FFCP PHASE1:Mm9::chrX:33428680..33428704,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75974 | |EntrezGene=75974 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=894 | |MCL_coexpression_id=894 | ||
|TSSclassifier=NA | |||
|UniProt=A2AF47 | |UniProt=A2AF47 | ||
|association_with_transcript=-122bp_to_ENSMUST00000033419,NM_001009947,uc009sxi.1_5end | |association_with_transcript=-122bp_to_ENSMUST00000033419,NM_001009947,uc009sxi.1_5end | ||
|cluster_id=chrX:33428680..33428704,+ | |||
|description=CAGE_peak_3_at_Dock11_5end | |description=CAGE_peak_3_at_Dock11_5end | ||
|id=chrX:33428680..33428704,+ | |id=chrX:33428680..33428704,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.47e-08!13;CL:0000051!1.47e-08!13;CL:0000838!1.74e-08!12;CL:0000084!7.40e-08!11;CL:0000827!7.40e-08!11;CL:0000791!4.19e-07!9;CL:0000789!4.19e-07!9;CL:0002420!4.19e-07!9;CL:0002419!4.19e-07!9;CL:0000790!4.19e-07!9;CL:0000988!7.15e-07!32;CL:0002032!7.15e-07!32;CL:0000037!7.15e-07!32;CL:0000566!7.15e-07!32;CL:0000837!7.15e-07!32 | |ontology_enrichment_celltype=CL:0000542!1.47e-08!13;CL:0000051!1.47e-08!13;CL:0000838!1.74e-08!12;CL:0000084!7.40e-08!11;CL:0000827!7.40e-08!11;CL:0000791!4.19e-07!9;CL:0000789!4.19e-07!9;CL:0002420!4.19e-07!9;CL:0002419!4.19e-07!9;CL:0000790!4.19e-07!9;CL:0000988!7.15e-07!32;CL:0002032!7.15e-07!32;CL:0000037!7.15e-07!32;CL:0000566!7.15e-07!32;CL:0000837!7.15e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.07e-09,13;CL:0000051,6.07e-09,13;CL:0000838,7.24e-09,12;CL:0000084,3.34e-08,11;CL:0000827,3.34e-08,11;CL:0000988,5.07e-08,32;CL:0002032,5.07e-08,32;CL:0000037,5.07e-08,32;CL:0000837,5.07e-08,32;CL:0000791,2.07e-07,9;CL:0000789,2.07e-07,9;CL:0002420,2.07e-07,9;CL:0002419,2.07e-07,9;CL:0000790,2.07e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.12e-10!29;UBERON:0002193!9.15e-09!48;UBERON:0002390!2.47e-08!45;UBERON:0003061!2.47e-08!45;UBERON:0002370!1.90e-07!23;UBERON:0000974!1.90e-07!23;UBERON:0004807!1.90e-07!23;UBERON:0005058!1.90e-07!23;UBERON:0003351!1.90e-07!23;UBERON:0009113!1.90e-07!23;UBERON:0003295!1.90e-07!23;UBERON:0009722!1.90e-07!23;UBERON:0005562!1.90e-07!23;UBERON:0007690!1.90e-07!23;UBERON:0006562!3.16e-07!24;UBERON:0001557!3.16e-07!24;UBERON:0001042!3.16e-07!24;UBERON:0008814!3.16e-07!24;UBERON:0009145!3.16e-07!24 | |ontology_enrichment_uberon=UBERON:0004177!7.12e-10!29;UBERON:0002193!9.15e-09!48;UBERON:0002390!2.47e-08!45;UBERON:0003061!2.47e-08!45;UBERON:0002370!1.90e-07!23;UBERON:0000974!1.90e-07!23;UBERON:0004807!1.90e-07!23;UBERON:0005058!1.90e-07!23;UBERON:0003351!1.90e-07!23;UBERON:0009113!1.90e-07!23;UBERON:0003295!1.90e-07!23;UBERON:0009722!1.90e-07!23;UBERON:0005562!1.90e-07!23;UBERON:0007690!1.90e-07!23;UBERON:0006562!3.16e-07!24;UBERON:0001557!3.16e-07!