65194582125657,1.28580469357664,6.84030584978997,3.77941686678271,2.92262646023414,0,0,1.77901850772711,0,0.800791974072025,0,0,0,0,0,0.382273228125229,2.64342657158052,0.560508562981536,1.84368859342554,0.983548850569165,0.393010762749165,0.205601498999509,0.334372990781356,0,0.946895611469467,0,0.334231370655521,0.294605907474837,0.221533894583621,0.270803863765016,0.384273959177026,0.130059347559878,0.657751618414705,0.276350017785848,0.579606171470105,0.741432815810302,1.60524496853828,2.09071047609954,0.226618685395132,1.14966148080576,0.34362744548263,0.253019692019503,0,0,0,0.451725357233318,0,0,0.710331756132051,1.64225599384209,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.579386075843295,0,0.973269740605272,0.189069634328136,0,0.087834785693126,2.0956652079634,0.364295288292542,1.48313777113772,1.9472843619281,1.74129737299267,1.32957960518865,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0.825354125820202,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,1.31780417436063,3.87780264148325,0.872188104285069,0.993943903390637,0.12663051166458,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.538842688278752,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.597794722207204,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0.309977343527296,0,1.23633464639278,0.910161361938026,2.15585442544872,0.168336113954066,0.375355559615893,0.277064115484183,0.438977620880838,0.30648779579902,1.35214253015937,0.113432183160021,0.538168907066586,0.640672166455702,0.423863802319124,1.50045548042201,0.618315175430633,1.03056216018252,1.11670113798954,1.18143432568886,1.65642908774038,1.00973509697646,0.920498986422993,0.80823028409406,0.710019185033229,0.806016785821122,0.67824236924195,0.193260853163297,0.272746120590835,0.286804595389004,0.609868530647977,0,0.348581828608555,0.414644220061482,0.504641701751257,0,0,0.643240938192885,0,1.39310378409594,2.16563844500876,0.354920400119532,0.674338760312407,0.723033089650446,0.441175890929576,0.435758888184812,0.71181185733329,0.943819157121151,0.392442930250692,0,0,0,0,0,0,0,0,0,1.35287282397425,0.171567810298526,0.219500570817251,1.1240175325762,0.301586917234893,0.370353780634118,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,1.23108503043699,0.936017060556951,1.0404181360211,0,0.335964256397719,0,0,0,0,0,0.44024217006613,1.4512968087854,2.01767934783746,2.5248486685276,0.63497894292169,1.14596527667483,2.34434894420094,1.71072446022705,0.514137463516618,0.300343057843917,0.857479297891735,0,0,0.1466765716419,0.517086863031111,7.15312891703765,0.845302752556,0.26593811658487,0,0.771622122786426,0,0.532844358032199,0.142977993658148,1.08524321078289,0.823240336780769,0.325736184293735,0.355391948742546,0,0.904318131178758,0,0.499864955910285,3.64871341923571,1.00451418286425,4.21667878966063,0,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0.197030760201927,0.215627574859517,0.77005821767849,0,0,0,0.167516265334349,0,2.24702107184155,0,3.72973962092432,0.981531933753119,0.500170521059677,0.271265023699736,0.623912584592421,1.24900292158013,0.788512075169673,0.468565659970853,0.601892199455438,2.27407504055985,4.1389228517002,0,0.368738337083406,0.521301686808497,0,0,0.82707210449155,1.07857100409308,1.28073069364133,3.94065842880137,0,1.20956117331872,0.744323423456331,1.53461973288062,1.40330047216537,0.768834895534206,1.02341449813341,0.965123526861645,0,0,0.710246901252508,0.0821271560138091,0,0.232420756919918,1.32945394550784,1.00253235151642,0.460404944679482,0.229628896329213,0.364182336013434,0.655622074797121,1.35359883872224,0.462092022626489,0,0,0.105551628892876,0,0.340187410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| ||
|short_description=p3@SLC16A5 | |short_description=p3@SLC16A5 | ||
}} | }} |
Latest revision as of 09:51, 17 September 2015
Short description: | p3@SLC16A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC16A5_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_uc002jmr.2_5end |
EntrezGene: | SLC16A5 |
HGNC: | 10926 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.92e-42 | 72 |
granulocyte monocyte progenitor cell | 2.97e-39 | 67 |
monopoietic cell | 3.39e-39 | 59 |
monocyte | 3.39e-39 | 59 |
monoblast | 3.39e-39 | 59 |
promonocyte | 3.39e-39 | 59 |
defensive cell | 4.10e-39 | 48 |
phagocyte | 4.10e-39 | 48 |
myeloid lineage restricted progenitor cell | 4.55e-38 | 66 |
macrophage dendritic cell progenitor | 2.69e-37 | 61 |
classical monocyte | 1.17e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.17e-36 | 42 |
myeloid cell | 4.89e-36 | 108 |
common myeloid progenitor | 4.89e-36 | 108 |
hematopoietic stem cell | 8.27e-20 | 168 |
hematopoietic oligopotent progenitor cell | 1.82e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-19 | 161 |
hematopoietic cell | 3.72e-18 | 177 |
leukocyte | 3.90e-17 | 136 |
nongranular leukocyte | 3.94e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 7.70e-16 | 120 |
intermediate monocyte | 9.88e-09 | 9 |
CD14-positive, CD16-positive monocyte | 9.88e-09 | 9 |
mesenchymal cell | 1.35e-07 | 354 |
connective tissue cell | 2.64e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.17e-37 | 76 |
hematopoietic system | 2.40e-34 | 98 |
blood island | 2.40e-34 | 98 |
bone element | 3.45e-34 | 82 |
hemolymphoid system | 1.15e-32 | 108 |
immune system | 2.00e-32 | 93 |
skeletal element | 1.90e-30 | 90 |
skeletal system | 2.32e-26 | 100 |
lateral plate mesoderm | 6.34e-11 | 203 |
musculoskeletal system | 2.16e-10 | 167 |
connective tissue | 7.82e-07 | 371 |