FFCP PHASE1:Hg19::chr2:216713591..216713606,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:216713591..216713606,-
|short_description=p@chr2:216713591..216713606,-
|description=CAGE_peak_at_chr2:216713591..216713606,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:216713591..216713606,- | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr2:216713591..216713606,- | |||
|id=chr2:216713591..216713606,- | |||
|ontology_enrichment_celltype=CL:0002139!1.80e-47!24;CL:0000115!4.88e-40!35;CL:0000071!3.69e-34!18;CL:0002546!3.69e-34!18;CL:0002078!3.22e-30!44;CL:1000413!6.39e-23!9;CL:0000213!1.47e-21!57;CL:0000215!1.47e-21!57;CL:0002544!8.90e-16!6;CL:0002543!9.82e-16!6;CL:0005020!7.49e-15!6;CL:0002138!7.49e-15!6;CL:0005022!7.49e-15!6;CL:0000222!1.11e-13!119;CL:0002618!1.02e-08!3;CL:0000076!9.89e-08!62;CL:0002615!1.41e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.01e-83;24!CL:0000115;2.86e-69;36!CL:0000071;4.70e-63;18!CL:1000413;1.65e-46;9!CL:0002078;1.63e-36;45!CL:0002544;1.97e-31;6!CL:0002543;2.69e-31;6!CL:0000213;1.05e-29;58!CL:0000215;1.05e-29;58!CL:0002138;3.41e-21;6!CL:0002618;1.49e-16;3!CL:0002545;1.84e-11;2!CL:0000076;8.47e-11;63!CL:0002188;9.67e-10;5!CL:0000515;1.71e-07;3!CL:1000746;4.44e-07;7!CL:1000612;4.44e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.96e-83,24;CL:0000115,5.03e-78,36;CL:0000071,5.14e-63,18;CL:0002546,5.14e-63,18;CL:0002078,2.47e-61,45;CL:1000413,1.83e-46,9;CL:0000213,2.30e-46,58;CL:0000215,2.30e-46,58;CL:0002544,2.19e-31,6;CL:0002543,2.69e-31,6;CL:0000222,2.22e-27,121;CL:0005020,4.31e-21,6;CL:0002138,4.31e-21,6;CL:0005022,4.31e-21,6;CL:0002618,1.49e-16,3;CL:0000076,1.41e-15,63;CL:0002545,1.99e-11,2;CL:0002321,5.81e-10,250;CL:0002188,9.39e-10,5;CL:0000066,4.24e-08,253;CL:1000746,4.35e-07,7;CL:1000612,4.35e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;4.70e-63;18!CL:0005022;3.41e-21;6!CL:0000222;1.21e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.69e-34!18;UBERON:0004638!3.69e-34!18;UBERON:0004852!3.69e-34!18;UBERON:0000487!4.68e-27!22;UBERON:0000055!1.71e-24!69;UBERON:0002049!2.88e-23!79;UBERON:0007798!2.88e-23!79;UBERON:0006914!3.15e-23!25;UBERON:0003915!6.39e-23!9;UBERON:0004700!6.39e-23!9;UBERON:0001917!6.39e-23!9;UBERON:0001009!3.90e-18!113;UBERON:0004535!1.22e-17!110;UBERON:0001981!1.49e-17!60;UBERON:0007500!1.49e-17!60;UBERON:0004537!1.49e-17!60;UBERON:0006965!1.49e-17!60;UBERON:0004872!4.66e-14!84;UBERON:0003914!1.52e-12!118;UBERON:0004111!1.95e-11!241;UBERON:0001637!4.49e-11!42;UBERON:0003509!4.49e-11!42;UBERON:0004572!4.49e-11!42;UBERON:0001473!6.49e-11!8;UBERON:0004536!6.49e-11!8;UBERON:0006558!6.49e-11!8;UBERON:0000025!2.93e-10!194;UBERON:0001638!3.63e-10!9;UBERON:0003920!3.63e-10!9;UBERON:0004582!3.63e-10!9;UBERON:0003688!4.99e-09!6;UBERON:0002358!4.99e-09!6;UBERON:0003684!4.99e-09!6;UBERON:0001178!4.99e-09!6;UBERON:0000477!8.11e-09!286;UBERON:0002465!1.49e-08!10;UBERON:0000483!3.70e-08!309;UBERON:0000119!5.83e-08!312;UBERON:0000947!5.91e-08!21;UBERON:0010191!5.91e-08!21;UBERON:0000490!4.01e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.70e-63;18!UBERON:0001986;4.70e-63;18!UBERON:0004852;4.70e-63;18!UBERON:0000487;5.66e-51;22!UBERON:0003915;1.65e-46;9!UBERON:0004700;1.65e-46;9!UBERON:0001917;1.65e-46;9!UBERON:0006914;1.90e-44;25!UBERON:0000490;6.21e-34;33!UBERON:0001638;1.11e-20;9!UBERON:0003920;1.11e-20;9!UBERON:0004582;1.11e-20;9!UBERON:0000055;1.70e-19;65!UBERON:0001473;7.60e-16;8!UBERON