FFCP PHASE1:Hg19::chr3:139000423..139000454,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:139000423..139000454,+
|short_description=p3@MRPS22
|description=CAGE_peak_3_at_MRPS22_5end
|association_with_transcript=-101bp_to_ENST00000489521_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56945 | |EntrezGene=56945 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14508 | |HGNC=14508 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-101bp_to_ENST00000489521_5end | |||
|cluster_id=chr3:139000423..139000454,+ | |||
|description=CAGE_peak_3_at_MRPS22_5end | |||
|id=chr3:139000423..139000454,+ | |||
|ontology_enrichment_celltype=CL:0002620!1.58e-19!23;CL:0000057!8.17e-19!75;CL:0000055!5.12e-13!180 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.24e-33;23!CL:0002551;1.37e-11;6!CL:0002559;2.40e-10;5!CL:0000057;1.00e-09;73!CL:0000056;1.40e-07;4!CL:0002570;5.07e-07;8!CL:0000346;9.87e-07;3!CL:1000428;9.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.25e-33,23;CL:0000057,8.12e-21,76;CL:0002551,1.14e-11,6;CL:0002559,2.28e-10,5;CL:0000515,1.27e-07,4;CL:0002570,3.79e-07,8;CL:0000346,8.75e-07,3;CL:1000428,8.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;1.40e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060072;4.62e-08;4!DOID:0060084;6.30e-07;3!DOID:127;6.30e-07;3!DOID:17;6.57e-07;5!DOID:450;6.57e-07;5!DOID:66;6.57e-07;5!DOID:423;6.57e-07;5!DOID:0080000;6.57e-07;5!DOID:11722;6.57e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,4.72e-08,4;DOID:0060084,5.85e-07,3;DOID:127,5.85e-07,3;DOID:17,6.54e-07,5;DOID:450,6.54e-07,5;DOID:66,6.54e-07,5;DOID:423,6.54e-07,5;DOID:0080000,6.54e-07,5;DOID:11722,6.54e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.29e-23!45;UBERON:0002416!1.29e-23!45;UBERON:0002097!1.32e-23!40;UBERON:0003102!1.86e-18!95;UBERON:0002067!4.91e-09!9;UBERON:0004016!4.91e-09!9;UBERON:0010083!4.91e-09!9;UBERON:0000475!2.15e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.15e-26;41!UBERON:0002199;2.23e-20;46!UBERON:0002416;2.23e-20;46!UBERON:0003102;2.26e-18;50!UBERON:0002067;1.16e-16;9!UBERON:0002073;2.40e-10;5!UBERON:0000412;9.87e-07;3!UBERON:0001992;9.87e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.73e-34,41;UBERON:0002199,2.84e-34,46;UBERON:0002416,2.84e-34,46;UBERON:0003102,5.78e-18,99;UBERON:0002067,8.66e-17,9;UBERON:0004016,8.66e-17,9;UBERON:0010083,8.66e-17,9;UBERON:0002073,2.28e-10,5;UBERON:0005086,2.28e-10,5;UBERON:0000412,8.75e-07,3;UBERON:0001992,8.75e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0.860509862246441,0.354668382198357,0,0,0,0,0,0,0,0,0.468642863667593,7.49184184392769,1.71141546463335,9.41526687476347,5.04968344168189,11.0073602170329,9.2697532423484,7.34955016517616,0.61417158655884,4.02970546585485,0,0.247266929278557,0.910161361938026,2.87447256726495,2.18836948140286,0.500474079487857,10.2513722729148,0.438977620880838,0.612975591598039,0,0.113432183160021,8.43131287737651,0.640672166455702,4.66250182551036,26.107925359343,9.37778016069794,20.868883743696,5.3973888336161,7.25738228637445,1.07180705677318,46.4478144609171,5.70709371582256,2.58633690910099,20.9455659584802,5.44061330429257,3.56077243852024,0,0,0.573609190778008,0,0,0,0,0,0,7.8224766164908,3.85944562915731,12.4321429217232,8.35862270457562,10.1063127433742,0,0,0.482022059766964,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76145795351963,0.290633938513962,0,0,0,1.03664057770386,0.432359860250884,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0.517086863031111,0,3.381211010224,0,0,0,1.41849132023278,0.799266537048298,0,0,0.823240336780769,2.60588947434988,0,0,1.20575750823834,0.871533458600294,0.99972991182057,0,0,0,0,0,2.85273810081437,1.30303176000821,4.52047909610843,10.206474904674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0.368738337083406,14.7702144595741,0,0,0,0,0,0,0,1.20956117331872,0,0.153461973288062,0,0,0,0.160853921143607,0,6.32259744590888,2.30830242907065,5.66677376495283,0.519254429183621,3.1376802184189,0,0.200506470303285,0.184161977871793,0.459257792658427,