Personal tools

FFCP PHASE1:Mm9::chr5:24348806..24348819,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=2571
|MCL_coexpression_id=2571
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr5:24348806..24348819,+
|description=CAGE_peak_at_chr5:24348806..24348819,+
|description=CAGE_peak_at_chr5:24348806..24348819,+
|id=chr5:24348806..24348819,+
|id=chr5:24348806..24348819,+
|ontology_enrichment_celltype=CL:0000542!1.16e-08!13;CL:0000051!1.16e-08!13;CL:0000838!1.35e-08!12;CL:0000063!3.89e-08!66;CL:0000084!6.09e-08!11;CL:0000827!6.09e-08!11;CL:0002563!8.35e-08!9;CL:0002251!8.35e-08!9;CL:0000791!8.95e-07!9;CL:0000789!8.95e-07!9;CL:0002420!8.95e-07!9;CL:0002419!8.95e-07!9;CL:0000790!8.95e-07!9
|ontology_enrichment_celltype=CL:0000542!1.16e-08!13;CL:0000051!1.16e-08!13;CL:0000838!1.35e-08!12;CL:0000063!3.89e-08!66;CL:0000084!6.09e-08!11;CL:0000827!6.09e-08!11;CL:0002563!8.35e-08!9;CL:0002251!8.35e-08!9;CL:0000791!8.95e-07!9;CL:0000789!8.95e-07!9;CL:0002420!8.95e-07!9;CL:0002419!8.95e-07!9;CL:0000790!8.95e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,5.61e-21,12;CL:0000084,3.55e-19,11;CL:0000827,3.55e-19,11;CL:0000542,3.84e-19,13;CL:0000051,3.84e-19,13;CL:0002563,8.48e-19,9;CL:0002251,8.48e-19,9;CL:0000066,7.88e-18,25;CL:0000791,5.77e-16,9;CL:0000789,5.77e-16,9;CL:0002420,5.77e-16,9;CL:0002419,5.77e-16,9;CL:0000790,5.77e-16,9;CL:0000624,8.84e-15,8;CL:0000075,9.12e-15,7;CL:0000738,5.74e-14,17;CL:0002087,5.74e-14,17;CL:0000239,5.96e-13,6;CL:0000677,5.96e-13,6;CL:0000584,5.96e-13,6;CL:0002031,6.86e-12,25;CL:0000988,1.10e-11,32;CL:0002032,1.10e-11,32;CL:0000037,1.10e-11,32;CL:0000837,1.10e-11,32;CL:0000893,1.27e-11,6;CL:0002489,1.27e-11,6;CL:0000898,1.27e-11,6;CL:0000809,1.27e-11,6;CL:0000810,1.27e-11,6;CL:0000895,1.27e-11,6;CL:0000808,1.27e-11,6;CL:0000894,1.27e-11,6;CL:0000806,1.27e-11,6;CL:0000807,1.27e-11,6;CL:0000805,1.27e-11,6;CL:0002425,1.27e-11,6;CL:0002436,1.27e-11,6;CL:0002427,1.27e-11,6;CL:0002428,1.27e-11,6;CL:0002429,1.27e-11,6;CL:0002433,1.27e-11,6;CL:0002431,1.27e-11,6;CL:0002432,1.27e-11,6;CL:0000223,5.88e-11,20;CL:0002076,1.90e-10,15;CL:0002320,2.64e-09,46;CL:0000134,2.64e-09,46;CL:0000723,6.65e-09,91;CL:0000048,6.65e-09,91;CL:0000034,7.89e-09,97;CL:0002250,2.03e-07,3;CL:0000219,2.66e-07,54
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000485!5.16e-09!11;UBERON:0003350!8.35e-08!9;UBERON:0004808!8.35e-08!9;UBERON:0001277!8.35e-08!9
|ontology_enrichment_uberon=UBERON:0000485!5.16e-09!11;UBERON:0003350!8.35e-08!9;UBERON:0004808!8.35e-08!9;UBERON:0001277!8.35e-08!9
|ontology_enrichment_uberon_v019_2=UBERON:0000485,3.93e-22,11;UBERON:0003350,8.48e-19,9;UBERON:0004808,8.48e-19,9;UBERON:0001277,8.48e-19,9;UBERON:0001242,2.27e-12,13;UBERON:0001262,2.27e-12,13;UBERON:0004786,2.27e-12,13;UBERON:0000490,6.91e-12,66;UBERON:0000344,1.90e-10,15;UBERON:0003929,5.10e-10,55;UBERON:0002384,2.64e-09,46;UBERON:0005911,5.43e-07,69
|phase1_expression=1.60148847104794,4.53668029931169,2.27499619694768,11.4936400296595,16.5295590882295,3.18970616632591,4.43864017131499,1.29123323441576,13.938083493015,16.1504523162175,2.73948749160808,2.15384829287408,1.02720437958723,1.31130603628496,0.666219523631325,0.202475267389826,0,0,0.274228867211478,0.42438965179803,0,1.48936426801328,2.35079810225042,0,0,1.72269589234506,1.7230479846363,1.939241094173,0,0,0.443461021310609,1.90509202037889,1.23012957516914,0,8.66554859253824,3.15845826181135,12.2501613757421,1.25559489221072,4.6880120671428,0,4.70585190424811,0.683045484958446,0.485510353031154,0.251793635951155,0.405507724878058,0,0,0.218025156380447,0,0.194429899074283,0,0,2.85230430298152,2.90144856804538,1.00828139742739,0,0,0.515672092277442,0.404632921719196,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.489963196859816,0.191690942036473,0,0,0.255374676170375,0.614426133024974,0,0.457438218012048,0,0.837548997004143,0,0.763991238884051,0.589257170947335,0.142371680799103,1.1183966749518,0.075726193333184,0,6.08715426273523,0,1.3599426674