:0004536;7.60e-16;8!UBERON:0006558;7.60e-16;8!UBERON:0007500;1.02e-15;56!UBERON:0001981;1.02e-15;56!UBERON:0004537;1.02e-15;56!UBERON:0002049;4.62e-14;75!UBERON:0007798;4.62e-14;75!UBERON:0002465;1.25e-12;10!UBERON:0003914;7.58e-12;74!UBERON:0005800;1.84e-11;2!UBERON:0001515;1.84e-11;2!UBERON:0001637;2.47e-11;42!UBERON:0003509;2.47e-11;42!UBERON:0004572;2.47e-11;42!UBERON:0005406;1.66e-10;2!UBERON:0002066;4.02e-10;5!UBERON:0004535;9.07e-10;109!UBERON:0010260;1.90e-09;9!UBERON:0000025;4.23e-09;93!UBERON:0001009;1.00e-08;112!UBERON:0000947;1.53e-08;21!UBERON:0010191;1.53e-08;21!UBERON:0004111;3.56e-07;130!UBERON:0000074;4.44e-07;7!UBERON:0001229;4.44e-07;7!UBERON:0004573;7.19e-07;33!UBERON:0004571;7.19e-07;33!UBERON:0000483;8.25e-07;136 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.14e-63,18;UBERON:0001986,5.14e-63,18;UBERON:0004852,5.14e-63,18;UBERON:0000487,6.09e-51,22;UBERON:0003915,1.83e-46,9;UBERON:0004700,1.83e-46,9;UBERON:0001917,1.83e-46,9;UBERON:0006914,2.02e-44,25;UBERON:0000055,3.28e-35,68;UBERON:0002049,5.07e-30,78;UBERON:0007798,5.07e-30,78;UBERON:0007500,1.32e-24,59;UBERON:0001981,1.32e-24,59;UBERON:0004537,1.32e-24,59;UBERON:0006965,1.32e-24,59;UBERON:0004535,5.24e-24,109;UBERON:0001009,3.26e-23,112;UBERON:0001638,1.11e-20,9;UBERON:0003920,1.11e-20,9;UBERON:0004582,1.11e-20,9;UBERON:0004872,2.10e-20,83;UBERON:0003914,5.96e-20,117;UBERON:0001473,9.02e-16,8;UBERON:0004536,9.02e-16,8;UBERON:0006558,9.02e-16,8;UBERON:0000490,3.20e-13,148;UBERON:0001637,6.77e-13,42;UBERON:0003509,6.77e-13,42;UBERON:0004572,6.77e-13,42;UBERON:0002465,1.43e-12,10;UBERON:0004111,1.12e-11,240;UBERON:0005800,1.99e-11,2;UBERON:0001515,1.99e-11,2;UBERON:0005406,1.30e-10,2;UBERON:0002066,4.02e-10,5;UBERON:0000025,5.42e-10,192;UBERON:0010260,1.80e-09,9;UBERON:0000947,1.58e-08,21;UBERON:0010191,1.58e-08,21;UBERON:0003081,3.05e-08,203;UBERON:0000483,9.27e-08,306;UBERON:0000119,1.26e-07,309;UBERON:0010532,4.35e-07,7;UBERON:0000074,4.35e-07,7;UBERON:0001229,4.35e-07,7;UBERON:0001230,4.35e-07,7;UBERON:0003220,4.35e-07,7;UBERON:0005749,4.35e-07,7;UBERON:0004199,4.35e-07,7;UBERON:0004209,4.35e-07,7;UBERON:0004198,4.35e-07,7;UBERON:0004573,7.70e-07,33;UBERON:0004571,7.70e-07,33 | |||
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| ||
|short_description=p@chr2:216713591..216713606,- | |||
}} | }} |
Latest revision as of 06:21, 29 July 2015
Short description: | p@chr2:216713591..216713606, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:216713591..216713606, - |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.96e-83 | 24 |
endothelial cell | 5.03e-78 | 36 |
blood vessel endothelial cell | 5.14e-63 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.14e-63 | 18 |
meso-epithelial cell | 2.47e-61 | 45 |
endothelial cell of artery | 1.83e-46 | 9 |
lining cell | 2.30e-46 | 58 |
barrier cell | 2.30e-46 | 58 |
aortic endothelial cell | 2.19e-31 | 6 |
vein endothelial cell | 2.69e-31 | 6 |
mesodermal cell | 2.22e-27 | 121 |
lymphangioblast | 4.31e-21 | 6 |
endothelial cell of lymphatic vessel | 4.31e-21 | 6 |
vascular lymphangioblast | 4.31e-21 | 6 |
endothelial cell of umbilical vein | 1.49e-16 | 3 |
squamous epithelial cell | 1.41e-15 | 63 |
thoracic aorta endothelial cell | 1.99e-11 | 2 |
embryonic cell | 5.81e-10 | 250 |
glomerular endothelial cell | 9.39e-10 | 5 |
epithelial cell | 4.24e-08 | 253 |
glomerular cell | 4.35e-07 | 7 |
kidney corpuscule cell | 4.35e-07 | 7 |