24;UBERON:0001042!3.16e-07!24;UBERON:0008814!3.16e-07!24;UBERON:0009145!3.16e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.36e-11,29;UBERON:0005057,8.36e-11,29;UBERON:0002193,5.27e-10,48;UBERON:0002405,5.27e-10,48;UBERON:0002390,1.50e-09,45;UBERON:0003061,1.50e-09,45;UBERON:0002370,3.19e-08,23;UBERON:0000974,3.19e-08,23;UBERON:0004807,3.19e-08,23;UBERON:0005058,3.19e-08,23;UBERON:0003351,3.19e-08,23;UBERON:0009113,3.19e-08,23;UBERON:0003295,3.19e-08,23;UBERON:0009722,3.19e-08,23;UBERON:0005562,3.19e-08,23;UBERON:0007690,3.19e-08,23;UBERON:0006562,5.70e-08,24;UBERON:0001557,5.70e-08,24;UBERON:0001042,5.70e-08,24;UBERON:0008814,5.70e-08,24;UBERON:0009145,5.70e-08,24;UBERON:0000077,6.15e-08,35;UBERON:0003408,2.00e-07,24;UBERON:0000072,9.24e-07,27 | |||
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| ||
|short_description=p3@Dock11 | |short_description=p3@Dock11 | ||
}} | }} |
Latest revision as of 19:53, 1 October 2015
Short description: | p3@Dock11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dock11_5end |
Coexpression cluster: | MCL_coexpression_mm9:894 |
Association with transcript: | -122bp_to_ENSMUST00000033419, NM_001009947, uc009sxi.1_5end |
EntrezGene: | Dock11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.07e-09 | 13 |
common lymphoid progenitor | 6.07e-09 | 13 |
lymphoid lineage restricted progenitor cell | 7.24e-09 | 12 |
T cell | 3.34e-08 | 11 |
pro-T cell | 3.34e-08 | 11 |
hematopoietic cell | 5.07e-08 | 32 |
hematopoietic oligopotent progenitor cell | 5.07e-08 | 32 |
hematopoietic stem cell | 5.07e-08 | 32 |
hematopoietic multipotent progenitor cell | 5.07e-08 | 32 |
mature alpha-beta T cell | 2.07e-07 | 9 |
alpha-beta T cell | 2.07e-07 | 9 |
immature T cell | 2.07e-07 | 9 |
mature T cell | 2.07e-07 | 9 |
immature alpha-beta T cell | 2.07e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.36e-11 | 29 |
immune organ | 8.36e-11 | 29 |
hemolymphoid system | 5.27e-10 | 48 |
immune system | 5.27e-10 | 48 |
hematopoietic system | 1.50e-09 | 45 |
blood island | 1.50e-09 | 45 |
thymus | 3.19e-08 | 23 |
neck | 3.19e-08 | 23 |
respiratory system epithelium | 3.19e-08 | 23 |
hemolymphoid system gland | 3.19e-08 | 23 |
pharyngeal epithelium | 3.19e-08 | 23 |
thymic region | 3.19e-08 | 23 |
pharyngeal gland | 3.19e-08 | 23 |
entire pharyngeal arch endoderm | 3.19e-08 | 23 |
thymus primordium | 3.19e-08 | 23 |
early pharyngeal endoderm | 3.19e-08 | 23 |
pharynx | 5.70e-08 | 24 |
upper respiratory tract | 5.70e-08 | 24 |
chordate pharynx | 5.70e-08 | 24 |
pharyngeal arch system | 5.70e-08 | 24 |
pharyngeal region of foregut | 5.70e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 6.15e-08 | 35 |
gland of gut | 2.00e-07 | 24 |
segment of respiratory tract | 9.24e-07 | 27 |