FFCP PHASE1:Hg19::chr3:125899701..125899713,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:125899701..125899713,-
|short_description=p6@ALDH1L1
|description=CAGE_peak_6_at_ALDH1L1_5end
|association_with_transcript=-56bp_to_ENST00000393434,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10840 | |EntrezGene=10840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3978 | |HGNC=3978 | ||
|TSSclassifier=strong | |||
|UniProt=O75891,C9JYZ6 | |UniProt=O75891,C9JYZ6 | ||
|association_with_transcript=-56bp_to_ENST00000393434,ENST00000460368_5end | |||
|cluster_id=chr3:125899701..125899713,- | |||
|description=CAGE_peak_6_at_ALDH1L1_5end | |||
|id=chr3:125899701..125899713,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.11e-23;3!CL:0000244;3.48e-17;4!CL:0000731;3.48e-17;4!CL:0000622;1.90e-14;5!CL:0000154;3.97e-12;6!CL:0000136;1.81e-09;13!CL:0000150;3.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,6.25e-24,3;CL:0000244,5.29e-17,4;CL:0000731,5.29e-17,4;CL:0000622,1.36e-14,5;CL:0000154,3.00e-12,6;CL:0000150,2.53e-08,9;CL:0000136,2.91e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.48e-09;1!UBERON:0008801;5.48e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.30e-16;2!DOID:178;1.37e-08;1!DOID:326;1.37e-08;1!DOID:3978;1.37e-08;1!DOID:3394;1.37e-08;1!DOID:5844;1.37e-08;1!DOID:1287;2.22e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.31e-16,2;DOID:178,9.02e-09,1;DOID:326,9.02e-09,1;DOID:3978,9.02e-09,1;DOID:3394,9.02e-09,1;DOID:5844,9.02e-09,1;DOID:1287,1.72e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.39e-57!115;UBERON:0001049!1.52e-37!57;UBERON:0005068!1.52e-37!57;UBERON:0006241!1.52e-37!57;UBERON:0007135!1.52e-37!57;UBERON:0003075!9.72e-33!86;UBERON:0007284!9.72e-33!86;UBERON:0002616!7.04e-32!59;UBERON:0002346!1.38e-30!90;UBERON:0000955!2.31e-28!69;UBERON:0006238!2.31e-28!69;UBERON:0000153!3.55e-28!129;UBERON:0007811!3.55e-28!129;UBERON:0001017!2.12e-27!82;UBERON:0002780!4.08e-27!41;UBERON:0001890!4.08e-27!41;UBERON:0006240!4.08e-27!41;UBERON:0005743!4.86e-27!86;UBERON:0000033!8.42e-27!123;UBERON:0003080!2.98e-26!42;UBERON:0002020!2.53e-23!34;UBERON:0003528!2.53e-23!34;UBERON:0000073!3.70e-23!94;UBERON:0001016!3.70e-23!94;UBERON:0001893!4.22e-23!34;UBERON:0002791!4.67e-22!33;UBERON:0003056!8.45e-22!61;UBERON:0001869!6.32e-21!32;UBERON:0004121!4.21e-19!169;UBERON:0000924!2.95e-18!173;UBERON:0006601!2.95e-18!173;UBERON:0000475!5.11e-16!365;UBERON:0004111!7.97e-16!241;UBERON:0000956!2.83e-15!25;UBERON:0000203!2.83e-15!25;UBERON:0002619!3.48e-14!22;UBERON:0000481!4.48e-14!347;UBERON:0000025!1.13e-13!194;UBERON:0000477!1.63e-13!286;UBERON:0003076!2.59e-12!15;UBERON:0003057!2.59e-12!15;UBERON:0001950!5.80e-12!20;UBERON:0001044!3.41e-11!6;UBERON:0003293!3.41e-11!6;UBERON:0003294!3.41e-11!6;UBERON:0010047!3.41e-11!6;UBERON:0000167!3.41e-11!6;UBERON:0004733!5.71e-11!12;UBERON:0002028!5.71e-11!12;UBERON:0007277!5.71e-11!12;UBERON:0000483!8.79e-11!309;UBERON:0000119!1.72e-10!312;UBERON:0004732!6.05e-10!13;UBERON:0002308!7.45e-10!9;UBERON:0000125!7.45e-10!9;UBERON:0000468!2.73e-09!659;UBERON:0002298!4.82e-09!8;UBERON:0000922!7.27e-09!612;UBERON:0000062!9.84e-09!511;UBERON:0000923!2.13e-08!604;UBERON:0005291!2.13e-08!604;UBERON:0006598!2.13e-08!604;UBERON:0002532!2.13e-08!604;UBERON:0002050!2.45e-08!605;UBERON:0005423!2.45e-08!605;UBERON:0000467!3.41e-08!625;UBERON:0000480!3.92e-08!626;UBERON:0003408!6.92e-08!10;UBERON:0002420!8.18e-08!9;UBERON:0007245!8.18e-08!9;UBERON:0010009!8.18e-08!9;UBERON:0010011!8.18e-08!9;UBERON:0000454!8.18e-08!9;UBERON:0009663!1.34e-07!7;UBERON:0000064!1.35e-07!219;UBERON:0000078!2.12e-07!18;UBERON:0002680!5.85e-07!9;UBERON:0001895!5.85e-07!9;UBERON:0010092!5.85e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.94e-31;6!UBERON:0003293;1.94e-31;6!UBERON:0003294;1.94e-31;6!UBERON:0010047;1.94e-31;6!UBERON:0003408;1.94e-31;6!UBERON:0000167;1.94e-31;6!UBERON:0000365;7.28e-14;5!UBERON:0001041;2.07e-13;14!UBERON:0005910;1.21e-11;6!UBERON:0002365;7.49e-11;31!UBERON:0002330;7.49e-11;31!UBERON:0001896;1.26e-10;3!UBERON:0005290;1.26e-10;3!UBERON:0000161;7.86e-10;19!UBERON:0000166;7.86e-10;19!UBERON:0001831;5.48e-09;1!UBERON:0001567;5.48e-09;1!UBERON:0000996;1.37e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.07e-31,6;UBERON:0003293,1.07e-31,6;UBERON:0003294,1.07e-31,6;UBERON:0010047,1.07e-31,6;UBERON:0000167,1.07e-31,6;UBERON:0003408,5.52e-19,10;UBERON:0000365,1.01e-13,5;UBERON:0005910,1.59e-11,6;UBERON:0002365,4.45e-11,31;UBERON:0002330,4.45e-11,31;UBERON:0001896,1.46e-10,3;UBERON:0005290,1.46e-10,3;UBERON:0010096,1.46e-10,3;UBERON:0001831,6.65e-09,1;UBERON:0001567,6.65e-09,1;UBERON:0008801,6.65e-09,1;UBERON:0000996,1.32e-08,1;UBERON:0000166,1.58e-08,22;UBERON:0007023,3.50e-07,114;UBERON:0000161,4.42e-07,36 | |||
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| ||
|short_description=p6@ALDH1L1 | |||
}} | }} |
Latest revision as of 03:53, 20 September 2015
Short description: | p6@ALDH1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ALDH1L1_5end |
Coexpression cluster: | NA |
Association with transcript: | -56bp_to_ENST00000393434, ENST00000460368_5end |
EntrezGene: | ALDH1L1 |
HGNC: | 3978 |
UniProt: | O75891C9JYZ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 6.25e-24 | 3 |
transitional epithelial cell | 5.29e-17 | 4 |
urothelial cell | 5.29e-17 | 4 |
acinar cell | 1.36e-14 | 5 |
protein secreting cell | 3.00e-12 | 6 |
glandular epithelial cell | 2.53e-08 | 9 |
fat cell | 2.91e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.07e-31 | 6 |
gland of oral region | 1.07e-31 | 6 |
gland of foregut | 1.07e-31 | 6 |
oral gland | 1.07e-31 | 6 |
oral cavity | 1.07e-31 | 6 |
gland of gut | 5.52e-19 | 10 |
urothelium | 1.01e-13 | 5 |
transitional epithelium | 1.59e-11 | 6 |
exocrine gland | 4.45e-11 | 31 |
exocrine system | 4.45e-11 | 31 |
medulla oblongata | 1.46e-10 | 3 |
myelencephalon | 1.46e-10 | 3 |
future myelencephalon | 1.46e-10 | 3 |
parotid gland | 6.65e-09 | 1 |
cheek | 6.65e-09 | 1 |
parotid gland primordium | 6.65e-09 | 1 |
vagina | 1.32e-08 | 1 |
oral opening | 1.58e-08 | 22 |
adult organism | 3.50e-07 | 114 |
orifice | 4.42e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.31e-16 | 2 |
vascular disease | 9.02e-09 | 1 |
ischemia | 9.02e-09 | 1 |
extrinsic cardiomyopathy | 9.02e-09 | 1 |
myocardial ischemia | 9.02e-09 | 1 |
myocardial infarction | 9.02e-09 | 1 |
cardiovascular system disease | 1.72e-08 | 4 |