FFCP PHASE1:Hg19::chr14:34420212..34420219,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112399 | |EntrezGene=112399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14661 | |HGNC=14661 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H6Z9 | |UniProt=Q9H6Z9 | ||
|association_with_transcript=64bp_to_ENST00000539567,NM_022073,uc001wrz.2,uc001wsa.3_5end | |association_with_transcript=64bp_to_ENST00000539567,NM_022073,uc001wrz.2,uc001wsa.3_5end | ||
|cluster_id=chr14:34420212..34420219,- | |||
|coexpression_cluster_id=C3423 | |coexpression_cluster_id=C3423 | ||
|description=CAGE_peak_3_at_EGLN3_5end | |description=CAGE_peak_3_at_EGLN3_5end | ||
Latest revision as of 18:35, 19 September 2015
| Short description: | p3@EGLN3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_EGLN3_5end |
| Coexpression cluster: | C3423_chorionic_renal_amniotic_breast_Urothelial_heart_colon |
| Association with transcript: | 64bp_to_ENST00000539567, NM_022073, uc001wrz.2, uc001wsa.3_5end |
| EntrezGene: | EGLN3 |
| HGNC: | 14661 |
| UniProt: | Q9H6Z9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@EGLN3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| plasmacytoid dendritic cell | 1.25e-14 | 3 |
| chorionic membrane mesenchymal stem cell | 1.37e-14 | 3 |
| dendritic cell | 1.53e-14 | 10 |
| immature conventional dendritic cell | 1.69e-12 | 5 |
| common dendritic progenitor | 1.69e-12 | 5 |
| transitional epithelial cell | 5.87e-11 | 4 |
| urothelial cell | 5.87e-11 | 4 |
| conventional dendritic cell | 2.36e-08 | 8 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| egg chorion | 1.37e-14 | 3 |
| urothelium | 7.47e-09 | 5 |
| extraembryonic membrane | 2.96e-08 | 14 |
| membranous layer | 2.96e-08 | 14 |
| transitional epithelium | 1.91e-07 | 6 |
| cardiac chamber | 9.92e-07 | 3 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| heart disease | 6.65e-10 | 2 |
| clear cell adenocarcinoma | 8.72e-10 | 2 |
Showing 1 to 2 of 2 entries
