FFCP PHASE1:Hg19::chr12:96830523..96830532,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:96830523..96830532,+ | |||
|coexpression_cluster_id=C1696 | |coexpression_cluster_id=C1696 | ||
|description=CAGE_peak_at_chr12:96830523..96830532,+ | |description=CAGE_peak_at_chr12:96830523..96830532,+ | ||
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|ontology_enrichment_celltype=CL:0002139!2.42e-90!24;CL:0000071!2.99e-66!18;CL:0002546!2.99e-66!18;CL:0000115!4.13e-60!35;CL:0002078!9.07e-51!44;CL:0000222!1.28e-40!119;CL:0000213!8.32e-38!57;CL:0000215!8.32e-38!57;CL:1000413!6.35e-30!9;CL:0002544!4.81e-26!6;CL:0002543!6.48e-26!6;CL:0005020!2.85e-25!6;CL:0002138!2.85e-25!6;CL:0005022!2.85e-25!6;CL:0000220!8.78e-20!246;CL:0002321!1.49e-19!248;CL:0000359!9.01e-19!32;CL:0000076!3.05e-16!62;CL:0002539!1.20e-14!10;CL:0002144!8.40e-14!3;CL:0000192!1.26e-13!42;CL:0000514!1.26e-13!42;CL:0002618!1.88e-13!3;CL:0002494!4.47e-11!16;CL:0000183!1.70e-10!59;CL:0000187!5.52e-10!54;CL:0002545!7.05e-10!2;CL:0000569!2.49e-09!4;CL:0000011!2.49e-09!4;CL:0000680!2.57e-09!57;CL:0000056!2.57e-09!57;CL:0000355!2.57e-09!57;CL:0000393!1.02e-08!60;CL:0000211!1.02e-08!60 | |ontology_enrichment_celltype=CL:0002139!2.42e-90!24;CL:0000071!2.99e-66!18;CL:0002546!2.99e-66!18;CL:0000115!4.13e-60!35;CL:0002078!9.07e-51!44;CL:0000222!1.28e-40!119;CL:0000213!8.32e-38!57;CL:0000215!8.32e-38!57;CL:1000413!6.35e-30!9;CL:0002544!4.81e-26!6;CL:0002543!6.48e-26!6;CL:0005020!2.85e-25!6;CL:0002138!2.85e-25!6;CL:0005022!2.85e-25!6;CL:0000220!8.78e-20!246;CL:0002321!1.49e-19!248;CL:0000359!9.01e-19!32;CL:0000076!3.05e-16!62;CL:0002539!1.20e-14!10;CL:0002144!8.40e-14!3;CL:0000192!1.26e-13!42;CL:0000514!1.26e-13!42;CL:0002618!1.88e-13!3;CL:0002494!4.47e-11!16;CL:0000183!1.70e-10!59;CL:0000187!5.52e-10!54;CL:0002545!7.05e-10!2;CL:0000569!2.49e-09!4;CL:0000011!2.49e-09!4;CL:0000680!2.57e-09!57;CL:0000056!2.57e-09!57;CL:0000355!2.57e-09!57;CL:0000393!1.02e-08!60;CL:0000211!1.02e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.11e-106;24!CL:0000071;2.36e-87;18!CL:0000115;3.39e-60;36!CL:0002078;1.13e-37;45!CL:1000413;8.66e-37;9!CL:0002543;8.77e-36;6!CL:0002544;9.59e-36;6!CL:0000213;3.52e-30;58!CL:0000215;3.52e-30;58!CL:0002545;3.57e-27;2!CL:0002138;1.74e-20;6!CL:0002144;1.77e-18;3!CL:0000076;3.77e-14;63 | |ontology_enrichment_celltype_v019=CL:0002139;5.11e-106;24!CL:0000071;2.36e-87;18!CL:0000115;3.39e-60;36!CL:0002078;1.13e-37;45!CL:1000413;8.66e-37;9!CL:0002543;8.77e-36;6!CL:0002544;9.59e-36;6!CL:0000213;3.52e-30;58!CL:0000215;3.52e-30;58!CL:0002545;3.57e-27;2!CL:0002138;1.74e-20;6!CL:0002144;1.77e-18;3!CL:0000076;3.77e-14;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.57e-106,24;CL:0000071,1.93e-87,18;CL:0002546,1.93e-87,18;CL:0000115,2.41e-70,36;CL:0002078,4.85e-56,45;CL:0000213,3.33e-43,58;CL:0000215,3.33e-43,58;CL:1000413,1.05e-36,9;CL:0002543,5.61e-36,6;CL:0002544,8.78e-36,6;CL:0002545,3.58e-27,2;CL:0000076,3.04e-24,63;CL:0000222,4.02e-23,121;CL:0005020,1.86e-20,6;CL:0002138,1.86e-20,6;CL:0005022,1.86e-20,6;CL:0002144,1.77e-18,3;CL:0002321,2.72e-10,250;CL:0000066,9.71e-09,253 | |||
