FFCP PHASE1:Hg19::chr3:12329397..12329433,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:12329397..12329433,+
|short_description=p2@PPARG
|description=CAGE_peak_2_at_PPARG_5end
|association_with_transcript=0bp_to_ENST00000397015_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5468 | |EntrezGene=5468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9236 | |HGNC=9236 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000397015_5end | |||
|cluster_id=chr3:12329397..12329433,+ | |||
|coexpression_cluster_id=C2220 | |||
|description=CAGE_peak_2_at_PPARG_5end | |||
|id=chr3:12329397..12329433,+ | |||
|ontology_enrichment_celltype=CL:0000860!5.38e-14!45;CL:0002057!2.93e-13!42;CL:0002194!6.88e-13!63;CL:0000576!6.88e-13!63;CL:0000040!6.88e-13!63;CL:0000559!6.88e-13!63;CL:0002009!7.76e-12!65;CL:0000839!1.63e-09!70;CL:0000557!3.29e-09!71;CL:0000766!6.71e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.68e-17;33!CL:0002057;6.68e-17;33!CL:0000473;2.38e-15;39!CL:0000234;2.38e-15;39!CL:0000576;1.91e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.77e-15,48;CL:0000234,2.77e-15,48;CL:0000860,1.59e-13,42;CL:0002057,1.59e-13,42;CL:0002194,9.00e-13,59;CL:0000576,9.00e-13,59;CL:0000040,9.00e-13,59;CL:0000559,9.00e-13,59;CL:0002009,1.13e-11,61;CL:0000839,9.82e-10,66;CL:0000557,2.64e-09,67;CL:0000766,7.24e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.30e-19!448;UBERON:0004120!8.30e-19!448;UBERON:0006603!8.30e-19!448;UBERON:0000062!1.07e-18!511;UBERON:0000468!1.51e-14!659;UBERON:0000467!3.83e-14!625;UBERON:0000480!7.27e-14!626;UBERON:0002050!1.00e-11!605;UBERON:0005423!1.00e-11!605;UBERON:0000923!1.71e-11!604;UBERON:0005291!1.71e-11!604;UBERON:0006598!1.71e-11!604;UBERON:0002532!1.71e-11!604;UBERON:0000922!3.23e-11!612;UBERON:0002405!5.76e-11!115;UBERON:0002371!2.65e-09!80;UBERON:0001474!2.15e-08!86;UBERON:0004119!2.17e-08!169;UBERON:0000925!2.17e-08!169;UBERON:0006595!2.17e-08!169;UBERON:0000481!4.13e-08!347;UBERON:0000077!5.30e-08!130;UBERON:0004765!5.72e-08!101;UBERON:0001434!5.72e-08!101;UBERON:0001007!6.85e-08!155;UBERON:0001555!6.85e-08!155;UBERON:0007026!6.85e-08!155;UBERON:0003104!1.05e-07!238;UBERON:0009142!1.05e-07!238;UBERON:0004921!1.96e-07!129;UBERON:0004185!1.96e-07!129;UBERON:0002204!8.18e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.43e-10,93;UBERON:0002371,9.62e-10,76;UBERON:0004765,1.17e-09,90;UBERON:0000926,3.09e-09,315;UBERON:0004120,3.09e-09,315;UBERON:0006603,3.09e-09,315;UBERON:0001434,3.15e-09,100;UBERON:0001474,6.85e-09,82;UBERON:0002204,1.49e-07,167;UBERON:0004119,3.70e-07,160;UBERON:0000925,3.70e-07,160;UBERON:0006595,3.70e-07,160;UBERON:0000922,9.57e-07,592 | |||
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| ||
|short_description=p2@PPARG | |||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p2@PPARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPARG_5end |
Coexpression cluster: | C2220_CD14_mature_chorionic_adipose_breast_Cardiac_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000397015_5end |
EntrezGene: | PPARG |
HGNC: | 9236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.77e-15 | 48 |
phagocyte | 2.77e-15 | 48 |
classical monocyte | 1.59e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-13 | 42 |
monopoietic cell | 9.00e-13 | 59 |
monocyte | 9.00e-13 | 59 |
monoblast | 9.00e-13 | 59 |
promonocyte | 9.00e-13 | 59 |
macrophage dendritic cell progenitor | 1.13e-11 | 61 |
myeloid lineage restricted progenitor cell | 9.82e-10 | 66 |
granulocyte monocyte progenitor cell | 2.64e-09 | 67 |
myeloid leukocyte | 7.24e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.43e-10 | 93 |
bone marrow | 9.62e-10 | 76 |
skeletal element | 1.17e-09 | 90 |
mesoderm | 3.09e-09 | 315 |
mesoderm-derived structure | 3.09e-09 | 315 |
presumptive mesoderm | 3.09e-09 | 315 |
skeletal system | 3.15e-09 | 100 |
bone element | 6.85e-09 | 82 |
musculoskeletal system | 1.49e-07 | 167 |
endoderm-derived structure | 3.70e-07 | 160 |
endoderm | 3.70e-07 | 160 |
presumptive endoderm | 3.70e-07 | 160 |
embryo | 9.57e-07 | 592 |