FFCP PHASE1:Hg19::chr3:149086808..149086812,+: Difference between revisions
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|id=chr3:149086808..149086812,+
|short_description=p@chr3:149086808..149086812,+
|description=CAGE_peak_at_chr3:149086808..149086812,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:149086808..149086812,+ | |||
|description=CAGE_peak_at_chr3:149086808..149086812,+ | |||
|id=chr3:149086808..149086812,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.01e-08!24;CL:0002494!2.70e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002592;7.01e-15;3!CL:0002557;8.62e-12;1!CL:0002379;8.62e-12;1!CL:0002595;1.87e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,9.30e-15,3;CL:0002379,5.62e-12,1;CL:0002557,1.07e-11,1;CL:0002595,1.76e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.08e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3620;8.62e-12;1!DOID:3565;8.62e-12;1!DOID:5662;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,5.62e-12,1;DOID:3565,5.62e-12,1;DOID:5662,1.63e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.45e-11!9;UBERON:0003104!8.22e-09!238;UBERON:0009142!8.22e-09!238;UBERON:0000926!1.59e-07!448;UBERON:0004120!1.59e-07!448;UBERON:0006603!1.59e-07!448;UBERON:0004872!5.45e-07!84;UBERON:0000477!6.73e-07!286;UBERON:0000055!7.97e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;7.01e-15;3!UBERON:0005985;7.01e-15;3!UBERON:0001621;7.01e-15;3!UBERON:0007195;3.45e-12;1!UBERON:0003834;1.87e-09;5!UBERON:0001533;1.87e-09;5!UBERON:0003513;5.42e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003498,3.38e-19,5;UBERON:0005985,3.38e-19,5;UBERON:0001621,9.30e-15,3;UBERON:0007195,3.27e-12,1;UBERON:0003834,1.76e-09,5;UBERON:0001533,1.76e-09,5;UBERON:0000948,4.18e-07,24;UBERON:0005498,4.18e-07,24;UBERON:0004140,4.18e-07,24;UBERON:0009881,4.18e-07,24;UBERON:0004141,4.18e-07,24;UBERON:0003084,4.18e-07,24;UBERON:0007005,4.18e-07,24;UBERON:0004139,4.18e-07,24;UBERON:0004291,4.18e-07,24;UBERON:0003513,5.19e-07,7;UBERON:0000055,5.95e-07,68 | |||
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| ||
|short_description=p@chr3:149086808..149086812,+ | |||
}} | }} |
Latest revision as of 16:51, 29 July 2015
Short description: | p@chr3:149086808..149086812, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:149086808..149086812, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 9.30e-15 | 3 |
meningothelial cell | 5.62e-12 | 1 |
fibroblast of pulmonary artery | 1.07e-11 | 1 |
smooth muscle cell of the subclavian artery | 1.76e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
heart blood vessel | 3.38e-19 | 5 |
coronary vessel | 3.38e-19 | 5 |
coronary artery | 9.30e-15 | 3 |
stroma of bone marrow | 3.27e-12 | 1 |
thoracic segment blood vessel | 1.76e-09 | 5 |
subclavian artery | 1.76e-09 | 5 |
heart | 4.18e-07 | 24 |
primitive heart tube | 4.18e-07 | 24 |
primary heart field | 4.18e-07 | 24 |
anterior lateral plate mesoderm | 4.18e-07 | 24 |
heart tube | 4.18e-07 | 24 |
heart primordium | 4.18e-07 | 24 |
cardiac mesoderm | 4.18e-07 | 24 |
cardiogenic plate | 4.18e-07 | 24 |
heart rudiment | 4.18e-07 | 24 |
trunk blood vessel | 5.19e-07 | 7 |
vessel | 5.95e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 5.62e-12 | 1 |
meningioma | 5.62e-12 | 1 |
pleomorphic carcinoma | 1.63e-11 | 1 |