155,0,0,0.448026887097336,0.140444420131752,0,0,0,2.95771181531029,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0.29688427812965,0.520455980298408,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0,0.220841518460394,1.93950101254089,0,0.585561594023094,0.41889341362691,0.255457055208591,0.718890747035522,2.39961092397363,0.889491589511453,0.449371918214468,0,0.376963056338593,0.347648640384553,0,0.20778804455956,0.486723789203273,0,0.746441823660558,0.758168275301024,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0.189106080167819,0,0,1.11218899690239,0,0,0.398068533636986,2.1066395619397,0.51469581422943,0,0,0,0.36012412292203,0.23674473558521,0,0.462801338662135,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.308713837137853,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.948339504765408,0,0,0,0.775809948670503,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.144649058581512,0,0,1.47529281905711,0.551873492609465,0.160550589987792,0.586058432961016,0.163934945376675,0,0.315508219416257,0,1.07711698866399,0.238968797952552,1.11399337041197,0.283076530788832,0,0.584511715822624,0.395287777946524,0,0,0,0,0.164970122972535,0,0.728341908464944,0,0,0,0.614870295887855,0,0.363533729477506,0,0.632073515871632,0,0,2.38307724027652,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0.854354403989263,0,0,0,0.27338845544205,0.915112692826091,0.679913719975421,2.09927178485487,0.414599921413271,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0.330916980914195,0.777804753376191,0.904118764344118,0.675824501963113,0.469428954583016,0.2604087696879,0.209718688851422,1.93267296660805,0.288030006257865,0.948033361884535,0,0.410843828659309,0.25984164595559,1.43221356533985,1.19208812868759,0.240390899039938,0.443068581523732,0.504832249740738,0.381034033274999,0.302478555410522,0.194915761479505,0.481059208201647,0.701261413089414,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0.906284817968409,1.03552062350364,0.726511433089237,0.399024873401031,0.170733605754134,0.729320151204882,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0,0,0.197008964751127,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421
|phase1_expression=1.60148847104794,4.53668029931169,2.27499619694768,11.4936400296595,16.5295590882295,3.18970616632591,4.43864017131499,1.29123323441576,13.938083493015,16.1504523162175,2.73948749160808,2.15384829287408,1.02720437958723,1.31130603628496,0.666219523631325,0.202475267389826,0,0,0.274228867211478,0.42438965179803,0,1.48936426801328,2.35079810225042,0,0,1.72269589234506,1.7230479846363,1.939241094173,0,0,0.443461021310609,1.90509202037889,1.23012957516914,0,8.66554859253824,3.15845826181135,12.2501613757421,1.25559489221072,4.6880120671428,0,4.70585190424811,0.683045484958446,0.485510353031154,0.251793635951155,0.405507724878058,0,0,0.218025156380447,0,0.194429899074283,0,0,2.85230430298152,2.90144856804538,1.00828139742739,0,0,0.515672092277442,0.404632921719196,0,0,0.677689064138264,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.489963196859816,0.191690942036473,0,0,0.255374676170375,0.614426133024974,0,0.457438218012048,0,0.837548997004143,0,0.763991238884051,0.589257170947335,0.142371680799103,1.1183966749518,0.075726193333184,0,6.08715426273523,0,1.3599426674155,0,0,0.448026887097336,0.140444420131752,0,0,0,2.95771181531029,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0.29688427812965,0.520455980298408,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0,0.220841518460394,1.93950101254089,0,0.585561594023094,0.41889341362691,0.255457055208591,0.718890747035522,2.39961092397363,0.889491589511453,0.449371918214468,0,0.376963056338593,0.347648640384553,0,0.20778804455956,0.486723789203273,0,0.746441823660558,0.758168275301024,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0.189106080167819,0,0,1.11218899690239,0,0,0.398068533636986,2.1066395619397,0.51469581422943,0,0,0,0.36012412292203,0.23674473558521,0,0.462801338