FFCP PHASE1:Hg19::chr2:163175609..163175631,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:163175609..163175631,+
|short_description=p6@GCA
|description=CAGE_peak_6_at_GCA_5end
|association_with_transcript=65bp_to_ENST00000429691_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25801 | |EntrezGene=25801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15990 | |HGNC=15990 | ||
|TSSclassifier=strong | |||
|UniProt=C9JV47 | |UniProt=C9JV47 | ||
|association_with_transcript=65bp_to_ENST00000429691_5end | |||
|cluster_id=chr2:163175609..163175631,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_GCA_5end | |||
|id=chr2:163175609..163175631,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.47e-55!140;CL:0000988!8.68e-46!182;CL:0000037!1.63e-45!172;CL:0000566!1.63e-45!172;CL:0002032!5.15e-42!165;CL:0000837!5.15e-42!165;CL:0002087!5.63e-42!119;CL:0002031!2.13e-41!124;CL:0000766!3.53e-25!76;CL:0002057!1.52e-23!42;CL:0000838!1.67e-21!52;CL:0000860!2.55e-21!45;CL:0000542!6.75e-21!53;CL:0000051!6.75e-21!53;CL:0000763!1.55e-20!112;CL:0000049!1.55e-20!112;CL:0002009!6.71e-20!65;CL:0000557!8.48e-20!71;CL:0002194!4.42e-18!63;CL:0000576!4.42e-18!63;CL:0000040!4.42e-18!63;CL:0000559!4.42e-18!63;CL:0000839!1.29e-17!70;CL:0000945!2.37e-15!24;CL:0000826!2.37e-15!24;CL:0000134!4.50e-13!358;CL:0002320!2.41e-12!365;CL:0000094!6.66e-10!8;CL:0000219!7.94e-10!390;CL:0000081!6.63e-09!11;CL:0000080!3.91e-08!6;CL:0000048!1.01e-07!430;CL:0000034!1.43e-07!444;CL:0000453!2.13e-07!5;CL:0000723!2.62e-07!436;CL:0000063!8.21e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.42e-30;33!CL:0002057;6.42e-30;33!CL:0000473;3.19e-22;39!CL:0000234;3.19e-22;39!CL:0000094;9.44e-20;8!CL:0000081;3.27e-19;11!CL:0000945;3.09e-16;24!CL:0002087;1.04e-14;104!CL:0000766;8.20e-14;69!CL:0000576;1.45e-12;48!CL:0000771;1.57e-10;2!CL:0000542;2.43e-10;53!CL:0000763;3.31e-09;100!CL:0000738;3.68e-09;136!CL:0000775;5.33e-07;3!CL:0000219;8.38e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.57e-46,136;CL:0002032,7.03e-38,161;CL:0000837,7.03e-38,161;CL:0000988,9.58e-38,177;CL:0000037,5.79e-36,168;CL:0002031,7.42e-35,120;CL:0002087,3.07e-34,115;CL:0000766,2.79e-27,72;CL:0000860,5.54e-24,42;CL:0002057,5.54e-24,42;CL:0000473,2.52e-23,48;CL:0000234,2.52e-23,48;CL:0000763,6.66e-20,108;CL:0000049,6.66e-20,108;CL:0000094,8.73e-20,8;CL:0002009,2.03e-19,61;CL:0000081,3.28e-19,11;CL:0002194,7.51e-18,59;CL:0000576,7.51e-18,59;CL:0000040,7.51e-18,59;CL:0000559,7.51e-18,59;CL:0000838,1.47e-17,52;CL:0000557,2.50e-17,67;CL:0000542,3.70e-17,53;CL:0000051,3.70e-17,53;CL:0000945,2.63e-16,24;CL:0000826,2.63e-16,24;CL:0000839,1.44e-15,66;CL:0000134,1.27e-13,354;CL:0002320,3.44e-13,361;CL:0000219,1.14e-11,386;CL:0000771,1.53e-10,2;CL:0000048,8.29e-10,427;CL:0000723,1.50e-09,433;CL:0000034,3.22e-09,441;CL:0000775,5.66e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.61e-16;42!CL:0000051;2.43e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.30e-23!102;UBERON:0003061!6.30e-23!102;UBERON:0002193!1.81e-20!112;UBERON:0002371!1.38e-18!80;UBERON:0001474!1.91e-16!86;UBERON:0002405!1.31e-14!115;UBERON:0004765!4.69e-13!101;UBERON:0001434!4.69e-13!101;UBERON:0002384!7.90e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.31e-15,76;UBERON:0001474,1.97e-13,82;UBERON:0002390,1.97e-13,98;UBERON:0003061,1.97e-13,98;UBERON:0002384,1.33e-12,371;UBERON:0004765,6.92e-12,90;UBERON:0002193,8.94e-12,108;UBERON:0002405,2.24e-11,93;UBERON:0001434,2.65e-10,100 | |||
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| ||
|short_description=p6@GCA | |||
}} | }} |
Latest revision as of 21:54, 17 September 2015
Short description: | p6@GCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GCA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 65bp_to_ENST00000429691_5end |
EntrezGene: | GCA |
HGNC: | 15990 |
UniProt: | C9JV47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.31e-15 | 76 |
bone element | 1.97e-13 | 82 |
hematopoietic system | 1.97e-13 | 98 |
blood island | 1.97e-13 | 98 |
connective tissue | 1.33e-12 | 371 |
skeletal element | 6.92e-12 | 90 |
hemolymphoid system | 8.94e-12 | 108 |
immune system | 2.24e-11 | 93 |
skeletal system | 2.65e-10 | 100 |