FFCP PHASE1:Mm9::chr5:30339681..30339683,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16193 | |EntrezGene=16193 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=554 | |MCL_coexpression_id=554 | ||
|TSSclassifier=NA | |||
|UniProt=P08505,A2RTD1 | |UniProt=P08505,A2RTD1 | ||
|association_with_transcript=-17bp_to_ENSMUST00000026845,NM_031168,uc008wuu.1,uc008wuv.1_5end | |association_with_transcript=-17bp_to_ENSMUST00000026845,NM_031168,uc008wuu.1,uc008wuv.1_5end | ||
|cluster_id=chr5:30339681..30339683,+ | |||
|description=CAGE_peak_1_at_Il6_5end | |description=CAGE_peak_1_at_Il6_5end | ||
|id=chr5:30339681..30339683,+ | |id=chr5:30339681..30339683,+ | ||
|ontology_enrichment_celltype=CL:0000222!4.63e-11!7;CL:0000680!1.45e-09!6;CL:0000183!1.45e-09!6;CL:0000187!1.45e-09!6;CL:0000056!1.45e-09!6 | |ontology_enrichment_celltype=CL:0000222!4.63e-11!7;CL:0000680!1.45e-09!6;CL:0000183!1.45e-09!6;CL:0000187!1.45e-09!6;CL:0000056!1.45e-09!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.50e-17,7;CL:0000215,5.82e-16,3;CL:0000680,7.63e-13,6;CL:0000187,7.63e-13,6;CL:0000056,7.63e-13,6;CL:0000049,1.96e-12,19;CL:0000557,4.65e-12,7;CL:0000217,3.48e-11,2;CL:0000328,3.48e-11,2;CL:0002573,3.48e-11,2;CL:0002376,3.48e-11,2;CL:0000218,3.48e-11,2;CL:0000692,3.48e-11,2;CL:0002377,3.48e-11,2;CL:0002375,3.48e-11,2;CL:0000355,1.24e-08,9;CL:0000219,5.12e-08,54;CL:0000034,6.21e-08,97;CL:0002494,2.40e-07,3;CL:0000737,2.40e-07,3;CL:0000746,2.40e-07,3;CL:0000513,2.40e-07,3;CL:0000192,4.30e-07,3;CL:0000359,4.30e-07,3;CL:0002539,4.30e-07,3;CL:0000514,4.30e-07,3;CL:0000988,4.40e-07,32;CL:0002032,4.40e-07,32;CL:0000037,4.40e-07,32;CL:0000837,4.40e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.29e-09,5;UBERON:0007500,3.29e-09,5;UBERON:0001981,3.29e-09,5;UBERON:0002049,3.29e-09,5;UBERON:0007798,3.29e-09,5;UBERON:0004537,3.29e-09,5;UBERON:0006965,3.29e-09,5;UBERON:0002204,5.95e-09,32;UBERON:0001134,1.24e-08,9;UBERON:0002036,1.24e-08,9;UBERON:0002385,1.24e-08,9;UBERON:0000486,1.24e-08,9;UBERON:0007503,1.24e-08,9;UBERON:0001015,1.24e-08,9;UBERON:0002329,1.24e-08,9;UBERON:0003082,1.24e-08,9;UBERON:0003059,1.24e-08,9;UBERON:0007282,1.24e-08,9;UBERON:0004290,1.24e-08,9;UBERON:0009618,1.24e-08,9;UBERON:0000383,8.70e-08,10;UBERON:0007524,4.30e-07,11;UBERON:0003077,4.30e-07,11;UBERON:0007285,4.30e-07,11;UBERON:0001135,4.30e-07,3;UBERON:0004237,4.30e-07,3;UBERON:0004695,4.30e-07,3;UBERON:0002111,4.30e-07,3;UBERON:0004178,4.30e-07,3 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.811015449756117,1.28482726513177,0,0,0,0,0,0,0,0,0.336093799142464,4.88792928468299,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28527404665428,4.1564358058732,5.2175607966302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66088190564909,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,1.31796636956512,2.99951365496704,7.87835407853001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,9.83098462238529,5.40430604940902,18.4706274607135,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449724224769707,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,1.63171705145613,0,0,0,0,0.163934945376675,0,0,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0,0,0,0.228778173206523,0.849892149969277,1.6794174278839,2.76399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0.335769232728157,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.36499771816861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.811015449756117,1.28482726513177,0,0,0,0,0,0,0,0,0.336093799142464,4.88792928468299,