FFCP PHASE1:Hg19::chr3:100238013..100238111,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:100238013..100238111,+
|short_description=p3@TMEM45A
|description=CAGE_peak_3_at_TMEM45A_5end
|association_with_transcript=0bp_to_ENST00000462884,uc003dua....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55076 | |EntrezGene=55076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25480 | |HGNC=25480 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462884,uc003dua.1_5end | |||
|cluster_id=chr3:100238013..100238111,+ | |||
|coexpression_cluster_id=C1369 | |||
|description=CAGE_peak_3_at_TMEM45A_5end | |||
|id=chr3:100238013..100238111,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.40e-12!42;CL:0000860!4.99e-11!45;CL:0002009!4.63e-09!65;CL:0000557!2.45e-08!71;CL:0002194!6.13e-08!63;CL:0000576!6.13e-08!63;CL:0000040!6.13e-08!63;CL:0000559!6.13e-08!63;CL:0000766!2.97e-07!76;CL:0000839!4.81e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.55e-13;33!CL:0002057;8.55e-13;33!CL:0000622;1.52e-09;5!CL:0000473;2.02e-08;39!CL:0000234;2.02e-08;39!CL:0000154;7.42e-08;6!CL:0000150;2.89e-07;9!CL:0002623;9.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.98e-09,5;CL:0000860,2.03e-09,42;CL:0002057,2.03e-09,42;CL:0002009,3.20e-09,61;CL:0000557,6.96e-08,67;CL:0000154,9.20e-08,6;CL:0000473,1.16e-07,48;CL:0000234,1.16e-07,48;CL:0002194,1.37e-07,59;CL:0000576,1.37e-07,59;CL:0000040,1.37e-07,59;CL:0000559,1.37e-07,59;CL:0000150,3.42e-07,9;CL:0002623,9.45e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.98e-08!14;UBERON:0000158!1.98e-08!14;UBERON:0002371!8.73e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.61e-09;10!UBERON:0000158;6.61e-09;10!UBERON:0001013;7.75e-09;14!UBERON:0000478;2.77e-07;24!UBERON:0000305;9.66e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.28e-12,14;UBERON:0000158,7.28e-12,14;UBERON:0001013,7.86e-09,14;UBERON:0000478,2.44e-07,24;UBERON:0002371,4.98e-07,76;UBERON:0000305,8.61e-07,7 | |||
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| ||
|short_description=p3@TMEM45A | |||
}} | }} |
Latest revision as of 05:13, 19 September 2015
Short description: | p3@TMEM45A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM45A_5end |
Coexpression cluster: | C1369_amniotic_immature_skin_salivary_chorionic_tongue_esophagus |
Association with transcript: | 0bp_to_ENST00000462884, uc003dua.1_5end |
EntrezGene: | TMEM45A |
HGNC: | 25480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.98e-09 | 5 |
classical monocyte | 2.03e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-09 | 42 |
macrophage dendritic cell progenitor | 3.20e-09 | 61 |
granulocyte monocyte progenitor cell | 6.96e-08 | 67 |
protein secreting cell | 9.20e-08 | 6 |
defensive cell | 1.16e-07 | 48 |
phagocyte | 1.16e-07 | 48 |
monopoietic cell | 1.37e-07 | 59 |
monocyte | 1.37e-07 | 59 |
monoblast | 1.37e-07 | 59 |
promonocyte | 1.37e-07 | 59 |
glandular epithelial cell | 3.42e-07 | 9 |
acinar cell of salivary gland | 9.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.28e-12 | 14 |
membranous layer | 7.28e-12 | 14 |
adipose tissue | 7.86e-09 | 14 |
extraembryonic structure | 2.44e-07 | 24 |
bone marrow | 4.98e-07 | 76 |
amnion | 8.61e-07 | 7 |