662135,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.134206418760372,0.420579897128254,0.308713837137853,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.948339504765408,0,0,0,0.775809948670503,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.144649058581512,0,0,1.47529281905711,0.551873492609465,0.160550589987792,0.586058432961016,0.163934945376675,0,0.315508219416257,0,1.07711698866399,0.238968797952552,1.11399337041197,0.283076530788832,0,0.584511715822624,0.395287777946524,0,0,0,0,0.164970122972535,0,0.728341908464944,0,0,0,0.614870295887855,0,0.363533729477506,0,0.632073515871632,0,0,2.38307724027652,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0.854354403989263,0,0,0,0.27338845544205,0.915112692826091,0.679913719975421,2.09927178485487,0.414599921413271,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0.330916980914195,0.777804753376191,0.904118764344118,0.675824501963113,0.469428954583016,0.2604087696879,0.209718688851422,1.93267296660805,0.288030006257865,0.948033361884535,0,0.410843828659309,0.25984164595559,1.43221356533985,1.19208812868759,0.240390899039938,0.443068581523732,0.504832249740738,0.381034033274999,0.302478555410522,0.194915761479505,0.481059208201647,0.701261413089414,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0.906284817968409,1.03552062350364,0.726511433089237,0.399024873401031,0.170733605754134,0.729320151204882,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0,0,0,0,0.197008964751127,0,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0.231867835620421
|short_description=p@chr5:24348806..24348819,+
|short_description=p@chr5:24348806..24348819,+
}}
}}

Latest revision as of 05:26, 4 August 2015

Short description:p@chr5:24348806..24348819, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr5:24348806..24348819, +
Coexpression cluster:MCL_coexpression_mm9:2571
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr5:24348806..24348819+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.49
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell5.61e-2112
T cell3.55e-1911
pro-T cell3.55e-1911
lymphocyte3.84e-1913
common lymphoid progenitor3.84e-1913
intestinal epithelial cell8.48e-199
epithelial cell of alimentary canal8.48e-199
epithelial cell7.88e-1825
mature alpha-beta T cell5.77e-169
alpha-beta T cell5.77e-169
immature T cell5.77e-169
mature T cell5.77e-169
immature alpha-beta T cell5.77e-169
CD4-positive, alpha-beta T cell8.84e-158
columnar/cuboidal epithelial cell9.12e-157
leukocyte5.74e-1417
nongranular leukocyte5.74e-1417
brush border epithelial cell5.96e-136
gut absorptive cell5.96e-136
enterocyte5.96e-136
hematopoietic lineage restricted progenitor cell6.86e-1225
hematopoietic cell1.10e-1132
hematopoietic oligopotent progenitor cell1.10e-1132
hematopoietic stem cell1.10e-1132
hematopoietic multipotent progenitor cell1.10e-1132
thymocyte1.27e-116
double negative thymocyte1.27e-116
naive T cell1.27e-116
double-positive, alpha-beta thymocyte1.27e-116
CD4-positive, alpha-beta thymocyte1.27e-116
naive thymus-derived CD4-positive, alpha-beta T cell1.27e-116
DN4 thymocyte1.27e-116
DN1 thymic pro-T cell1.27e-116
DN2 thymocyte1.27e-116
DN3 thymocyte1.27e-116
immature single positive thymocyte1.27e-116
early T lineage precursor1.27e-116
mature CD4 single-positive thymocyte1.27e-116
resting double-positive thymocyte1.27e-116
double-positive blast1.27e-116
CD69-positive double-positive thymocyte1.27e-116
CD69-positive, CD4-positive single-positive thymocyte1.27e-116
CD4-positive, CD8-intermediate double-positive thymocyte1.27e-116
CD24-positive, CD4 single-positive thymocyte1.27e-116
endodermal cell5.88e-1120
endo-epithelial cell1.90e-1015
connective tissue cell2.64e-0946
mesenchymal cell2.64e-0946
somatic stem cell6.65e-0991
multi fate stem cell6.65e-0991
stem cell7.89e-0997
intestinal crypt stem cell2.03e-073
motile cell2.66e-0754
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:24348806..24348819,%2B&oldid=3741261"