FFCP PHASE1:Hg19::chr4:23886550..23886561,-: Difference between revisions
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|id=chr4:23886550..23886561,-
|short_description=p8@PPARGC1A
|description=CAGE_peak_8_at_PPARGC1A_5end
|association_with_transcript=0bp_to_ENST00000503714_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10891 | |EntrezGene=10891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9237 | |HGNC=9237 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503714_5end | |||
|cluster_id=chr4:23886550..23886561,- | |||
|description=CAGE_peak_8_at_PPARGC1A_5end | |||
|id=chr4:23886550..23886561,- | |||
|ontology_enrichment_celltype=CL:0000317!2.70e-07!2;CL:1000448!2.70e-07!2;CL:0002308!2.70e-07!2;CL:0002140!2.70e-07!2;CL:0002617!3.86e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.49e-38;3!CL:0000149;3.16e-29;4!CL:0000147;4.21e-09;14!CL:0000312;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.49e-38,3;CL:0000149,3.16e-29,4;CL:0000147,4.21e-09,14;CL:0000312,6.39e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.98e-11;11!UBERON:0009497;1.13e-09;13!UBERON:0003104;3.18e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002419!2.70e-07!2;UBERON:0007771!2.70e-07!2;UBERON:0003297!2.70e-07!2;UBERON:0001821!2.70e-07!2;UBERON:0003487!2.70e-07!2;UBERON:0001820!2.70e-07!2;UBERON:0005089!2.70e-07!2;UBERON:0005088!2.70e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.49e-38;3!UBERON:0001782;1.49e-38;3!UBERON:0001282;2.37e-29;1!UBERON:0009842;2.37e-29;1!UBERON:0003704;2.37e-29;1!UBERON:0001171;2.37e-29;1!UBERON:0001172;2.37e-29;1!UBERON:0000966;1.28e-23;5!UBERON:0005388;1.28e-23;5!UBERON:0001802;1.28e-23;5!UBERON:0007625;2.55e-11;11!UBERON:0001280;9.90e-11;3!UBERON:0004647;9.90e-11;3!UBERON:0002394;2.26e-08;4!UBERON:0003928;2.26e-08;4!UBERON:0010371;2.61e-08;31!UBERON:0000019;6.01e-07;19!UBERON:0000047;6.01e-07;19!UBERON:0004088;6.01e-07;19!UBERON:0010230;6.01e-07;19!UBERON:0002107;6.57e-07;19!UBERON:0006925;6.57e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.49e-38,3;UBERON:0005424,1.49e-38,3;UBERON:0001781,3.16e-29,4;UBERON:0001282,4.20e-29,1;UBERON:0009842,4.20e-29,1;UBERON:0003704,4.20e-29,1;UBERON:0001171,4.20e-29,1;UBERON:0001172,4.20e-29,1;UBERON:0000966,7.13e-20,6;UBERON:0005388,7.13e-20,6;UBERON:0001802,7.13e-20,6;UBERON:0007625,2.55e-11,11;UBERON:0001280,1.20e-10,3;UBERON:0004647,1.20e-10,3;UBERON:0005171,1.20e-10,3;UBERON:0002107,6.77e-07,19;UBERON:0006925,6.77e-07,19;UBERON:0008836,6.77e-07,19 | |||
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|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20725313949488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,1.28225062558195,0,2.92840555197873,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,1.02547850262301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,3.38864541386552,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0.215927591218621,0,0.500335809236594,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@PPARGC1A | |||
}} | }} |
Latest revision as of 09:16, 17 September 2015
Short description: | p8@PPARGC1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PPARGC1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503714_5end |
EntrezGene: | PPARGC1A |
HGNC: | 9237 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.49e-38 | 3 |
visual pigment cell | 3.16e-29 | 4 |
pigment cell | 4.21e-09 | 14 |
keratinocyte | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.49e-38 | 3 |
presumptive retinal pigmented epithelium | 1.49e-38 | 3 |
layer of retina | 3.16e-29 | 4 |
intralobular bile duct | 4.20e-29 | 1 |
acinus | 4.20e-29 | 1 |
intrahepatic bile duct | 4.20e-29 | 1 |
portal lobule | 4.20e-29 | 1 |
hepatic acinus | 4.20e-29 | 1 |
retina | 7.13e-20 | 6 |
photoreceptor array | 7.13e-20 | 6 |
posterior segment of eyeball | 7.13e-20 | 6 |
pigment epithelium of eye | 2.55e-11 | 11 |
liver parenchyma | 1.20e-10 | 3 |
liver lobule | 1.20e-10 | 3 |
hepatic duct | 1.20e-10 | 3 |
liver | 6.77e-07 | 19 |
digestive gland | 6.77e-07 | 19 |
liver bud | 6.77e-07 | 19 |