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.28527404665428,4.1564358058732,5.2175607966302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66088190564909,0.148442139064825,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,1.31796636956512,2.99951365496704,7.87835407853001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,9.83098462238529,5.40430604940902,18.4706274607135,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449724224769707,0,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,1.63171705145613,0,0,0,0,0.163934945376675,0,0,0,0,0,0.445597348164788,0.283076530788832,0.404810701674894,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0,0,0,0.228778173206523,0.849892149969277,1.6794174278839,2.76399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0.335769232728157,0,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Il6 | |short_description=p1@Il6 | ||
}} | }} |
Latest revision as of 21:40, 25 September 2015
Short description: | p1@Il6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Il6_5end |
Coexpression cluster: | MCL_coexpression_mm9:554 |
Association with transcript: | -17bp_to_ENSMUST00000026845, NM_031168, uc008wuu.1, uc008wuv.1_5end |
EntrezGene: | Il6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.50e-17 | 7 |
barrier cell | 5.82e-16 | 3 |
muscle precursor cell | 7.63e-13 | 6 |
muscle cell | 7.63e-13 | 6 |
myoblast | 7.63e-13 | 6 |
common myeloid progenitor | 1.96e-12 | 19 |
granulocyte monocyte progenitor cell | 4.65e-12 | 7 |
insulating cell | 3.48e-11 | 2 |
myelin accumulating cell | 3.48e-11 | 2 |
Schwann cell | 3.48e-11 | 2 |
non-myelinating Schwann cell | 3.48e-11 | 2 |
myelinating Schwann cell;;Schwann cell | 3.48e-11 | 2 |
terminal Schwann cell | 3.48e-11 | 2 |
immature Schwann cell | 3.48e-11 | 2 |
Schwann cell precursor | 3.48e-11 | 2 |
multi-potent skeletal muscle stem cell | 1.24e-08 | 9 |
motile cell | 5.12e-08 | 54 |
stem cell | 6.21e-08 | 97 |
cardiocyte | 2.40e-07 | 3 |
striated muscle cell | 2.40e-07 | 3 |
cardiac muscle cell | 2.40e-07 | 3 |
cardiac muscle myoblast | 2.40e-07 | 3 |
smooth muscle cell | 4.30e-07 | 3 |
vascular associated smooth muscle cell | 4.30e-07 | 3 |
aortic smooth muscle cell | 4.30e-07 | 3 |
smooth muscle myoblast | 4.30e-07 | 3 |
hematopoietic cell | 4.40e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.40e-07 | 32 |
hematopoietic stem cell | 4.40e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.40e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vessel | 3.29e-09 | 5 |
epithelial tube open at both ends | 3.29e-09 | 5 |
blood vessel | 3.29e-09 | 5 |
vasculature | 3.29e-09 | 5 |
vascular system | 3.29e-09 | 5 |
blood vasculature | 3.29e-09 | 5 |
vascular cord | 3.29e-09 | 5 |
musculoskeletal system | 5.95e-09 | 32 |
skeletal muscle tissue | 1.24e-08 | 9 |
striated muscle tissue | 1.24e-08 | 9 |
muscle tissue | 1.24e-08 | 9 |
multilaminar epithelium | 1.24e-08 | 9 |
epithelial vesicle | 1.24e-08 | 9 |
musculature | 1.24e-08 | 9 |
somite | 1.24e-08 | 9 |
myotome | 1.24e-08 | 9 |
presomitic mesoderm | 1.24e-08 | 9 |
presumptive segmental plate | 1.24e-08 | 9 |
dermomyotome | 1.24e-08 | 9 |
trunk paraxial mesoderm | 1.24e-08 | 9 |
musculature of body | 8.70e-08 | 10 |
dense mesenchyme tissue | 4.30e-07 | 11 |
paraxial mesoderm | 4.30e-07 | 11 |
presumptive paraxial mesoderm | 4.30e-07 | 11 |
smooth muscle tissue | 4.30e-07 | 3 |
blood vessel smooth muscle | 4.30e-07 | 3 |
arterial system smooth muscle | 4.30e-07 | 3 |
artery smooth muscle tissue | 4.30e-07 | 3 |
aorta smooth muscle tissue | 4.30e-07 | 3 |