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,0,0,1.06337790121334,0.154048617114644,0.307007349452259,1.7918754422989,0.644521469209642,1.45016693914229,0.596586391912706,0.445160178233687,0,0.192190067365106,0.893288987462089,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0.636406495851874,0.78494864019923,0.359744915166629,0,0.117812402345686,0,1.58510321173008,0,0,0,0,7.78049495025519,1.41405431953713,0,0,1.99031692572366,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,2.12856638442359,0,0.987884678879706,2.27683904259429,0.699869440489966,0,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0,0,1.11362469558097,0,0,0.33307196799782,0,0,0,0,0,0.852408440419239,0,0,0.614321404198464,1.9882952955326,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,8.70910845453061,0.449341755736634,0,0,0,0,0,0,1.11321717794222,0,0,0,0,0.1137934482855,0,0,7.58435421131222,2.33283690706603,2.08349993919951,0,0,0,0,0.295547618953547,0,0,0.139423744278603,0.0769502585037971,0.227884111694002,0,0,0.108647371922008,0,0.732780747214898,0,0,0,0,1.35357396370308,1.17637520590644,0.671286347903371,2.27704479269022,0,0,0,0.141353071433941,0,0,0,0,0.593042257361244,0,0,1.21322039365219,0,0,0,0,0,0,0,0.30607276163049,0,1.80388103297391,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.19351266257817,0,0,0,0,0,5.07055121192978,1.19228767021794,0.379864775735272,0,10.2603289921963,0,0,0,0.343609788497747,0.171594997861965,0.720273989940749,0.124252535565433,0.235694034616795,3.39760515184035,3.87030531355633,0.203996435272644,0,0.600420288709789,0.410716136675979,0,2.57859264851974,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0.449947783103001,9.2856234546954,0.364497339948148,0,0,0,0.211200673038813,0,0,0,0,0,10.8599920350743,6.91377192961014,8.49127136284464,0,0.164185041498678,0,2.49286601344276,0,0,1.0342636508924,0.26446520348538,0,0.704815022316672,0,0,0,0,0,0,5.74507131993164,0,0,0,0,0,0,0.244052529803926,0.250381861413,1.72022758707021,0.332787154610557,0.931446044120752,0.415045904808692,0,1.06154382279153,0.856396000634902,0.235265819698172,0.936669811613763,0.144921028610825,1.64180283175561,1.40227985908335,0.554805861502613,2.84104507912634,0,3.55924488638614,0,0.302461847526478,0,0.147855149989634,0.159296767163702,0,0.621051827505038,0,0.265841714557995,7.30443086536427,0.300515217994437,1.90402606084398,6.10306099806992,0.363697318405119,0.429642228169954,0,0.398095888698616,0,2.40376993627955,2.69399591012735,0,0,0,0.521988583930423,3.62729480819636,4.86197196080051,0,1.25362188757041,0.308801447160972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| ||
|short_description=p3@MRPS22 | |||
}} | }} |
Latest revision as of 01:37, 25 September 2015
Short description: | p3@MRPS22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MRPS22_5end |
Coexpression cluster: | NA |
Association with transcript: | -101bp_to_ENST00000489521_5end |
EntrezGene: | MRPS22 |
HGNC: | 14508 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.25e-33 | 23 |
fibroblast | 8.12e-21 | 76 |
fibroblast of dermis | 1.14e-11 | 6 |
hair follicle cell | 2.28e-10 | 5 |
skeletal muscle myoblast | 1.27e-07 | 4 |
mesenchymal stem cell of adipose | 3.79e-07 | 8 |
hair follicle dermal papilla cell | 8.75e-07 | 3 |
stem cell of epidermis | 8.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.73e-34 | 41 |
integument | 2.84e-34 | 46 |
integumental system | 2.84e-34 | 46 |
surface structure | 5.78e-18 | 99 |
dermis | 8.66e-17 | 9 |
dermatome | 8.66e-17 | 9 |
future dermis | 8.66e-17 | 9 |
hair follicle | 2.28e-10 | 5 |
hair follicle placode | 2.28e-10 | 5 |
dermal papilla | 8.75e-07 | 3 |
papillary layer of dermis | 8.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 4.72e-08 | 4 |
cell type benign neoplasm | 5.85e-07 | 3 |
leiomyoma | 5.85e-07 | 3 |
musculoskeletal system disease | 6.54e-07 | 5 |
myotonic disease | 6.54e-07 | 5 |
muscle tissue disease | 6.54e-07 | 5 |
myopathy | 6.54e-07 | 5 |
muscular disease | 6.54e-07 | 5 |
myotonic dystrophy | 6.54e-07 | 5 |