|ontology_enrichment_development_v019=CL:0002546;2.36e-87;18!CL:0005022;1.74e-20;6!CL:0000222;5.73e-09;121 | |ontology_enrichment_development_v019=CL:0002546;2.36e-87;18!CL:0005022;1.74e-20;6!CL:0000222;5.73e-09;121 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.49e-80!69;UBERON:0002049!2.77e-69!79;UBERON:0007798!2.77e-69!79;UBERON:0001986!2.99e-66!18;UBERON:0004638!2.99e-66!18;UBERON:0004852!2.99e-66!18;UBERON:0001981!8.00e-65!60;UBERON:0007500!8.00e-65!60;UBERON:0004537!8.00e-65!60;UBERON:0006965!8.00e-65!60;UBERON:0004535!7.81e-62!110;UBERON:0004872!5.25e-60!84;UBERON:0001009!5.91e-60!113;UBERON:0000487!1.98e-53!22;UBERON:0006914!5.55e-52!25;UBERON:0001637!5.74e-47!42;UBERON:0003509!5.74e-47!42;UBERON:0004572!5.74e-47!42;UBERON:0004573!8.88e-46!33;UBERON:0004571!8.88e-46!33;UBERON:0003914!7.16e-43!118;UBERON:0000947!1.51e-36!21;UBERON:0010191!1.51e-36!21;UBERON:0003915!6.35e-30!9;UBERON:0004700!6.35e-30!9;UBERON:0001917!6.35e-30!9;UBERON:0004111!1.25e-24!241;UBERON:0000025!1.41e-22!194;UBERON:0000490!1.54e-20!138;UBERON:0000477!1.60e-20!286;UBERON:0003081!2.01e-19!216;UBERON:0001473!8.43e-19!8;UBERON:0004536!8.43e-19!8;UBERON:0006558!8.43e-19!8;UBERON:0001638!4.63e-17!9;UBERON:0003920!4.63e-17!9;UBERON:0004582!4.63e-17!9;UBERON:0002465!6.52e-15!10;UBERON:0004237!1.20e-14!10;UBERON:0004695!1.20e-14!10;UBERON:0002111!1.20e-14!10;UBERON:0004178!1.20e-14!10;UBERON:0001915!8.40e-14!3;UBERON:0001982!8.40e-14!3;UBERON:0000483!6.34e-12!309;UBERON:0000119!9.98e-12!312;UBERON:0005800!7.05e-10!2;UBERON:0001515!7.05e-10!2;UBERON:0001135!1.50e-09!15;UBERON:0001134!1.57e-08!61;UBERON:0002036!1.57e-08!61;UBERON:0003082!1.57e-08!61;UBERON:0002066!3.04e-08!5;UBERON:0002385!3.56e-08!63;UBERON:0001015!3.56e-08!63;UBERON:0000383!3.56e-08!63;UBERON:0004290!4.25e-07!70;UBERON:0000948!4.35e-07!24;UBERON:0005498!4.35e-07!24;UBERON:0004140!4.35e-07!24;UBERON:0009881!4.35e-07!24;UBERON:0004141!4.35e-07!24;UBERON:0003084!4.35e-07!24;UBERON:0007005!4.35e-07!24;UBERON:0004139!4.35e-07!24;UBERON:0004291!4.35e-07!24 | |ontology_enrichment_uberon=UBERON:0000055!1.49e-80!69;UBERON:0002049!2.77e-69!79;UBERON:0007798!2.77e-69!79;UBERON:0001986!2.99e-66!18;UBERON:0004638!2.99e-66!18;UBERON:0004852!2.99e-66!18;UBERON:0001981!8.00e-65!60;UBERON:0007500!8.00e-65!60;UBERON:0004537!8.00e-65!60;UBERON:0006965!8.00e-65!60;UBERON:0004535!7.81e-62!110;UBERON:0004872!5.25e-60!84;UBERON:0001009!5.91e-60!113;UBERON:0000487!1.98e-53!22;UBERON:0006914!5.55e-52!25;UBERON:0001637!5.74e-47!42;UBERON:0003509!5.74e-47!42;UBERON:0004572!5.74e-47!42;UBERON:0004573!8.88e-46!33;UBERON:0004571!8.88e-46!33;UBERON:0003914!7.16e-43!118;UBERON:0000947!1.51e-36!21;UBERON:0010191!1.51e-36!21;UBERON:0003915!6.35e-30!9;UBERON:0004700!6.35e-30!9;UBERON:0001917!6.35e-30!9;UBERON:0004111!1.25e-24!241;UBERON:0000025!1.41e-22!194;UBERON:0000490!1.54e-20!138;UBERON:0000477!1.60e-20!286;UBERON:0003081!2.01e-19!216;UBERON:0001473!8.43e-19!8;UBERON:0004536!8.43e-19!8;UBERON:0006558!8.43e-19!8;UBERON:0001638!4.63e-17!9;UBERON:0003920!4.63e-17!9;UBERON:0004582!4.63e-17!9;UBERON:0002465!6.52e-15!10;UBERON:0004237!1.20e-14!10;UBERON:0004695!1.20e-14!10;UBERON:0002111!1.20e-14!10;UBERON:0004178!1.20e-14!10;UBERON:0001915!8.40e-14!3;UBERON:0001982!8.40e-14!3;UBERON:0000483!6.34e-12!309;UBERON:0000119!9.98e-12!312;UBERON:0005800!7.05e-10!2;UBERON:0001515!7.05e-10!2;UBERON:0001135!1.50e-09!15;UBERON:0001134!1.57e-08!61;UBERON:0002036!1.57e-08!61;UBERON:0003082!1.57e-08!61;UBERON:0002066!3.04e-08!5;UBERON:0002385!3.56e-08!63;UBERON:0001015!3.56e-08!63;UBERON:0000383!3.56e-08!63;UBERON:0004290!4.25e-07!70;UBERON:0000948!4.35e-07!24;UBERON:0005498!4.35e-07!24;UBERON:0004140!4.35e-07!24;UBERON:0009881!4.35e-07!24;UBERON:0004141!4.35e-07!24;UBERON:0003084!4.35e-07!24;UBERON:0007005!4.35e-07!24;UBERON:0004139!4.35e-07!24;UBERON:0004291!4.35e-07!24 | ||
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|short_description=p@chr12:96830523..96830532,+ | |short_description=p@chr12:96830523..96830532,+ | ||
}} | }} |
Latest revision as of 13:56, 24 July 2015
Short description: | p@chr12:96830523..96830532, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:96830523..96830532, + |
Coexpression cluster: | C1696_Endothelial_Renal_chronic_Lymphatic_Fibroblast_Hepatic_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.57e-106 | 24 |
blood vessel endothelial cell | 1.93e-87 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.93e-87 | 18 |
endothelial cell | 2.41e-70 | 36 |
meso-epithelial cell | 4.85e-56 | 45 |
lining cell | 3.33e-43 | 58 |
barrier cell | 3.33e-43 | 58 |
endothelial cell of artery | 1.05e-36 | 9 |
vein endothelial cell | 5.61e-36 | 6 |
aortic endothelial cell | 8.78e-36 | 6 |
thoracic aorta endothelial cell | 3.58e-27 | 2 |
squamous epithelial cell | 3.04e-24 | 63 |
mesodermal cell | 4.02e-23 | 121 |
lymphangioblast | 1.86e-20 | 6 |
endothelial cell of lymphatic vessel | 1.86e-20 | 6 |
vascular lymphangioblast | 1.86e-20 | 6 |
capillary endothelial cell | 1.77e-18 | 3 |
embryonic cell | 2.72e-10 | 250 |
epithelial cell | 9.71e-09 | 253 |